RNA–Protein interactions for RNA: ENST00000301280.9

CHAF1A-201, Transcript of chromatin assembly factor 1 subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHAF1A, Length 3,339 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-201ENST00000301280 NSD2O96028 1365 aa20.03■□□□□ 0.8
CHAF1A-201ENST00000301280 C14orf37Q86TY3 774 aa20.03■□□□□ 0.8
CHAF1A-201ENST00000301280 PHF23Q9BUL5 403 aaPredicted RBP20.03■□□□□ 0.8
CHAF1A-201ENST00000301280 RIPK4P57078 832 aa20.03■□□□□ 0.8
CHAF1A-201ENST00000301280 IL27Q8NEV9 243 aa20.03■□□□□ 0.8
CHAF1A-201ENST00000301280 CDK19Q9BWU1 502 aa20.03■□□□□ 0.8
CHAF1A-201ENST00000301280 DIP2BQ9P265 1576 aa20.03■□□□□ 0.8
CHAF1A-201ENST00000301280 RRS1Q15050 365 aaKnown RBP20.01■□□□□ 0.79
CHAF1A-201ENST00000301280 CENPQQ7L2Z9 268 aaPredicted RBP20.01■□□□□ 0.79
CHAF1A-201ENST00000301280 RBM33Q96EV2 1170 aaKnown RBP20.01■□□□□ 0.79
CHAF1A-201ENST00000301280 NINLQ9Y2I6 1382 aa20■□□□□ 0.79
CHAF1A-201ENST00000301280 CEBPAP49715 358 aaPredicted RBP19.99■□□□□ 0.79
CHAF1A-201ENST00000301280 RIMBP3CA6NJZ7 1639 aa19.99■□□□□ 0.79
CHAF1A-201ENST00000301280 RIMBP3BA6NNM3 1639 aa19.99■□□□□ 0.79
CHAF1A-201ENST00000301280 RIMBP3Q9UFD9 1639 aa19.99■□□□□ 0.79
CHAF1A-201ENST00000301280 COL3A1P02461 1466 aaPredicted RBP19.99■□□□□ 0.79
CHAF1A-201ENST00000301280 HDGFL2Q7Z4V5 671 aaPredicted RBP19.99■□□□□ 0.79
CHAF1A-201ENST00000301280 ANKRD36BQ8N2N9 1353 aa19.98■□□□□ 0.79
CHAF1A-201ENST00000301280 NUTM2GQ5VZR2 741 aa19.98■□□□□ 0.79
CHAF1A-201ENST00000301280 C1orf115Q9H7X2 142 aa19.98■□□□□ 0.79
CHAF1A-201ENST00000301280 CDC42BPGQ6DT37 1551 aa19.98■□□□□ 0.79
CHAF1A-201ENST00000301280 DCTN1Q14203 1278 aa19.98■□□□□ 0.79
CHAF1A-201ENST00000301280 NLRP1Q9C000 1473 aa19.98■□□□□ 0.79
CHAF1A-201ENST00000301280 DLC1Q96QB1 1528 aa19.98■□□□□ 0.79
CHAF1A-201ENST00000301280 TERF2IPQ9NYB0 399 aa19.97■□□□□ 0.79
CHAF1A-201ENST00000301280 SPATA31D1Q6ZQQ2 1576 aa19.97■□□□□ 0.79
CHAF1A-201ENST00000301280 CD163L1Q9NR16 1453 aa19.96■□□□□ 0.79
CHAF1A-201ENST00000301280 SLC26A8Q96RN1 970 aa19.96■□□□□ 0.79
CHAF1A-201ENST00000301280 EMILIN1Q9Y6C2 1016 aa19.96■□□□□ 0.79
CHAF1A-201ENST00000301280 YEATS2Q9ULM3 1422 aa19.96■□□□□ 0.79
CHAF1A-201ENST00000301280 SEC24BO95487 1268 aa19.96■□□□□ 0.79
CHAF1A-201ENST00000301280 KNDC1Q76NI1 1749 aa19.95■□□□□ 0.78
CHAF1A-201ENST00000301280 PRKAR2BP31323 418 aa19.95■□□□□ 0.78
CHAF1A-201ENST00000301280 ANO8Q9HCE9 1232 aaPredicted RBP19.95■□□□□ 0.78
CHAF1A-201ENST00000301280 ALKQ9UM73 1620 aa19.94■□□□□ 0.78
CHAF1A-201ENST00000301280 RARSP54136 660 aaKnown RBP19.94■□□□□ 0.78
CHAF1A-201ENST00000301280 FAM161AQ3B820 660 aa19.94■□□□□ 0.78
CHAF1A-201ENST00000301280 PCDHB15Q9Y5E8 787 aa19.94■□□□□ 0.78
CHAF1A-201ENST00000301280 NME9Q86XW9 330 aa19.94■□□□□ 0.78
CHAF1A-201ENST00000301280 FYB1O15117 783 aa19.93■□□□□ 0.78
CHAF1A-201ENST00000301280 DIAPH1O60610 1272 aaKnown RBP19.93■□□□□ 0.78
CHAF1A-201ENST00000301280 NRXN3Q9Y4C0 1643 aa19.92■□□□□ 0.78
CHAF1A-201ENST00000301280 ABCC11Q96J66 1382 aa19.92■□□□□ 0.78
CHAF1A-201ENST00000301280 MFAP1P55081 439 aaKnown RBP19.92■□□□□ 0.78
CHAF1A-201ENST00000301280 CCDC27Q2M243 656 aa19.91■□□□□ 0.78
CHAF1A-201ENST00000301280 PMFBP1Q8TBY8 1022 aa19.91■□□□□ 0.78
CHAF1A-201ENST00000301280 LTV1Q96GA3 475 aaPredicted RBP19.91■□□□□ 0.78
CHAF1A-201ENST00000301280 MYH16Q9H6N6 1097 aa19.91■□□□□ 0.78
CHAF1A-201ENST00000301280 FAM83GA6ND36 823 aa19.9■□□□□ 0.78
CHAF1A-201ENST00000301280 SLC52A1Q9NWF4 448 aa19.9■□□□□ 0.78
CHAF1A-201ENST00000301280 NECTIN2Q92692 538 aa19.89■□□□□ 0.78
CHAF1A-201ENST00000301280 ARHGEF40Q8TER5 1519 aa19.89■□□□□ 0.78
CHAF1A-201ENST00000301280 ZNF428Q96B54 188 aa19.89■□□□□ 0.77
CHAF1A-201ENST00000301280 NOB1Q9ULX3 412 aaKnown RBP19.89■□□□□ 0.77
CHAF1A-201ENST00000301280 SSH1Q8WYL5 1049 aa19.89■□□□□ 0.77
CHAF1A-201ENST00000301280 PDZRN3Q9UPQ7 1066 aa19.89■□□□□ 0.77
CHAF1A-201ENST00000301280 TMPOP42166 694 aaKnown RBP19.88■□□□□ 0.77
CHAF1A-201ENST00000301280 FOXD4L1Q9NU39 408 aa19.88■□□□□ 0.77
CHAF1A-201ENST00000301280 TRHP20396 242 aaPredicted RBP19.87■□□□□ 0.77
CHAF1A-201ENST00000301280 LNPKQ9C0E8 428 aa19.87■□□□□ 0.77
CHAF1A-201ENST00000301280 DZIP1LQ8IYY4 767 aaKnown RBP19.86■□□□□ 0.77
CHAF1A-201ENST00000301280 MIS18AQ9NYP9 233 aa19.86■□□□□ 0.77
CHAF1A-201ENST00000301280 A0A1W2PP64 1363 aa19.86■□□□□ 0.77
CHAF1A-201ENST00000301280 PHACTR3Q96KR7 559 aa19.86■□□□□ 0.77
CHAF1A-201ENST00000301280 ZKSCAN2Q63HK3 967 aa19.86■□□□□ 0.77
CHAF1A-201ENST00000301280 C8orf34Q49A92 452 aa19.85■□□□□ 0.77
CHAF1A-201ENST00000301280 LMOD2Q6P5Q4 547 aa19.85■□□□□ 0.77
CHAF1A-201ENST00000301280 KIF13AQ9H1H9 1805 aa19.84■□□□□ 0.77
CHAF1A-201ENST00000301280 DDRGK1Q96HY6 314 aa19.84■□□□□ 0.77
CHAF1A-201ENST00000301280 MON2Q7Z3U7 1717 aa19.84■□□□□ 0.77
CHAF1A-201ENST00000301280 YTHDC2Q9H6S0 1430 aaKnown RBP19.84■□□□□ 0.77
CHAF1A-201ENST00000301280 UPF2Q9HAU5 1272 aaKnown RBP19.84■□□□□ 0.77
CHAF1A-201ENST00000301280 AKAP12Q02952 1782 aa19.83■□□□□ 0.77
CHAF1A-201ENST00000301280 ZMYM3Q14202 1370 aa19.83■□□□□ 0.77
CHAF1A-201ENST00000301280 FRAT2O75474 233 aaPredicted RBP19.83■□□□□ 0.77
CHAF1A-201ENST00000301280 PDE3AQ14432 1141 aa19.83■□□□□ 0.77
CHAF1A-201ENST00000301280 KRT24Q2M2I5 525 aa19.82■□□□□ 0.76
CHAF1A-201ENST00000301280 PPP6R1Q9UPN7 881 aa19.82■□□□□ 0.76
CHAF1A-201ENST00000301280 WDR63Q8IWG1 891 aa19.82■□□□□ 0.76
CHAF1A-201ENST00000301280 GZF1Q9H116 711 aaPredicted RBP19.82■□□□□ 0.76
CHAF1A-201ENST00000301280 TMEM57Q8N5G2 664 aa19.81■□□□□ 0.76
CHAF1A-201ENST00000301280 PNPLA6Q8IY17 1366 aa19.81■□□□□ 0.76
CHAF1A-201ENST00000301280 TRIM27P14373 513 aa19.8■□□□□ 0.76
CHAF1A-201ENST00000301280 NFKBIBQ15653 356 aa19.8■□□□□ 0.76
CHAF1A-201ENST00000301280 A2ML1A8K2U0 1454 aa19.8■□□□□ 0.76
CHAF1A-201ENST00000301280 RWDD1Q9H446 243 aaPredicted RBP19.8■□□□□ 0.76
CHAF1A-201ENST00000301280 AAMPQ13685 434 aa19.79■□□□□ 0.76
CHAF1A-201ENST00000301280 TSPYL6Q8N831 410 aa19.79■□□□□ 0.76
CHAF1A-201ENST00000301280 ATAD2Q6PL18 1390 aa19.79■□□□□ 0.76
CHAF1A-201ENST00000301280 ATP7BP35670 1465 aa19.79■□□□□ 0.76
CHAF1A-201ENST00000301280 AEBP1Q8IUX7 1158 aa19.78■□□□□ 0.76
CHAF1A-201ENST00000301280 COG3Q96JB2 828 aa19.78■□□□□ 0.76
CHAF1A-201ENST00000301280 ANKRD45Q5TZF3 282 aa19.77■□□□□ 0.76
CHAF1A-201ENST00000301280 SLC4A10Q6U841 1118 aa19.77■□□□□ 0.76
CHAF1A-201ENST00000301280 MAP2P11137 1827 aaKnown RBP19.77■□□□□ 0.75
CHAF1A-201ENST00000301280 TSPOAP1O95153 1857 aa19.76■□□□□ 0.75
CHAF1A-201ENST00000301280 MCM10Q7L590 875 aa19.76■□□□□ 0.75
CHAF1A-201ENST00000301280 NUDT16Q96DE0 195 aaKnown RBP19.76■□□□□ 0.75
CHAF1A-201ENST00000301280 C3P01024 1663 aa19.75■□□□□ 0.75
CHAF1A-201ENST00000301280 USP35Q9P2H5 1018 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms