RNA–Protein interactions for RNA: ENST00000300917.9

SMG8-201, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG8, Length 3,263 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-201ENST00000300917 POLKQ9UBT6 870 aa18.94■□□□□ 0.62
SMG8-201ENST00000300917 COG6Q9Y2V7 657 aa18.94■□□□□ 0.62
SMG8-201ENST00000300917 LAS1LQ9Y4W2 734 aaKnown RBP18.94■□□□□ 0.62
SMG8-201ENST00000300917 PRR36Q9H6K5 1346 aa18.93■□□□□ 0.62
SMG8-201ENST00000300917 SHPRHQ149N8 1683 aa18.92■□□□□ 0.62
SMG8-201ENST00000300917 RIPK4P57078 832 aa18.91■□□□□ 0.62
SMG8-201ENST00000300917 TMPOP42166 694 aaKnown RBP18.91■□□□□ 0.62
SMG8-201ENST00000300917 AMOTL2Q9Y2J4 779 aa18.91■□□□□ 0.62
SMG8-201ENST00000300917 PRKAR2BP31323 418 aa18.91■□□□□ 0.62
SMG8-201ENST00000300917 THUMPD2Q9BTF0 503 aaKnown RBP18.9■□□□□ 0.62
SMG8-201ENST00000300917 BCL11AQ9H165 835 aa18.9■□□□□ 0.62
SMG8-201ENST00000300917 COG3Q96JB2 828 aa18.89■□□□□ 0.62
SMG8-201ENST00000300917 PLEKHG5O94827 1062 aa18.89■□□□□ 0.61
SMG8-201ENST00000300917 NRXN3Q9Y4C0 1643 aa18.88■□□□□ 0.61
SMG8-201ENST00000300917 NLRP1Q9C000 1473 aa18.88■□□□□ 0.61
SMG8-201ENST00000300917 RGS3P49796 1198 aa18.88■□□□□ 0.61
SMG8-201ENST00000300917 PLEKHF1Q96S99 279 aa18.88■□□□□ 0.61
SMG8-201ENST00000300917 RARSP54136 660 aaKnown RBP18.87■□□□□ 0.61
SMG8-201ENST00000300917 EXOSC9Q06265 439 aaKnown RBP18.87■□□□□ 0.61
SMG8-201ENST00000300917 PHACTR3Q96KR7 559 aa18.87■□□□□ 0.61
SMG8-201ENST00000300917 ADAMTS13Q76LX8 1427 aa18.87■□□□□ 0.61
SMG8-201ENST00000300917 TRIM35Q9UPQ4 493 aa18.86■□□□□ 0.61
SMG8-201ENST00000300917 WDR63Q8IWG1 891 aa18.86■□□□□ 0.61
SMG8-201ENST00000300917 ACEP12821 1306 aa18.85■□□□□ 0.61
SMG8-201ENST00000300917 ERICH6Q7L0X2 663 aa18.85■□□□□ 0.61
SMG8-201ENST00000300917 NGEFQ8N5V2 710 aa18.85■□□□□ 0.61
SMG8-201ENST00000300917 USP32Q8NFA0 1604 aa18.85■□□□□ 0.61
SMG8-201ENST00000300917 NUTM2GQ5VZR2 741 aa18.85■□□□□ 0.61
SMG8-201ENST00000300917 MYH16Q9H6N6 1097 aa18.84■□□□□ 0.61
SMG8-201ENST00000300917 RLBP1P12271 317 aa18.84■□□□□ 0.61
SMG8-201ENST00000300917 NEFMP07197 916 aa18.84■□□□□ 0.61
SMG8-201ENST00000300917 PHF23Q9BUL5 403 aaPredicted RBP18.84■□□□□ 0.61
SMG8-201ENST00000300917 FANCIQ9NVI1 1328 aa18.83■□□□□ 0.61
SMG8-201ENST00000300917 THEMISQ8N1K5 641 aaPredicted RBP18.83■□□□□ 0.61
SMG8-201ENST00000300917 IQSEC2Q5JU85 1478 aa18.83■□□□□ 0.6
SMG8-201ENST00000300917 ELL2O00472 640 aaPredicted RBP18.83■□□□□ 0.6
SMG8-201ENST00000300917 TCERG1O14776 1098 aaKnown RBP18.82■□□□□ 0.6
SMG8-201ENST00000300917 DLC1Q96QB1 1528 aa18.82■□□□□ 0.6
SMG8-201ENST00000300917 SETD1AO15047 1707 aaKnown RBP18.82■□□□□ 0.6
SMG8-201ENST00000300917 PTPRUQ92729 1446 aa18.82■□□□□ 0.6
SMG8-201ENST00000300917 CPS1P31327 1500 aa18.81■□□□□ 0.6
SMG8-201ENST00000300917 PDE4AP27815 886 aa18.81■□□□□ 0.6
SMG8-201ENST00000300917 NGDNQ8NEJ9 315 aaKnown RBP18.81■□□□□ 0.6
SMG8-201ENST00000300917 UBR1Q8IWV7 1749 aa18.8■□□□□ 0.6
SMG8-201ENST00000300917 SMC4Q9NTJ3 1288 aa18.8■□□□□ 0.6
SMG8-201ENST00000300917 PLEKHG1Q9ULL1 1385 aa18.8■□□□□ 0.6
SMG8-201ENST00000300917 KCNA6P17658 529 aa18.8■□□□□ 0.6
SMG8-201ENST00000300917 IGHDP01880 384 aa18.8■□□□□ 0.6
SMG8-201ENST00000300917 DCTN1Q14203 1278 aa18.8■□□□□ 0.6
SMG8-201ENST00000300917 RSPH6AQ9H0K4 717 aa18.8■□□□□ 0.6
SMG8-201ENST00000300917 COL3A1P02461 1466 aaPredicted RBP18.79■□□□□ 0.6
SMG8-201ENST00000300917 ATP7BP35670 1465 aa18.79■□□□□ 0.6
SMG8-201ENST00000300917 CPSF1Q10570 1443 aaKnown RBP18.79■□□□□ 0.6
SMG8-201ENST00000300917 EDC4Q6P2E9 1401 aaKnown RBP18.79■□□□□ 0.6
SMG8-201ENST00000300917 CCDC27Q2M243 656 aa18.79■□□□□ 0.6
SMG8-201ENST00000300917 C14orf37Q86TY3 774 aa18.79■□□□□ 0.6
SMG8-201ENST00000300917 AEBP1Q8IUX7 1158 aa18.79■□□□□ 0.6
SMG8-201ENST00000300917 FAM83GA6ND36 823 aa18.78■□□□□ 0.6
SMG8-201ENST00000300917 TTC21BQ7Z4L5 1316 aa18.78■□□□□ 0.6
SMG8-201ENST00000300917 FAM135BQ49AJ0 1406 aa18.78■□□□□ 0.6
SMG8-201ENST00000300917 FCHSD2O94868 740 aa18.78■□□□□ 0.6
SMG8-201ENST00000300917 ANP32EQ9BTT0 268 aa18.77■□□□□ 0.6
SMG8-201ENST00000300917 IL13P35225 146 aa18.77■□□□□ 0.6
SMG8-201ENST00000300917 CENPQQ7L2Z9 268 aaPredicted RBP18.76■□□□□ 0.59
SMG8-201ENST00000300917 ZNF692Q9BU19 519 aaPredicted RBP18.76■□□□□ 0.59
SMG8-201ENST00000300917 KDM2BQ8NHM5 1336 aa18.76■□□□□ 0.59
SMG8-201ENST00000300917 PAK3O75914 559 aaPredicted RBP18.76■□□□□ 0.59
SMG8-201ENST00000300917 HSP90AB2PQ58FF8 381 aa18.76■□□□□ 0.59
SMG8-201ENST00000300917 FTSJ3Q8IY81 847 aaKnown RBP18.76■□□□□ 0.59
SMG8-201ENST00000300917 ANP32AP39687 249 aaKnown RBP18.76■□□□□ 0.59
SMG8-201ENST00000300917 SSH1Q8WYL5 1049 aa18.76■□□□□ 0.59
SMG8-201ENST00000300917 PNPLA6Q8IY17 1366 aa18.75■□□□□ 0.59
SMG8-201ENST00000300917 SIRT1Q96EB6 747 aa18.75■□□□□ 0.59
SMG8-201ENST00000300917 PDE3AQ14432 1141 aa18.74■□□□□ 0.59
SMG8-201ENST00000300917 SULT6B1Q6IMI4 303 aa18.74■□□□□ 0.59
SMG8-201ENST00000300917 TECPR2O15040 1411 aa18.74■□□□□ 0.59
SMG8-201ENST00000300917 TBX22Q9Y458 520 aa18.74■□□□□ 0.59
SMG8-201ENST00000300917 MED14O60244 1454 aa18.73■□□□□ 0.59
SMG8-201ENST00000300917 PNNQ9H307 717 aaKnown RBP18.73■□□□□ 0.59
SMG8-201ENST00000300917 C3P01024 1663 aa18.72■□□□□ 0.59
SMG8-201ENST00000300917 ZBTB7CA1YPR0 619 aa18.72■□□□□ 0.59
SMG8-201ENST00000300917 BACH2Q9BYV9 841 aa18.72■□□□□ 0.59
SMG8-201ENST00000300917 NFE2L2Q16236 605 aa18.71■□□□□ 0.59
SMG8-201ENST00000300917 NOB1Q9ULX3 412 aaKnown RBP18.71■□□□□ 0.59
SMG8-201ENST00000300917 PCDHB15Q9Y5E8 787 aa18.71■□□□□ 0.59
SMG8-201ENST00000300917 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.71■□□□□ 0.59
SMG8-201ENST00000300917 EIF4A2Q14240 407 aaKnown RBP18.71■□□□□ 0.59
SMG8-201ENST00000300917 KIF20BQ96Q89 1820 aa18.71■□□□□ 0.59
SMG8-201ENST00000300917 ITPRIPQ8IWB1 547 aa18.71■□□□□ 0.59
SMG8-201ENST00000300917 LRRC7Q96NW7 1537 aa18.71■□□□□ 0.59
SMG8-201ENST00000300917 MAP2P11137 1827 aaKnown RBP18.7■□□□□ 0.58
SMG8-201ENST00000300917 ZKSCAN2Q63HK3 967 aa18.7■□□□□ 0.58
SMG8-201ENST00000300917 TSPYL6Q8N831 410 aa18.7■□□□□ 0.58
SMG8-201ENST00000300917 LTV1Q96GA3 475 aaPredicted RBP18.7■□□□□ 0.58
SMG8-201ENST00000300917 NLRP6P59044 892 aa18.69■□□□□ 0.58
SMG8-201ENST00000300917 TRIM27P14373 513 aa18.69■□□□□ 0.58
SMG8-201ENST00000300917 DZIP1LQ8IYY4 767 aaKnown RBP18.69■□□□□ 0.58
SMG8-201ENST00000300917 CDC42BPGQ6DT37 1551 aa18.69■□□□□ 0.58
SMG8-201ENST00000300917 FER1L4A9Z1Z3 1794 aa18.68■□□□□ 0.58
SMG8-201ENST00000300917 PLEKHG3A1L390 1219 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms