RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 BACH2Q9BYV9 841 aa16.72■□□□□ 0.27
PRKCB-201ENST00000303531 C9orf84Q5VXU9 1444 aa16.72■□□□□ 0.27
PRKCB-201ENST00000303531 LETM1O95202 739 aaPredicted RBP16.72■□□□□ 0.27
PRKCB-201ENST00000303531 SYNJ1O43426 1573 aa16.72■□□□□ 0.27
PRKCB-201ENST00000303531 SYNJ2O15056 1496 aa16.72■□□□□ 0.27
PRKCB-201ENST00000303531 EHBP1L1Q8N3D4 1523 aa16.72■□□□□ 0.27
PRKCB-201ENST00000303531 PDILTQ8N807 584 aa16.72■□□□□ 0.27
PRKCB-201ENST00000303531 BRMS1Q9HCU9 246 aa16.72■□□□□ 0.27
PRKCB-201ENST00000303531 NAP1L1P55209 391 aaKnown RBP16.71■□□□□ 0.27
PRKCB-201ENST00000303531 RBM33Q96EV2 1170 aaKnown RBP16.71■□□□□ 0.27
PRKCB-201ENST00000303531 TSPY26PQ9H489 355 aa16.71■□□□□ 0.27
PRKCB-201ENST00000303531 TRIM5Q9C035 493 aa16.71■□□□□ 0.27
PRKCB-201ENST00000303531 SLC4A2P04920 1241 aa16.71■□□□□ 0.27
PRKCB-201ENST00000303531 BRPF3Q9ULD4 1205 aa16.71■□□□□ 0.27
PRKCB-201ENST00000303531 GRIN2BQ13224 1484 aa16.71■□□□□ 0.27
PRKCB-201ENST00000303531 SMG6Q86US8 1419 aaKnown RBP16.7■□□□□ 0.26
PRKCB-201ENST00000303531 HIP1O00291 1037 aa16.7■□□□□ 0.26
PRKCB-201ENST00000303531 XBP1P17861 261 aa16.7■□□□□ 0.26
PRKCB-201ENST00000303531 FIBPO43427 364 aa16.7■□□□□ 0.26
PRKCB-201ENST00000303531 PDCP20941 246 aa16.7■□□□□ 0.26
PRKCB-201ENST00000303531 PATL2C9JE40 543 aaKnown RBP16.69■□□□□ 0.26
PRKCB-201ENST00000303531 KINO60870 393 aaKnown RBP16.69■□□□□ 0.26
PRKCB-201ENST00000303531 PLEKHO1Q53GL0 409 aaPredicted RBP16.69■□□□□ 0.26
PRKCB-201ENST00000303531 CCDC184Q52MB2 194 aa16.69■□□□□ 0.26
PRKCB-201ENST00000303531 WDR63Q8IWG1 891 aa16.69■□□□□ 0.26
PRKCB-201ENST00000303531 CCDC43Q96MW1 224 aaKnown RBP16.69■□□□□ 0.26
PRKCB-201ENST00000303531 ERBINQ96RT1 1412 aa16.69■□□□□ 0.26
PRKCB-201ENST00000303531 NCAPD3P42695 1498 aa16.69■□□□□ 0.26
PRKCB-201ENST00000303531 GPRASP1Q5JY77 1395 aa16.69■□□□□ 0.26
PRKCB-201ENST00000303531 SULT6B1Q6IMI4 303 aa16.68■□□□□ 0.26
PRKCB-201ENST00000303531 ERC1Q8IUD2 1116 aa16.68■□□□□ 0.26
PRKCB-201ENST00000303531 RUFY1Q96T51 708 aa16.68■□□□□ 0.26
PRKCB-201ENST00000303531 TBC1D2BQ9UPU7 963 aa16.68■□□□□ 0.26
PRKCB-201ENST00000303531 EFCAB5A4FU69 1503 aa16.68■□□□□ 0.26
PRKCB-201ENST00000303531 MVPQ14764 893 aaKnown RBP16.68■□□□□ 0.26
PRKCB-201ENST00000303531 ATF7IPQ6VMQ6 1270 aa16.68■□□□□ 0.26
PRKCB-201ENST00000303531 MTMR7Q9Y216 660 aa16.68■□□□□ 0.26
PRKCB-201ENST00000303531 SART3Q15020 963 aaKnown RBP16.67■□□□□ 0.26
PRKCB-201ENST00000303531 CDK19Q9BWU1 502 aa16.67■□□□□ 0.26
PRKCB-201ENST00000303531 HDGFL1Q5TGJ6 251 aa16.67■□□□□ 0.26
PRKCB-201ENST00000303531 CABP1Q9NZU7 370 aa16.67■□□□□ 0.26
PRKCB-201ENST00000303531 TXNDC2Q86VQ3 553 aa16.67■□□□□ 0.26
PRKCB-201ENST00000303531 SAMD1Q6SPF0 538 aaPredicted RBP16.67■□□□□ 0.26
PRKCB-201ENST00000303531 SMC2O95347 1197 aa16.66■□□□□ 0.26
PRKCB-201ENST00000303531 CT47B1P0C2W7 299 aaPredicted RBP16.66■□□□□ 0.26
PRKCB-201ENST00000303531 CCT4P50991 539 aaKnown RBP16.66■□□□□ 0.26
PRKCB-201ENST00000303531 LRRCC1Q9C099 1032 aa16.66■□□□□ 0.26
PRKCB-201ENST00000303531 ATP2B1P20020 1258 aa16.66■□□□□ 0.26
PRKCB-201ENST00000303531 CCDC173Q0VFZ6 552 aa16.66■□□□□ 0.26
PRKCB-201ENST00000303531 ESCO1Q5FWF5 840 aa16.66■□□□□ 0.26
PRKCB-201ENST00000303531 ACBD3Q9H3P7 528 aa16.66■□□□□ 0.26
PRKCB-201ENST00000303531 WDR97A6NE52 1622 aa16.66■□□□□ 0.26
PRKCB-201ENST00000303531 K7ELQ4 463 aaPredicted RBP16.65■□□□□ 0.26
PRKCB-201ENST00000303531 CEBPZQ03701 1054 aaKnown RBP16.65■□□□□ 0.26
PRKCB-201ENST00000303531 AK7Q96M32 723 aa16.65■□□□□ 0.26
PRKCB-201ENST00000303531 FMNL2Q96PY5 1086 aa16.65■□□□□ 0.26
PRKCB-201ENST00000303531 CWC22Q9HCG8 908 aaKnown RBP16.65■□□□□ 0.26
PRKCB-201ENST00000303531 PRG4Q92954 1404 aaPredicted RBP16.65■□□□□ 0.26
PRKCB-201ENST00000303531 HSP90B2PQ58FF3 399 aa16.65■□□□□ 0.26
PRKCB-201ENST00000303531 FAM177BA6PVY3 158 aa16.64■□□□□ 0.26
PRKCB-201ENST00000303531 CHD1LQ86WJ1 897 aa16.64■□□□□ 0.25
PRKCB-201ENST00000303531 TIAM1Q13009 1591 aa16.64■□□□□ 0.25
PRKCB-201ENST00000303531 CYP46A1Q9Y6A2 500 aa16.64■□□□□ 0.25
PRKCB-201ENST00000303531 TTLL5Q6EMB2 1281 aa16.64■□□□□ 0.25
PRKCB-201ENST00000303531 ZNF396Q96N95 335 aaPredicted RBP16.64■□□□□ 0.25
PRKCB-201ENST00000303531 EPS15P42566 896 aa16.63■□□□□ 0.25
PRKCB-201ENST00000303531 MAP4K4O95819 1239 aaPredicted RBP16.63■□□□□ 0.25
PRKCB-201ENST00000303531 KIF6Q6ZMV9 814 aa16.63■□□□□ 0.25
PRKCB-201ENST00000303531 STK38Q15208 465 aa16.63■□□□□ 0.25
PRKCB-201ENST00000303531 OFD1O75665 1012 aa16.62■□□□□ 0.25
PRKCB-201ENST00000303531 MEX3CQ5U5Q3 659 aaKnown RBP16.62■□□□□ 0.25
PRKCB-201ENST00000303531 RRP12Q5JTH9 1297 aaKnown RBP16.62■□□□□ 0.25
PRKCB-201ENST00000303531 STK3Q13188 491 aa16.62■□□□□ 0.25
PRKCB-201ENST00000303531 SPC24Q8NBT2 197 aa16.62■□□□□ 0.25
PRKCB-201ENST00000303531 SRCIN1Q9C0H9 1055 aa16.62■□□□□ 0.25
PRKCB-201ENST00000303531 SIL1Q9H173 461 aa16.62■□□□□ 0.25
PRKCB-201ENST00000303531 DAPK1P53355 1430 aa16.62■□□□□ 0.25
PRKCB-201ENST00000303531 CAGE1Q8TC20 777 aa16.62■□□□□ 0.25
PRKCB-201ENST00000303531 CT47A1Q5JQC4 288 aaPredicted RBP16.62■□□□□ 0.25
PRKCB-201ENST00000303531 TTC39AQ5SRH9 613 aa16.61■□□□□ 0.25
PRKCB-201ENST00000303531 MTERF4Q7Z6M4 381 aaKnown RBP16.61■□□□□ 0.25
PRKCB-201ENST00000303531 ZNF428Q96B54 188 aa16.61■□□□□ 0.25
PRKCB-201ENST00000303531 RBM42Q9BTD8 480 aaKnown RBP16.61■□□□□ 0.25
PRKCB-201ENST00000303531 PRXQ9BXM0 1461 aa16.61■□□□□ 0.25
PRKCB-201ENST00000303531 CCDC158Q5M9N0 1113 aa16.61■□□□□ 0.25
PRKCB-201ENST00000303531 ZNF692Q9BU19 519 aaPredicted RBP16.61■□□□□ 0.25
PRKCB-201ENST00000303531 HECW1Q76N89 1606 aa16.61■□□□□ 0.25
PRKCB-201ENST00000303531 TROQ12816 1431 aaPredicted RBP16.6■□□□□ 0.25
PRKCB-201ENST00000303531 CDR1P51861 262 aa16.6■□□□□ 0.25
PRKCB-201ENST00000303531 PLEKHH2Q8IVE3 1493 aa16.6■□□□□ 0.25
PRKCB-201ENST00000303531 WDR33Q9C0J8 1336 aaKnown RBP16.6■□□□□ 0.25
PRKCB-201ENST00000303531 AEBP1Q8IUX7 1158 aa16.6■□□□□ 0.25
PRKCB-201ENST00000303531 MAP7D2Q96T17 732 aa16.6■□□□□ 0.25
PRKCB-201ENST00000303531 IL27Q8NEV9 243 aa16.6■□□□□ 0.25
PRKCB-201ENST00000303531 CNNM1Q9NRU3 951 aa16.59■□□□□ 0.25
PRKCB-201ENST00000303531 ANKRD1Q15327 319 aa16.59■□□□□ 0.25
PRKCB-201ENST00000303531 CCDC192P0DO97 292 aa16.59■□□□□ 0.25
PRKCB-201ENST00000303531 TATP17735 454 aaPredicted RBP16.59■□□□□ 0.25
PRKCB-201ENST00000303531 GRPEL1Q9HAV7 217 aa16.58■□□□□ 0.25
PRKCB-201ENST00000303531 SUPT6HQ7KZ85 1726 aaKnown RBP16.58■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms