RNA–Protein interactions for RNA: ENST00000301323.7

RECQL4-201, Transcript of RecQ like helicase 4, humanhuman

TSL 3

Gene RECQL4, Length 781 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RECQL4-201ENST00000301323 PHRF1Q9P1Y6 1649 aaKnown RBP23.54■■□□□ 1.36
RECQL4-201ENST00000301323 PPIP5K1Q6PFW1 1433 aa23.53■■□□□ 1.36
RECQL4-201ENST00000301323 PLEKHG3A1L390 1219 aa23.53■■□□□ 1.36
RECQL4-201ENST00000301323 NRAPQ86VF7 1730 aa23.52■■□□□ 1.36
RECQL4-201ENST00000301323 ACEP12821 1306 aa23.52■■□□□ 1.36
RECQL4-201ENST00000301323 GLI3P10071 1580 aa23.52■■□□□ 1.36
RECQL4-201ENST00000301323 SRPK2P78362 688 aaKnown RBP23.51■■□□□ 1.35
RECQL4-201ENST00000301323 PLEKHG5O94827 1062 aa23.5■■□□□ 1.35
RECQL4-201ENST00000301323 HAP1P54257 671 aaPredicted RBP23.5■■□□□ 1.35
RECQL4-201ENST00000301323 CABP2Q9NPB3 220 aa23.5■■□□□ 1.35
RECQL4-201ENST00000301323 SBNO2Q9Y2G9 1366 aa23.5■■□□□ 1.35
RECQL4-201ENST00000301323 COL14A1Q05707 1796 aaKnown RBP23.5■■□□□ 1.35
RECQL4-201ENST00000301323 UNC5CLQ8IV45 518 aa23.48■■□□□ 1.35
RECQL4-201ENST00000301323 PAK3O75914 559 aaPredicted RBP23.47■■□□□ 1.35
RECQL4-201ENST00000301323 NRKQ7Z2Y5 1582 aa23.47■■□□□ 1.35
RECQL4-201ENST00000301323 EVC2Q86UK5 1308 aa23.46■■□□□ 1.35
RECQL4-201ENST00000301323 EP400Q96L91 3159 aa23.46■■□□□ 1.35
RECQL4-201ENST00000301323 GJD4Q96KN9 370 aaPredicted RBP23.44■■□□□ 1.34
RECQL4-201ENST00000301323 USP6P35125 1406 aa23.43■■□□□ 1.34
RECQL4-201ENST00000301323 FAM83GA6ND36 823 aa23.43■■□□□ 1.34
RECQL4-201ENST00000301323 CARD11Q9BXL7 1154 aa23.43■■□□□ 1.34
RECQL4-201ENST00000301323 AKAP12Q02952 1782 aa23.42■■□□□ 1.34
RECQL4-201ENST00000301323 BRD4O60885 1362 aaPredicted RBP23.41■■□□□ 1.34
RECQL4-201ENST00000301323 USP19O94966 1318 aa23.4■■□□□ 1.34
RECQL4-201ENST00000301323 VPS72Q15906 364 aa23.4■■□□□ 1.34
RECQL4-201ENST00000301323 CABP1Q9NZU7 370 aa23.4■■□□□ 1.34
RECQL4-201ENST00000301323 PIK3C2AO00443 1686 aa23.4■■□□□ 1.34
RECQL4-201ENST00000301323 SSH2Q76I76 1423 aa23.4■■□□□ 1.34
RECQL4-201ENST00000301323 ATAD2Q6PL18 1390 aa23.39■■□□□ 1.33
RECQL4-201ENST00000301323 KIAA0232Q92628 1395 aa23.38■■□□□ 1.33
RECQL4-201ENST00000301323 MON2Q7Z3U7 1717 aa23.36■■□□□ 1.33
RECQL4-201ENST00000301323 LMO7Q8WWI1 1683 aa23.36■■□□□ 1.33
RECQL4-201ENST00000301323 NUTM2GQ5VZR2 741 aa23.36■■□□□ 1.33
RECQL4-201ENST00000301323 BRWD3Q6RI45 1802 aa23.36■■□□□ 1.33
RECQL4-201ENST00000301323 SLIT3O75094 1523 aa23.35■■□□□ 1.33
RECQL4-201ENST00000301323 PRDM11Q9NQV5 511 aa23.35■■□□□ 1.33
RECQL4-201ENST00000301323 BTG4Q9NY30 223 aa23.35■■□□□ 1.33
RECQL4-201ENST00000301323 CPSF1Q10570 1443 aaKnown RBP23.34■■□□□ 1.33
RECQL4-201ENST00000301323 ABTB2Q8N961 1025 aa23.34■■□□□ 1.33
RECQL4-201ENST00000301323 CPDO75976 1380 aa23.33■■□□□ 1.33
RECQL4-201ENST00000301323 CLSPNQ9HAW4 1339 aa23.32■■□□□ 1.32
RECQL4-201ENST00000301323 CD163L1Q9NR16 1453 aa23.31■■□□□ 1.32
RECQL4-201ENST00000301323 THSD7AQ9UPZ6 1657 aa23.3■■□□□ 1.32
RECQL4-201ENST00000301323 CHRNA2Q15822 529 aa23.29■■□□□ 1.32
RECQL4-201ENST00000301323 NLRP13Q86W25 1043 aa23.29■■□□□ 1.32
RECQL4-201ENST00000301323 PCGF6Q9BYE7 350 aa23.29■■□□□ 1.32
RECQL4-201ENST00000301323 CAMTA1Q9Y6Y1 1673 aa23.28■■□□□ 1.32
RECQL4-201ENST00000301323 ONECUT3O60422 494 aaPredicted RBP23.28■■□□□ 1.32
RECQL4-201ENST00000301323 ZC3H6P61129 1189 aaKnown RBP23.28■■□□□ 1.32
RECQL4-201ENST00000301323 TESK2Q96S53 571 aa23.28■■□□□ 1.32
RECQL4-201ENST00000301323 CCDC9Q9Y3X0 531 aaKnown RBP23.28■■□□□ 1.32
RECQL4-201ENST00000301323 USP54Q70EL1 1684 aa23.28■■□□□ 1.32
RECQL4-201ENST00000301323 SPATA31A5Q5VU36 1347 aa23.27■■□□□ 1.32
RECQL4-201ENST00000301323 SPATA31A7Q8IWB4 1347 aa23.27■■□□□ 1.32
RECQL4-201ENST00000301323 SEPT12Q8IYM1 358 aa23.26■■□□□ 1.31
RECQL4-201ENST00000301323 TTC21BQ7Z4L5 1316 aa23.26■■□□□ 1.31
RECQL4-201ENST00000301323 GCP02774 474 aa23.25■■□□□ 1.31
RECQL4-201ENST00000301323 ZNF692Q9BU19 519 aaPredicted RBP23.25■■□□□ 1.31
RECQL4-201ENST00000301323 KTN1Q86UP2 1357 aaKnown RBP23.25■■□□□ 1.31
RECQL4-201ENST00000301323 TTC21AQ8NDW8 1320 aa23.24■■□□□ 1.31
RECQL4-201ENST00000301323 USP47Q96K76 1375 aa23.24■■□□□ 1.31
RECQL4-201ENST00000301323 ST20-MTHFSA0A0A6YYL1 179 aa23.23■■□□□ 1.31
RECQL4-201ENST00000301323 NLRP6P59044 892 aa23.23■■□□□ 1.31
RECQL4-201ENST00000301323 NFAT5O94916 1531 aa23.23■■□□□ 1.31
RECQL4-201ENST00000301323 COL18A1P39060 1754 aa23.22■■□□□ 1.31
RECQL4-201ENST00000301323 FAM98CQ17RN3 349 aaKnown RBP23.22■■□□□ 1.31
RECQL4-201ENST00000301323 PUS7Q96PZ0 661 aaKnown RBP23.22■■□□□ 1.31
RECQL4-201ENST00000301323 TIMELESSQ9UNS1 1208 aa23.22■■□□□ 1.31
RECQL4-201ENST00000301323 COL5A2P05997 1499 aaPredicted RBP23.22■■□□□ 1.31
RECQL4-201ENST00000301323 SPATA31A1Q5TZJ5 1347 aa23.21■■□□□ 1.31
RECQL4-201ENST00000301323 A0A1W2PP64 1363 aa23.19■■□□□ 1.3
RECQL4-201ENST00000301323 NINLQ9Y2I6 1382 aa23.19■■□□□ 1.3
RECQL4-201ENST00000301323 STRN4Q9NRL3 753 aa23.19■■□□□ 1.3
RECQL4-201ENST00000301323 EDC4Q6P2E9 1401 aaKnown RBP23.18■■□□□ 1.3
RECQL4-201ENST00000301323 AATKQ6ZMQ8 1374 aa23.18■■□□□ 1.3
RECQL4-201ENST00000301323 BLMP54132 1417 aaPredicted RBP23.17■■□□□ 1.3
RECQL4-201ENST00000301323 USP31Q70CQ4 1352 aa23.17■■□□□ 1.3
RECQL4-201ENST00000301323 KRT27Q7Z3Y8 459 aa23.17■■□□□ 1.3
RECQL4-201ENST00000301323 SLC12A5Q9H2X9 1139 aa23.17■■□□□ 1.3
RECQL4-201ENST00000301323 TMC1Q8TDI8 760 aa23.16■■□□□ 1.3
RECQL4-201ENST00000301323 ABCC6O95255 1503 aa23.16■■□□□ 1.3
RECQL4-201ENST00000301323 A0A0G2JS52 829 aa23.15■■□□□ 1.3
RECQL4-201ENST00000301323 MYT1Q01538 1121 aa23.15■■□□□ 1.3
RECQL4-201ENST00000301323 LARP1Q6PKG0 1096 aaKnown RBP23.14■■□□□ 1.29
RECQL4-201ENST00000301323 HDGFL2Q7Z4V5 671 aaPredicted RBP23.13■■□□□ 1.29
RECQL4-201ENST00000301323 CCDC125Q86Z20 511 aa23.13■■□□□ 1.29
RECQL4-201ENST00000301323 OVOS2A0A0J9YW53 1432 aa23.13■■□□□ 1.29
RECQL4-201ENST00000301323 OVOS2Q6IE36 1432 aa23.13■■□□□ 1.29
RECQL4-201ENST00000301323 SLC24A1O60721 1099 aa23.12■■□□□ 1.29
RECQL4-201ENST00000301323 CRB1P82279 1406 aa23.12■■□□□ 1.29
RECQL4-201ENST00000301323 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.12■■□□□ 1.29
RECQL4-201ENST00000301323 KCNH5Q8NCM2 988 aa23.12■■□□□ 1.29
RECQL4-201ENST00000301323 TERF2IPQ9NYB0 399 aa23.12■■□□□ 1.29
RECQL4-201ENST00000301323 WNK3Q9BYP7 1800 aa23.12■■□□□ 1.29
RECQL4-201ENST00000301323 PARP4Q9UKK3 1724 aaKnown RBP23.11■■□□□ 1.29
RECQL4-201ENST00000301323 EVA1CP58658 441 aa23.11■■□□□ 1.29
RECQL4-201ENST00000301323 ARHGEF25Q86VW2 580 aa23.11■■□□□ 1.29
RECQL4-201ENST00000301323 NME9Q86XW9 330 aa23.11■■□□□ 1.29
RECQL4-201ENST00000301323 ZRANB1Q9UGI0 708 aa23.11■■□□□ 1.29
RECQL4-201ENST00000301323 RGPD5Q99666 1765 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 165.3 ms