RNA–Protein interactions for RNA: ENST00000303460.4

HOXC10-201, Transcript of homeobox C10, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC10, Length 1,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC10-201ENST00000303460 NME9Q86XW9 330 aa24.91■■□□□ 1.58
HOXC10-201ENST00000303460 PMFBP1Q8TBY8 1022 aa24.9■■□□□ 1.58
HOXC10-201ENST00000303460 USP6P35125 1406 aa24.9■■□□□ 1.58
HOXC10-201ENST00000303460 WDR43Q15061 677 aaKnown RBP eCLIP24.89■■□□□ 1.58
HOXC10-201ENST00000303460 ZRANB1Q9UGI0 708 aa24.88■■□□□ 1.57
HOXC10-201ENST00000303460 SHPRHQ149N8 1683 aa24.88■■□□□ 1.57
HOXC10-201ENST00000303460 ERICH6BQ5W0A0 696 aa24.88■■□□□ 1.57
HOXC10-201ENST00000303460 PROSER2Q86WR7 435 aaPredicted RBP24.87■■□□□ 1.57
HOXC10-201ENST00000303460 SSH2Q76I76 1423 aa24.86■■□□□ 1.57
HOXC10-201ENST00000303460 TTC21BQ7Z4L5 1316 aa24.86■■□□□ 1.57
HOXC10-201ENST00000303460 C14orf37Q86TY3 774 aa24.84■■□□□ 1.57
HOXC10-201ENST00000303460 NGDNQ8NEJ9 315 aaKnown RBP24.83■■□□□ 1.57
HOXC10-201ENST00000303460 FBLN1P23142 703 aa24.81■■□□□ 1.56
HOXC10-201ENST00000303460 CFAP53Q96M91 514 aa24.8■■□□□ 1.56
HOXC10-201ENST00000303460 COL3A1P02461 1466 aaPredicted RBP24.8■■□□□ 1.56
HOXC10-201ENST00000303460 COG3Q96JB2 828 aa24.79■■□□□ 1.56
HOXC10-201ENST00000303460 TMEM94Q12767 1356 aa24.78■■□□□ 1.56
HOXC10-201ENST00000303460 MAP2P11137 1827 aaKnown RBP24.78■■□□□ 1.56
HOXC10-201ENST00000303460 OVOS2A0A0J9YW53 1432 aa24.77■■□□□ 1.56
HOXC10-201ENST00000303460 OVOS2Q6IE36 1432 aa24.77■■□□□ 1.56
HOXC10-201ENST00000303460 PHF8Q9UPP1 1060 aa24.77■■□□□ 1.56
HOXC10-201ENST00000303460 POLKQ9UBT6 870 aa24.76■■□□□ 1.55
HOXC10-201ENST00000303460 SALL2Q9Y467 1007 aaPredicted RBP24.76■■□□□ 1.55
HOXC10-201ENST00000303460 TTC21AQ8NDW8 1320 aa24.76■■□□□ 1.55
HOXC10-201ENST00000303460 CCDC146Q8IYE0 955 aa24.75■■□□□ 1.55
HOXC10-201ENST00000303460 C19orf44Q9H6X5 657 aa24.75■■□□□ 1.55
HOXC10-201ENST00000303460 AATKQ6ZMQ8 1374 aa24.75■■□□□ 1.55
HOXC10-201ENST00000303460 PNPLA6Q8IY17 1366 aa24.75■■□□□ 1.55
HOXC10-201ENST00000303460 PIK3C2AO00443 1686 aa24.74■■□□□ 1.55
HOXC10-201ENST00000303460 ESCO1Q5FWF5 840 aa24.74■■□□□ 1.55
HOXC10-201ENST00000303460 SMG6Q86US8 1419 aaKnown RBP24.72■■□□□ 1.55
HOXC10-201ENST00000303460 NCOA3Q9Y6Q9 1424 aa24.72■■□□□ 1.55
HOXC10-201ENST00000303460 EMILIN1Q9Y6C2 1016 aa24.72■■□□□ 1.55
HOXC10-201ENST00000303460 ORAI2Q96SN7 254 aa24.71■■□□□ 1.55
HOXC10-201ENST00000303460 XIRP1Q702N8 1843 aaKnown RBP24.71■■□□□ 1.55
HOXC10-201ENST00000303460 C1orf167Q5SNV9 1468 aa24.69■■□□□ 1.54
HOXC10-201ENST00000303460 PPM1GO15355 546 aaPredicted RBP24.69■■□□□ 1.54
HOXC10-201ENST00000303460 USP31Q70CQ4 1352 aa24.69■■□□□ 1.54
HOXC10-201ENST00000303460 RRS1Q15050 365 aaKnown RBP24.69■■□□□ 1.54
HOXC10-201ENST00000303460 ZNF335Q9H4Z2 1342 aaPredicted RBP24.68■■□□□ 1.54
HOXC10-201ENST00000303460 MARF1Q9Y4F3 1742 aaKnown RBP24.68■■□□□ 1.54
HOXC10-201ENST00000303460 DCCP43146 1447 aa24.68■■□□□ 1.54
HOXC10-201ENST00000303460 CDK12Q9NYV4 1490 aaPredicted RBP24.67■■□□□ 1.54
HOXC10-201ENST00000303460 MST1RQ04912 1400 aa24.66■■□□□ 1.54
HOXC10-201ENST00000303460 APAF1O14727 1248 aa24.66■■□□□ 1.54
HOXC10-201ENST00000303460 DIAPH1O60610 1272 aaKnown RBP24.66■■□□□ 1.54
HOXC10-201ENST00000303460 U2AF1L5P0DN76 240 aaPredicted RBP24.66■■□□□ 1.54
HOXC10-201ENST00000303460 U2AF1Q01081 240 aaKnown RBP eCLIP24.66■■□□□ 1.54
HOXC10-201ENST00000303460 LRRC7Q96NW7 1537 aa24.65■■□□□ 1.54
HOXC10-201ENST00000303460 NUDCQ9Y266 331 aa24.65■■□□□ 1.54
HOXC10-201ENST00000303460 USP54Q70EL1 1684 aa24.65■■□□□ 1.54
HOXC10-201ENST00000303460 ATF3P18847 181 aa24.65■■□□□ 1.54
HOXC10-201ENST00000303460 U2SURPO15042 1029 aaKnown RBP24.64■■□□□ 1.53
HOXC10-201ENST00000303460 PAK3O75914 559 aaPredicted RBP24.63■■□□□ 1.53
HOXC10-201ENST00000303460 PSME1Q06323 249 aa24.63■■□□□ 1.53
HOXC10-201ENST00000303460 KIF1AQ12756 1690 aa24.63■■□□□ 1.53
HOXC10-201ENST00000303460 NLRP6P59044 892 aa24.63■■□□□ 1.53
HOXC10-201ENST00000303460 RUNDC1Q96C34 613 aa24.63■■□□□ 1.53
HOXC10-201ENST00000303460 FOXO3O43524 673 aa24.62■■□□□ 1.53
HOXC10-201ENST00000303460 NUTM2GQ5VZR2 741 aa24.62■■□□□ 1.53
HOXC10-201ENST00000303460 IQSEC2Q5JU85 1478 aa24.62■■□□□ 1.53
HOXC10-201ENST00000303460 PEAK1Q9H792 1746 aa24.61■■□□□ 1.53
HOXC10-201ENST00000303460 ZNF521Q96K83 1311 aa24.61■■□□□ 1.53
HOXC10-201ENST00000303460 PDE3BQ13370 1112 aa24.61■■□□□ 1.53
HOXC10-201ENST00000303460 ABTB2Q8N961 1025 aa24.61■■□□□ 1.53
HOXC10-201ENST00000303460 CDCA7LQ96GN5 454 aa24.61■■□□□ 1.53
HOXC10-201ENST00000303460 MSH6P52701 1360 aa24.61■■□□□ 1.53
HOXC10-201ENST00000303460 SOX12O15370 315 aa24.61■■□□□ 1.53
HOXC10-201ENST00000303460 PPP4R2Q9NY27 417 aa24.61■■□□□ 1.53
HOXC10-201ENST00000303460 CADPS2Q86UW7 1296 aa24.59■■□□□ 1.53
HOXC10-201ENST00000303460 IL13P35225 146 aa24.59■■□□□ 1.53
HOXC10-201ENST00000303460 XPCQ01831 940 aaPredicted RBP24.59■■□□□ 1.53
HOXC10-201ENST00000303460 TSHZ2Q9NRE2 1034 aa24.59■■□□□ 1.53
HOXC10-201ENST00000303460 TRPM3Q9HCF6 1732 aaPredicted RBP24.57■■□□□ 1.52
HOXC10-201ENST00000303460 TCP11L2Q8N4U5 519 aa24.57■■□□□ 1.52
HOXC10-201ENST00000303460 PLEKHF1Q96S99 279 aa24.57■■□□□ 1.52
HOXC10-201ENST00000303460 MAP3K19Q56UN5 1328 aa24.56■■□□□ 1.52
HOXC10-201ENST00000303460 DMRT2Q9Y5R5 561 aa24.56■■□□□ 1.52
HOXC10-201ENST00000303460 RRP7AQ9Y3A4 280 aaKnown RBP24.54■■□□□ 1.52
HOXC10-201ENST00000303460 NGEFQ8N5V2 710 aa24.53■■□□□ 1.52
HOXC10-201ENST00000303460 KRT28Q7Z3Y7 464 aa24.53■■□□□ 1.52
HOXC10-201ENST00000303460 HSP90AB2PQ58FF8 381 aa24.52■■□□□ 1.52
HOXC10-201ENST00000303460 IRX6P78412 446 aaPredicted RBP24.51■■□□□ 1.51
HOXC10-201ENST00000303460 SBNO1A3KN83 1393 aa24.51■■□□□ 1.51
HOXC10-201ENST00000303460 EIF4A2Q14240 407 aaKnown RBP24.51■■□□□ 1.51
HOXC10-201ENST00000303460 RSPH6AQ9H0K4 717 aa24.51■■□□□ 1.51
HOXC10-201ENST00000303460 RNF123Q5XPI4 1314 aa24.51■■□□□ 1.51
HOXC10-201ENST00000303460 FCHSD2O94868 740 aa24.5■■□□□ 1.51
HOXC10-201ENST00000303460 GOLGA2Q08379 1002 aa24.5■■□□□ 1.51
HOXC10-201ENST00000303460 NEUROD2Q15784 382 aa24.5■■□□□ 1.51
HOXC10-201ENST00000303460 DDX17Q92841 729 aaKnown RBP24.5■■□□□ 1.51
HOXC10-201ENST00000303460 WWC1Q8IX03 1113 aa24.49■■□□□ 1.51
HOXC10-201ENST00000303460 NFAT5O94916 1531 aa24.49■■□□□ 1.51
HOXC10-201ENST00000303460 HMOX1P09601 288 aa24.49■■□□□ 1.51
HOXC10-201ENST00000303460 PHF23Q9BUL5 403 aaPredicted RBP24.49■■□□□ 1.51
HOXC10-201ENST00000303460 FLT4P35916 1363 aa24.48■■□□□ 1.51
HOXC10-201ENST00000303460 SPINK5Q9NQ38 1064 aaPredicted RBP24.47■■□□□ 1.51
HOXC10-201ENST00000303460 ALS2Q96Q42 1657 aa24.47■■□□□ 1.51
HOXC10-201ENST00000303460 PRKAR2BP31323 418 aa24.47■■□□□ 1.51
HOXC10-201ENST00000303460 RGPD1P0DJD0 1748 aa24.46■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms