RNA–Protein interactions for RNA: ENST00000303553.5

NDUFA3-201, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 2 BASIC

Gene NDUFA3, Length 379 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-201ENST00000303553 AFF2P51816 1311 aa23.76■■□□□ 1.39
NDUFA3-201ENST00000303553 NGLY1Q96IV0 654 aa23.75■■□□□ 1.39
NDUFA3-201ENST00000303553 TESK2Q96S53 571 aa23.75■■□□□ 1.39
NDUFA3-201ENST00000303553 USP6P35125 1406 aa23.75■■□□□ 1.39
NDUFA3-201ENST00000303553 CRYBG1Q9Y4K1 1723 aa23.74■■□□□ 1.39
NDUFA3-201ENST00000303553 ILDR2Q71H61 639 aa23.74■■□□□ 1.39
NDUFA3-201ENST00000303553 ZNF692Q9BU19 519 aaPredicted RBP23.74■■□□□ 1.39
NDUFA3-201ENST00000303553 NINLQ9Y2I6 1382 aa23.73■■□□□ 1.39
NDUFA3-201ENST00000303553 TMF1P82094 1093 aa23.72■■□□□ 1.39
NDUFA3-201ENST00000303553 MON2Q7Z3U7 1717 aa23.71■■□□□ 1.39
NDUFA3-201ENST00000303553 PHRF1Q9P1Y6 1649 aaKnown RBP23.71■■□□□ 1.39
NDUFA3-201ENST00000303553 CDCA8Q53HL2 280 aa23.71■■□□□ 1.39
NDUFA3-201ENST00000303553 POTEAQ6S8J7 498 aa23.69■■□□□ 1.38
NDUFA3-201ENST00000303553 FNBP4Q8N3X1 1017 aaPredicted RBP23.69■■□□□ 1.38
NDUFA3-201ENST00000303553 ABTB2Q8N961 1025 aa23.69■■□□□ 1.38
NDUFA3-201ENST00000303553 CABLES1Q8TDN4 633 aa23.69■■□□□ 1.38
NDUFA3-201ENST00000303553 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.69■■□□□ 1.38
NDUFA3-201ENST00000303553 NRKQ7Z2Y5 1582 aa23.69■■□□□ 1.38
NDUFA3-201ENST00000303553 CPSF1Q10570 1443 aaKnown RBP23.68■■□□□ 1.38
NDUFA3-201ENST00000303553 NWD2Q9ULI1 1742 aa23.68■■□□□ 1.38
NDUFA3-201ENST00000303553 PLEKHG5O94827 1062 aa23.68■■□□□ 1.38
NDUFA3-201ENST00000303553 TMC1Q8TDI8 760 aa23.68■■□□□ 1.38
NDUFA3-201ENST00000303553 KTN1Q86UP2 1357 aaKnown RBP23.67■■□□□ 1.38
NDUFA3-201ENST00000303553 PLCH1Q4KWH8 1693 aa23.67■■□□□ 1.38
NDUFA3-201ENST00000303553 USP21Q9UK80 565 aa23.67■■□□□ 1.38
NDUFA3-201ENST00000303553 EIF4G2P78344 907 aaKnown RBP eCLIP23.66■■□□□ 1.38
NDUFA3-201ENST00000303553 HDGFL2Q7Z4V5 671 aaPredicted RBP23.66■■□□□ 1.38
NDUFA3-201ENST00000303553 TERF2IPQ9NYB0 399 aa23.66■■□□□ 1.38
NDUFA3-201ENST00000303553 SSH2Q76I76 1423 aa23.66■■□□□ 1.38
NDUFA3-201ENST00000303553 COL14A1Q05707 1796 aaKnown RBP23.65■■□□□ 1.38
NDUFA3-201ENST00000303553 TTC21AQ8NDW8 1320 aa23.65■■□□□ 1.38
NDUFA3-201ENST00000303553 NLRP13Q86W25 1043 aa23.65■■□□□ 1.38
NDUFA3-201ENST00000303553 SLIT2O94813 1529 aa23.64■■□□□ 1.38
NDUFA3-201ENST00000303553 PIK3C2AO00443 1686 aa23.64■■□□□ 1.38
NDUFA3-201ENST00000303553 TRPC5Q9UL62 973 aaPredicted RBP23.63■■□□□ 1.37
NDUFA3-201ENST00000303553 CD163L1Q9NR16 1453 aa23.62■■□□□ 1.37
NDUFA3-201ENST00000303553 RXRBP28702 533 aa23.62■■□□□ 1.37
NDUFA3-201ENST00000303553 QTRT2Q9H974 415 aaKnown RBP23.62■■□□□ 1.37
NDUFA3-201ENST00000303553 BCL9LQ86UU0 1499 aa23.62■■□□□ 1.37
NDUFA3-201ENST00000303553 USP19O94966 1318 aa23.61■■□□□ 1.37
NDUFA3-201ENST00000303553 NUTM2GQ5VZR2 741 aa23.61■■□□□ 1.37
NDUFA3-201ENST00000303553 SLC12A5Q9H2X9 1139 aa23.61■■□□□ 1.37
NDUFA3-201ENST00000303553 CDK12Q9NYV4 1490 aaPredicted RBP23.61■■□□□ 1.37
NDUFA3-201ENST00000303553 TTC21BQ7Z4L5 1316 aa23.6■■□□□ 1.37
NDUFA3-201ENST00000303553 EDC4Q6P2E9 1401 aaKnown RBP23.6■■□□□ 1.37
NDUFA3-201ENST00000303553 ATRNO75882 1429 aa23.59■■□□□ 1.37
NDUFA3-201ENST00000303553 RBM6P78332 1123 aaKnown RBP23.59■■□□□ 1.37
NDUFA3-201ENST00000303553 A0A1W2PP64 1363 aa23.59■■□□□ 1.37
NDUFA3-201ENST00000303553 NLRP6P59044 892 aa23.58■■□□□ 1.37
NDUFA3-201ENST00000303553 UNC5CLQ8IV45 518 aa23.58■■□□□ 1.37
NDUFA3-201ENST00000303553 PRDM11Q9NQV5 511 aa23.58■■□□□ 1.37
NDUFA3-201ENST00000303553 SLIT3O75094 1523 aa23.58■■□□□ 1.36
NDUFA3-201ENST00000303553 SOCS7O14512 581 aa23.57■■□□□ 1.36
NDUFA3-201ENST00000303553 USP54Q70EL1 1684 aa23.57■■□□□ 1.36
NDUFA3-201ENST00000303553 NRAPQ86VF7 1730 aa23.56■■□□□ 1.36
NDUFA3-201ENST00000303553 ANKRD36BQ8N2N9 1353 aa23.56■■□□□ 1.36
NDUFA3-201ENST00000303553 HSPA5P11021 654 aaKnown RBP23.56■■□□□ 1.36
NDUFA3-201ENST00000303553 CPDO75976 1380 aa23.55■■□□□ 1.36
NDUFA3-201ENST00000303553 KIAA0232Q92628 1395 aa23.55■■□□□ 1.36
NDUFA3-201ENST00000303553 MYOM1P52179 1685 aa23.55■■□□□ 1.36
NDUFA3-201ENST00000303553 FAM83GA6ND36 823 aa23.55■■□□□ 1.36
NDUFA3-201ENST00000303553 GCP02774 474 aa23.53■■□□□ 1.36
NDUFA3-201ENST00000303553 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.52■■□□□ 1.36
NDUFA3-201ENST00000303553 KCNH5Q8NCM2 988 aa23.52■■□□□ 1.36
NDUFA3-201ENST00000303553 BTG4Q9NY30 223 aa23.52■■□□□ 1.36
NDUFA3-201ENST00000303553 ZC3H6P61129 1189 aaKnown RBP23.51■■□□□ 1.35
NDUFA3-201ENST00000303553 USP31Q70CQ4 1352 aa23.51■■□□□ 1.35
NDUFA3-201ENST00000303553 VPS72Q15906 364 aa23.5■■□□□ 1.35
NDUFA3-201ENST00000303553 GJD4Q96KN9 370 aaPredicted RBP23.5■■□□□ 1.35
NDUFA3-201ENST00000303553 LMO7Q8WWI1 1683 aa23.48■■□□□ 1.35
NDUFA3-201ENST00000303553 RGS12O14924 1447 aa23.48■■□□□ 1.35
NDUFA3-201ENST00000303553 CCDC9Q9Y3X0 531 aaKnown RBP23.47■■□□□ 1.35
NDUFA3-201ENST00000303553 GLI3P10071 1580 aa23.47■■□□□ 1.35
NDUFA3-201ENST00000303553 CHRNA2Q15822 529 aa23.46■■□□□ 1.35
NDUFA3-201ENST00000303553 NME9Q86XW9 330 aa23.46■■□□□ 1.35
NDUFA3-201ENST00000303553 NFAT5O94916 1531 aa23.45■■□□□ 1.34
NDUFA3-201ENST00000303553 KIF20BQ96Q89 1820 aa23.45■■□□□ 1.34
NDUFA3-201ENST00000303553 ABCC6O95255 1503 aa23.44■■□□□ 1.34
NDUFA3-201ENST00000303553 OVOS2A0A0J9YW53 1432 aa23.44■■□□□ 1.34
NDUFA3-201ENST00000303553 OVOS2Q6IE36 1432 aa23.44■■□□□ 1.34
NDUFA3-201ENST00000303553 AATKQ6ZMQ8 1374 aa23.43■■□□□ 1.34
NDUFA3-201ENST00000303553 POLR3GLQ9BT43 218 aa23.43■■□□□ 1.34
NDUFA3-201ENST00000303553 CAMTA1Q9Y6Y1 1673 aa23.41■■□□□ 1.34
NDUFA3-201ENST00000303553 EVA1CP58658 441 aa23.41■■□□□ 1.34
NDUFA3-201ENST00000303553 LTN1O94822 1766 aa23.41■■□□□ 1.34
NDUFA3-201ENST00000303553 ZBTB7CA1YPR0 619 aa23.4■■□□□ 1.34
NDUFA3-201ENST00000303553 SOX12O15370 315 aa23.4■■□□□ 1.34
NDUFA3-201ENST00000303553 COG3Q96JB2 828 aa23.4■■□□□ 1.34
NDUFA3-201ENST00000303553 COL18A1P39060 1754 aa23.4■■□□□ 1.34
NDUFA3-201ENST00000303553 COL5A2P05997 1499 aaPredicted RBP23.39■■□□□ 1.34
NDUFA3-201ENST00000303553 ARHGEF25Q86VW2 580 aa23.39■■□□□ 1.33
NDUFA3-201ENST00000303553 STRN4Q9NRL3 753 aa23.39■■□□□ 1.33
NDUFA3-201ENST00000303553 SPATA31A5Q5VU36 1347 aa23.38■■□□□ 1.33
NDUFA3-201ENST00000303553 SPATA31A7Q8IWB4 1347 aa23.38■■□□□ 1.33
NDUFA3-201ENST00000303553 ZRANB1Q9UGI0 708 aa23.38■■□□□ 1.33
NDUFA3-201ENST00000303553 NSD3Q9BZ95 1437 aa23.38■■□□□ 1.33
NDUFA3-201ENST00000303553 SPATA31A1Q5TZJ5 1347 aa23.34■■□□□ 1.33
NDUFA3-201ENST00000303553 ONECUT3O60422 494 aaPredicted RBP23.34■■□□□ 1.33
NDUFA3-201ENST00000303553 RGPD5Q99666 1765 aa23.34■■□□□ 1.33
NDUFA3-201ENST00000303553 CGNL1Q0VF96 1302 aa23.33■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms