RNA–Protein interactions for RNA: ENST00000304004.7

POLR1C-201, Transcript of RNA polymerase I and III subunit C, humanhuman

TSL 1 (best) BASIC

Gene POLR1C, Length 1,280 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1C-201ENST00000304004 CABP2Q9NPB3 220 aa22.9■■□□□ 1.26
POLR1C-201ENST00000304004 NWD2Q9ULI1 1742 aa22.9■■□□□ 1.26
POLR1C-201ENST00000304004 SLC24A1O60721 1099 aa22.89■■□□□ 1.25
POLR1C-201ENST00000304004 PLEKHG3A1L390 1219 aa22.87■■□□□ 1.25
POLR1C-201ENST00000304004 USP47Q96K76 1375 aa22.87■■□□□ 1.25
POLR1C-201ENST00000304004 ACEP12821 1306 aa22.86■■□□□ 1.25
POLR1C-201ENST00000304004 PIK3C2AO00443 1686 aa22.86■■□□□ 1.25
POLR1C-201ENST00000304004 ATAD2Q6PL18 1390 aa22.86■■□□□ 1.25
POLR1C-201ENST00000304004 ADAMTS2O95450 1211 aa22.85■■□□□ 1.25
POLR1C-201ENST00000304004 AFF2P51816 1311 aa22.83■■□□□ 1.25
POLR1C-201ENST00000304004 NRAPQ86VF7 1730 aa22.83■■□□□ 1.25
POLR1C-201ENST00000304004 C8orf37Q96NL8 207 aa22.83■■□□□ 1.25
POLR1C-201ENST00000304004 COL14A1Q05707 1796 aaKnown RBP22.83■■□□□ 1.24
POLR1C-201ENST00000304004 ZNF772Q68DY9 489 aaPredicted RBP22.82■■□□□ 1.24
POLR1C-201ENST00000304004 LMOD2Q6P5Q4 547 aa22.82■■□□□ 1.24
POLR1C-201ENST00000304004 USP6P35125 1406 aa22.82■■□□□ 1.24
POLR1C-201ENST00000304004 POTEAQ6S8J7 498 aa22.81■■□□□ 1.24
POLR1C-201ENST00000304004 USP54Q70EL1 1684 aa22.81■■□□□ 1.24
POLR1C-201ENST00000304004 BRD4O60885 1362 aaPredicted RBP22.8■■□□□ 1.24
POLR1C-201ENST00000304004 MYOM1P52179 1685 aa22.8■■□□□ 1.24
POLR1C-201ENST00000304004 ST20-MTHFSA0A0A6YYL1 179 aa22.79■■□□□ 1.24
POLR1C-201ENST00000304004 PAK3O75914 559 aaPredicted RBP22.79■■□□□ 1.24
POLR1C-201ENST00000304004 TESK2Q96S53 571 aa22.79■■□□□ 1.24
POLR1C-201ENST00000304004 CABP1Q9NZU7 370 aa22.78■■□□□ 1.24
POLR1C-201ENST00000304004 NGLY1Q96IV0 654 aa22.77■■□□□ 1.24
POLR1C-201ENST00000304004 CPSF1Q10570 1443 aaKnown RBP22.76■■□□□ 1.23
POLR1C-201ENST00000304004 HAP1P54257 671 aaPredicted RBP22.76■■□□□ 1.23
POLR1C-201ENST00000304004 CABLES1Q8TDN4 633 aa22.76■■□□□ 1.23
POLR1C-201ENST00000304004 SLIT2O94813 1529 aa22.76■■□□□ 1.23
POLR1C-201ENST00000304004 SSH2Q76I76 1423 aa22.75■■□□□ 1.23
POLR1C-201ENST00000304004 RTN4Q9NQC3 1192 aaKnown RBP22.75■■□□□ 1.23
POLR1C-201ENST00000304004 CD163L1Q9NR16 1453 aa22.74■■□□□ 1.23
POLR1C-201ENST00000304004 AMER1Q5JTC6 1135 aaPredicted RBP22.74■■□□□ 1.23
POLR1C-201ENST00000304004 CDK12Q9NYV4 1490 aaPredicted RBP22.73■■□□□ 1.23
POLR1C-201ENST00000304004 PLEKHG5O94827 1062 aa22.73■■□□□ 1.23
POLR1C-201ENST00000304004 FNBP4Q8N3X1 1017 aaPredicted RBP22.73■■□□□ 1.23
POLR1C-201ENST00000304004 BCL9LQ86UU0 1499 aa22.73■■□□□ 1.23
POLR1C-201ENST00000304004 SLIT3O75094 1523 aa22.72■■□□□ 1.23
POLR1C-201ENST00000304004 PUS7Q96PZ0 661 aaKnown RBP22.72■■□□□ 1.23
POLR1C-201ENST00000304004 NINLQ9Y2I6 1382 aa22.72■■□□□ 1.23
POLR1C-201ENST00000304004 ATRNO75882 1429 aa22.72■■□□□ 1.23
POLR1C-201ENST00000304004 KIF20BQ96Q89 1820 aa22.71■■□□□ 1.23
POLR1C-201ENST00000304004 MSH5O43196 834 aa22.71■■□□□ 1.23
POLR1C-201ENST00000304004 MAPK8IP2Q13387 824 aaPredicted RBP22.71■■□□□ 1.23
POLR1C-201ENST00000304004 RNF216Q9NWF9 866 aaPredicted RBP22.71■■□□□ 1.23
POLR1C-201ENST00000304004 USP21Q9UK80 565 aa22.7■■□□□ 1.22
POLR1C-201ENST00000304004 KTN1Q86UP2 1357 aaKnown RBP22.7■■□□□ 1.22
POLR1C-201ENST00000304004 LMO7Q8WWI1 1683 aa22.7■■□□□ 1.22
POLR1C-201ENST00000304004 LTN1O94822 1766 aa22.69■■□□□ 1.22
POLR1C-201ENST00000304004 USP19O94966 1318 aa22.69■■□□□ 1.22
POLR1C-201ENST00000304004 RGPD5Q99666 1765 aa22.68■■□□□ 1.22
POLR1C-201ENST00000304004 GLI3P10071 1580 aa22.68■■□□□ 1.22
POLR1C-201ENST00000304004 ABTB2Q8N961 1025 aa22.68■■□□□ 1.22
POLR1C-201ENST00000304004 SOCS7O14512 581 aa22.67■■□□□ 1.22
POLR1C-201ENST00000304004 NUTM2GQ5VZR2 741 aa22.67■■□□□ 1.22
POLR1C-201ENST00000304004 ZNF692Q9BU19 519 aaPredicted RBP22.67■■□□□ 1.22
POLR1C-201ENST00000304004 BRWD3Q6RI45 1802 aa22.66■■□□□ 1.22
POLR1C-201ENST00000304004 A0A1W2PP64 1363 aa22.66■■□□□ 1.22
POLR1C-201ENST00000304004 TMF1P82094 1093 aa22.66■■□□□ 1.22
POLR1C-201ENST00000304004 EDC4Q6P2E9 1401 aaKnown RBP22.65■■□□□ 1.22
POLR1C-201ENST00000304004 TTC21AQ8NDW8 1320 aa22.65■■□□□ 1.22
POLR1C-201ENST00000304004 TMC1Q8TDI8 760 aa22.65■■□□□ 1.22
POLR1C-201ENST00000304004 QTRT2Q9H974 415 aaKnown RBP22.65■■□□□ 1.22
POLR1C-201ENST00000304004 TRPC5Q9UL62 973 aaPredicted RBP22.65■■□□□ 1.22
POLR1C-201ENST00000304004 RGS12O14924 1447 aa22.65■■□□□ 1.22
POLR1C-201ENST00000304004 TTC21BQ7Z4L5 1316 aa22.64■■□□□ 1.22
POLR1C-201ENST00000304004 COL18A1P39060 1754 aa22.64■■□□□ 1.22
POLR1C-201ENST00000304004 RXRBP28702 533 aa22.64■■□□□ 1.21
POLR1C-201ENST00000304004 NLRP13Q86W25 1043 aa22.63■■□□□ 1.21
POLR1C-201ENST00000304004 KIAA0232Q92628 1395 aa22.63■■□□□ 1.21
POLR1C-201ENST00000304004 NFAT5O94916 1531 aa22.62■■□□□ 1.21
POLR1C-201ENST00000304004 RBM6P78332 1123 aaKnown RBP22.62■■□□□ 1.21
POLR1C-201ENST00000304004 HDGFL2Q7Z4V5 671 aaPredicted RBP22.62■■□□□ 1.21
POLR1C-201ENST00000304004 UNC5CLQ8IV45 518 aa22.62■■□□□ 1.21
POLR1C-201ENST00000304004 SLC12A5Q9H2X9 1139 aa22.62■■□□□ 1.21
POLR1C-201ENST00000304004 PRDM11Q9NQV5 511 aa22.61■■□□□ 1.21
POLR1C-201ENST00000304004 TERF2IPQ9NYB0 399 aa22.61■■□□□ 1.21
POLR1C-201ENST00000304004 CPDO75976 1380 aa22.61■■□□□ 1.21
POLR1C-201ENST00000304004 WNK3Q9BYP7 1800 aa22.6■■□□□ 1.21
POLR1C-201ENST00000304004 FAM83GA6ND36 823 aa22.6■■□□□ 1.21
POLR1C-201ENST00000304004 CDCA8Q53HL2 280 aa22.6■■□□□ 1.21
POLR1C-201ENST00000304004 EIF4G2P78344 907 aaKnown RBP eCLIP22.59■■□□□ 1.21
POLR1C-201ENST00000304004 ANKRD36BQ8N2N9 1353 aa22.59■■□□□ 1.21
POLR1C-201ENST00000304004 NLRP6P59044 892 aa22.58■■□□□ 1.21
POLR1C-201ENST00000304004 ABCC6O95255 1503 aa22.57■■□□□ 1.2
POLR1C-201ENST00000304004 CAMTA1Q9Y6Y1 1673 aa22.57■■□□□ 1.2
POLR1C-201ENST00000304004 ANKRD26Q9UPS8 1709 aa22.57■■□□□ 1.2
POLR1C-201ENST00000304004 HSPA5P11021 654 aaKnown RBP22.56■■□□□ 1.2
POLR1C-201ENST00000304004 OVOS2A0A0J9YW53 1432 aa22.56■■□□□ 1.2
POLR1C-201ENST00000304004 OVOS2Q6IE36 1432 aa22.56■■□□□ 1.2
POLR1C-201ENST00000304004 USP31Q70CQ4 1352 aa22.55■■□□□ 1.2
POLR1C-201ENST00000304004 GCP02774 474 aa22.55■■□□□ 1.2
POLR1C-201ENST00000304004 ZC3H6P61129 1189 aaKnown RBP22.55■■□□□ 1.2
POLR1C-201ENST00000304004 BTG4Q9NY30 223 aa22.55■■□□□ 1.2
POLR1C-201ENST00000304004 THSD7AQ9UPZ6 1657 aa22.55■■□□□ 1.2
POLR1C-201ENST00000304004 VPS72Q15906 364 aa22.54■■□□□ 1.2
POLR1C-201ENST00000304004 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.54■■□□□ 1.2
POLR1C-201ENST00000304004 CHRNA2Q15822 529 aa22.53■■□□□ 1.2
POLR1C-201ENST00000304004 GJD4Q96KN9 370 aaPredicted RBP22.53■■□□□ 1.2
POLR1C-201ENST00000304004 NME9Q86XW9 330 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms