RNA–Protein interactions for RNA: ENST00000299259.10

COPS2-201, Transcript of COP9 signalosome subunit 2, humanhuman

TSL 1 (best) BASIC

Gene COPS2, Length 2,036 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS2-201ENST00000299259 PDE3BQ13370 1112 aa13.95□□□□□ -0.18
COPS2-201ENST00000299259 SALL2Q9Y467 1007 aaPredicted RBP13.95□□□□□ -0.18
COPS2-201ENST00000299259 STRCP1A6NGW2 1772 aa13.95□□□□□ -0.18
COPS2-201ENST00000299259 PIK3C2AO00443 1686 aa13.95□□□□□ -0.18
COPS2-201ENST00000299259 IQSEC2Q5JU85 1478 aa13.94□□□□□ -0.18
COPS2-201ENST00000299259 CDK12Q9NYV4 1490 aaPredicted RBP13.94□□□□□ -0.18
COPS2-201ENST00000299259 USP54Q70EL1 1684 aa13.94□□□□□ -0.18
COPS2-201ENST00000299259 CCDC146Q8IYE0 955 aa13.94□□□□□ -0.18
COPS2-201ENST00000299259 SUPT16HQ9Y5B9 1047 aaKnown RBP13.94□□□□□ -0.18
COPS2-201ENST00000299259 LMTK3Q96Q04 1460 aa13.94□□□□□ -0.18
COPS2-201ENST00000299259 OVOS2A0A0J9YW53 1432 aa13.94□□□□□ -0.18
COPS2-201ENST00000299259 OVOS2Q6IE36 1432 aa13.94□□□□□ -0.18
COPS2-201ENST00000299259 SSH2Q76I76 1423 aa13.93□□□□□ -0.18
COPS2-201ENST00000299259 TTC21BQ7Z4L5 1316 aa13.93□□□□□ -0.18
COPS2-201ENST00000299259 COG3Q96JB2 828 aa13.93□□□□□ -0.18
COPS2-201ENST00000299259 STRCQ7RTU9 1775 aa13.93□□□□□ -0.18
COPS2-201ENST00000299259 AATKQ6ZMQ8 1374 aa13.92□□□□□ -0.18
COPS2-201ENST00000299259 MARF1Q9Y4F3 1742 aaKnown RBP13.92□□□□□ -0.18
COPS2-201ENST00000299259 PNPLA6Q8IY17 1366 aa13.92□□□□□ -0.18
COPS2-201ENST00000299259 KDM4FA0A1W2PPD8 638 aa13.91□□□□□ -0.18
COPS2-201ENST00000299259 FKBP8Q14318 412 aa13.91□□□□□ -0.18
COPS2-201ENST00000299259 PMFBP1Q8TBY8 1022 aa13.91□□□□□ -0.18
COPS2-201ENST00000299259 TTC21AQ8NDW8 1320 aa13.9□□□□□ -0.18
COPS2-201ENST00000299259 LRRC7Q96NW7 1537 aa13.9□□□□□ -0.18
COPS2-201ENST00000299259 NGDNQ8NEJ9 315 aaKnown RBP13.9□□□□□ -0.18
COPS2-201ENST00000299259 ZRANB1Q9UGI0 708 aa13.9□□□□□ -0.18
COPS2-201ENST00000299259 KIF1AQ12756 1690 aa13.89□□□□□ -0.19
COPS2-201ENST00000299259 ZNF521Q96K83 1311 aa13.89□□□□□ -0.19
COPS2-201ENST00000299259 APAF1O14727 1248 aa13.89□□□□□ -0.19
COPS2-201ENST00000299259 C14orf37Q86TY3 774 aa13.89□□□□□ -0.19
COPS2-201ENST00000299259 RBM33Q96EV2 1170 aaKnown RBP13.89□□□□□ -0.19
COPS2-201ENST00000299259 U2AF1L5P0DN76 240 aaPredicted RBP13.88□□□□□ -0.19
COPS2-201ENST00000299259 HSPA2P54652 639 aa13.88□□□□□ -0.19
COPS2-201ENST00000299259 U2AF1Q01081 240 aaKnown RBP eCLIP13.88□□□□□ -0.19
COPS2-201ENST00000299259 NGEFQ8N5V2 710 aa13.88□□□□□ -0.19
COPS2-201ENST00000299259 RUNDC1Q96C34 613 aa13.88□□□□□ -0.19
COPS2-201ENST00000299259 POLKQ9UBT6 870 aa13.88□□□□□ -0.19
COPS2-201ENST00000299259 PEAK1Q9H792 1746 aa13.88□□□□□ -0.19
COPS2-201ENST00000299259 DIAPH1O60610 1272 aaKnown RBP13.87□□□□□ -0.19
COPS2-201ENST00000299259 USP31Q70CQ4 1352 aa13.87□□□□□ -0.19
COPS2-201ENST00000299259 XIRP1Q702N8 1843 aaKnown RBP13.87□□□□□ -0.19
COPS2-201ENST00000299259 U2SURPO15042 1029 aaKnown RBP13.86□□□□□ -0.19
COPS2-201ENST00000299259 CDCA7LQ96GN5 454 aa13.86□□□□□ -0.19
COPS2-201ENST00000299259 PPM1GO15355 546 aaPredicted RBP13.86□□□□□ -0.19
COPS2-201ENST00000299259 EMILIN1Q9Y6C2 1016 aa13.86□□□□□ -0.19
COPS2-201ENST00000299259 FBLN1P23142 703 aa13.85□□□□□ -0.19
COPS2-201ENST00000299259 PROSER2Q86WR7 435 aaPredicted RBP13.85□□□□□ -0.19
COPS2-201ENST00000299259 PHF8Q9UPP1 1060 aa13.85□□□□□ -0.19
COPS2-201ENST00000299259 GOLGA2Q08379 1002 aa13.85□□□□□ -0.19
COPS2-201ENST00000299259 LTN1O94822 1766 aa13.84□□□□□ -0.19
COPS2-201ENST00000299259 DCCP43146 1447 aa13.84□□□□□ -0.19
COPS2-201ENST00000299259 RRS1Q15050 365 aaKnown RBP13.83□□□□□ -0.2
COPS2-201ENST00000299259 RGPD1P0DJD0 1748 aa13.83□□□□□ -0.2
COPS2-201ENST00000299259 TRPM3Q9HCF6 1732 aaPredicted RBP13.83□□□□□ -0.2
COPS2-201ENST00000299259 NCOA3Q9Y6Q9 1424 aa13.83□□□□□ -0.2
COPS2-201ENST00000299259 TCP11L2Q8N4U5 519 aa13.83□□□□□ -0.2
COPS2-201ENST00000299259 RNF123Q5XPI4 1314 aa13.83□□□□□ -0.2
COPS2-201ENST00000299259 IRX6P78412 446 aaPredicted RBP13.82□□□□□ -0.2
COPS2-201ENST00000299259 TMEM94Q12767 1356 aa13.82□□□□□ -0.2
COPS2-201ENST00000299259 RCAN3Q9UKA8 241 aa13.81□□□□□ -0.2
COPS2-201ENST00000299259 MAPK8IP3Q9UPT6 1336 aa13.81□□□□□ -0.2
COPS2-201ENST00000299259 ESCO1Q5FWF5 840 aa13.81□□□□□ -0.2
COPS2-201ENST00000299259 C1orf167Q5SNV9 1468 aa13.81□□□□□ -0.2
COPS2-201ENST00000299259 AEBP2Q6ZN18 517 aaPredicted RBP13.81□□□□□ -0.2
COPS2-201ENST00000299259 DLG5Q8TDM6 1919 aa13.81□□□□□ -0.2
COPS2-201ENST00000299259 DUSP27Q5VZP5 1158 aa13.8□□□□□ -0.2
COPS2-201ENST00000299259 PLEKHF1Q96S99 279 aa13.8□□□□□ -0.2
COPS2-201ENST00000299259 PNNQ9H307 717 aaKnown RBP13.8□□□□□ -0.2
COPS2-201ENST00000299259 C19orf44Q9H6X5 657 aa13.8□□□□□ -0.2
COPS2-201ENST00000299259 RRP7AQ9Y3A4 280 aaKnown RBP13.8□□□□□ -0.2
COPS2-201ENST00000299259 SLFN5Q08AF3 891 aa13.8□□□□□ -0.2
COPS2-201ENST00000299259 NCBP3Q53F19 620 aaKnown RBP13.8□□□□□ -0.2
COPS2-201ENST00000299259 WWC1Q8IX03 1113 aa13.8□□□□□ -0.2
COPS2-201ENST00000299259 MST1RQ04912 1400 aa13.79□□□□□ -0.2
COPS2-201ENST00000299259 E9PSI1 815 aa13.79□□□□□ -0.2
COPS2-201ENST00000299259 IL13P35225 146 aa13.79□□□□□ -0.2
COPS2-201ENST00000299259 NEUROD2Q15784 382 aa13.79□□□□□ -0.2
COPS2-201ENST00000299259 CCDC27Q2M243 656 aa13.79□□□□□ -0.2
COPS2-201ENST00000299259 ERICH6BQ5W0A0 696 aa13.79□□□□□ -0.2
COPS2-201ENST00000299259 PHF23Q9BUL5 403 aaPredicted RBP13.79□□□□□ -0.2
COPS2-201ENST00000299259 SBNO1A3KN83 1393 aa13.78□□□□□ -0.2
COPS2-201ENST00000299259 FLT4P35916 1363 aa13.78□□□□□ -0.2
COPS2-201ENST00000299259 PHRF1Q9P1Y6 1649 aaKnown RBP13.78□□□□□ -0.2
COPS2-201ENST00000299259 SOX12O15370 315 aa13.78□□□□□ -0.2
COPS2-201ENST00000299259 PAK3O75914 559 aaPredicted RBP13.78□□□□□ -0.2
COPS2-201ENST00000299259 FCHSD2O94868 740 aa13.78□□□□□ -0.2
COPS2-201ENST00000299259 NLRP6P59044 892 aa13.78□□□□□ -0.2
COPS2-201ENST00000299259 RSPH6AQ9H0K4 717 aa13.78□□□□□ -0.2
COPS2-201ENST00000299259 ALS2Q96Q42 1657 aa13.77□□□□□ -0.2
COPS2-201ENST00000299259 MAP3K19Q56UN5 1328 aa13.77□□□□□ -0.2
COPS2-201ENST00000299259 NFAT5O94916 1531 aa13.77□□□□□ -0.2
COPS2-201ENST00000299259 TRMT2AQ8IZ69 625 aaKnown RBP13.77□□□□□ -0.21
COPS2-201ENST00000299259 ABTB2Q8N961 1025 aa13.77□□□□□ -0.21
COPS2-201ENST00000299259 ATF3P18847 181 aa13.76□□□□□ -0.21
COPS2-201ENST00000299259 RRP1P56182 461 aaKnown RBP13.76□□□□□ -0.21
COPS2-201ENST00000299259 ORAI2Q96SN7 254 aa13.76□□□□□ -0.21
COPS2-201ENST00000299259 DMRT2Q9Y5R5 561 aa13.76□□□□□ -0.21
COPS2-201ENST00000299259 MSH6P52701 1360 aa13.76□□□□□ -0.21
COPS2-201ENST00000299259 NEFMP07197 916 aa13.76□□□□□ -0.21
COPS2-201ENST00000299259 PRKAR2BP31323 418 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms