RNA–Protein interactions for RNA: ENST00000298317.8

RPUSD4-201, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD4, Length 2,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-201ENST00000298317 BCL11BQ9C0K0 894 aaPredicted RBP16.83■□□□□ 0.28
RPUSD4-201ENST00000298317 ZBTB40Q9NUA8 1239 aa16.83■□□□□ 0.28
RPUSD4-201ENST00000298317 GOLGA6L22H0YM25 854 aa16.83■□□□□ 0.28
RPUSD4-201ENST00000298317 BMP2KLQ5H9B9 411 aa16.83■□□□□ 0.28
RPUSD4-201ENST00000298317 MAP7D2Q96T17 732 aa16.83■□□□□ 0.28
RPUSD4-201ENST00000298317 SSFA2P28290 1259 aa16.82■□□□□ 0.28
RPUSD4-201ENST00000298317 NOS1P29475 1434 aa16.82■□□□□ 0.28
RPUSD4-201ENST00000298317 TNNT2P45379 298 aaPredicted RBP16.81■□□□□ 0.28
RPUSD4-201ENST00000298317 ZNF445P59923 1031 aa16.81■□□□□ 0.28
RPUSD4-201ENST00000298317 MTHFSP49914 203 aa16.81■□□□□ 0.28
RPUSD4-201ENST00000298317 INO80Q9ULG1 1556 aaPredicted RBP16.81■□□□□ 0.28
RPUSD4-201ENST00000298317 SSH1Q8WYL5 1049 aa16.8■□□□□ 0.28
RPUSD4-201ENST00000298317 TSR2Q969E8 191 aaKnown RBP16.8■□□□□ 0.28
RPUSD4-201ENST00000298317 CFAP53Q96M91 514 aa16.8■□□□□ 0.28
RPUSD4-201ENST00000298317 IFT172Q9UG01 1749 aa16.8■□□□□ 0.28
RPUSD4-201ENST00000298317 ABCC1P33527 1531 aa16.8■□□□□ 0.28
RPUSD4-201ENST00000298317 BAG4O95429 457 aaKnown RBP16.8■□□□□ 0.28
RPUSD4-201ENST00000298317 ZC3H13Q5T200 1668 aaKnown RBP16.8■□□□□ 0.28
RPUSD4-201ENST00000298317 ZNF500O60304 480 aaPredicted RBP16.79■□□□□ 0.28
RPUSD4-201ENST00000298317 CHD1LQ86WJ1 897 aa16.79■□□□□ 0.28
RPUSD4-201ENST00000298317 TMEM57Q8N5G2 664 aa16.79■□□□□ 0.28
RPUSD4-201ENST00000298317 DDX49Q9Y6V7 483 aaKnown RBP16.79■□□□□ 0.28
RPUSD4-201ENST00000298317 EXOSC9Q06265 439 aaKnown RBP16.79■□□□□ 0.28
RPUSD4-201ENST00000298317 LNPKQ9C0E8 428 aa16.79■□□□□ 0.28
RPUSD4-201ENST00000298317 FOXD4L1Q9NU39 408 aa16.79■□□□□ 0.28
RPUSD4-201ENST00000298317 NOL7Q9UMY1 257 aaKnown RBP16.79■□□□□ 0.28
RPUSD4-201ENST00000298317 KIF16BQ96L93 1317 aa16.79■□□□□ 0.28
RPUSD4-201ENST00000298317 NRXN1Q9ULB1 1477 aa16.79■□□□□ 0.28
RPUSD4-201ENST00000298317 ABCC11Q96J66 1382 aa16.79■□□□□ 0.28
RPUSD4-201ENST00000298317 GAS2L2Q8NHY3 880 aa16.78■□□□□ 0.28
RPUSD4-201ENST00000298317 PDLIM2Q96JY6 352 aa16.78■□□□□ 0.28
RPUSD4-201ENST00000298317 ADGRF5Q8IZF2 1346 aa16.78■□□□□ 0.28
RPUSD4-201ENST00000298317 NOB1Q9ULX3 412 aaKnown RBP16.78■□□□□ 0.28
RPUSD4-201ENST00000298317 VWDEQ8N2E2 1590 aa16.78■□□□□ 0.28
RPUSD4-201ENST00000298317 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.77■□□□□ 0.28
RPUSD4-201ENST00000298317 CD109Q6YHK3 1445 aa16.77■□□□□ 0.27
RPUSD4-201ENST00000298317 TRAPPC8Q9Y2L5 1435 aa16.77■□□□□ 0.27
RPUSD4-201ENST00000298317 SETBP1Q9Y6X0 1596 aa16.76■□□□□ 0.27
RPUSD4-201ENST00000298317 R3HCC1Q9Y3T6 440 aaKnown RBP16.76■□□□□ 0.27
RPUSD4-201ENST00000298317 PLCH2O75038 1416 aa16.76■□□□□ 0.27
RPUSD4-201ENST00000298317 REREQ9P2R6 1566 aa16.76■□□□□ 0.27
RPUSD4-201ENST00000298317 MED14O60244 1454 aa16.75■□□□□ 0.27
RPUSD4-201ENST00000298317 U2AF1L5P0DN76 240 aaPredicted RBP16.75■□□□□ 0.27
RPUSD4-201ENST00000298317 U2AF1Q01081 240 aaKnown RBP eCLIP16.75■□□□□ 0.27
RPUSD4-201ENST00000298317 RBM42Q9BTD8 480 aaKnown RBP16.75■□□□□ 0.27
RPUSD4-201ENST00000298317 SLC12A5Q9H2X9 1139 aa16.75■□□□□ 0.27
RPUSD4-201ENST00000298317 ZFYVE16Q7Z3T8 1539 aa16.75■□□□□ 0.27
RPUSD4-201ENST00000298317 TBC1D9Q6ZT07 1266 aa16.74■□□□□ 0.27
RPUSD4-201ENST00000298317 ZSCAN23Q3MJ62 389 aa16.74■□□□□ 0.27
RPUSD4-201ENST00000298317 QRICH2Q9H0J4 1663 aa16.74■□□□□ 0.27
RPUSD4-201ENST00000298317 FAM13BQ9NYF5 915 aa16.74■□□□□ 0.27
RPUSD4-201ENST00000298317 PPRC1Q5VV67 1664 aaKnown RBP16.74■□□□□ 0.27
RPUSD4-201ENST00000298317 IL16Q14005 1332 aa16.73■□□□□ 0.27
RPUSD4-201ENST00000298317 UGGT1Q9NYU2 1555 aa16.73■□□□□ 0.27
RPUSD4-201ENST00000298317 NSD2O96028 1365 aa16.73■□□□□ 0.27
RPUSD4-201ENST00000298317 CYP2E1P05181 493 aaPredicted RBP16.73■□□□□ 0.27
RPUSD4-201ENST00000298317 TRIM35Q9UPQ4 493 aa16.73■□□□□ 0.27
RPUSD4-201ENST00000298317 UQCRHLA0A096LP55 91 aa16.72■□□□□ 0.27
RPUSD4-201ENST00000298317 UQCRHP07919 91 aa16.72■□□□□ 0.27
RPUSD4-201ENST00000298317 MTERF4Q7Z6M4 381 aaKnown RBP16.72■□□□□ 0.27
RPUSD4-201ENST00000298317 PLEKHF1Q96S99 279 aa16.72■□□□□ 0.27
RPUSD4-201ENST00000298317 RBSNQ9H1K0 784 aa16.72■□□□□ 0.27
RPUSD4-201ENST00000298317 KIF1BO60333 1816 aa16.72■□□□□ 0.27
RPUSD4-201ENST00000298317 IPO8O15397 1037 aaKnown RBP16.72■□□□□ 0.27
RPUSD4-201ENST00000298317 LMBRD1Q9NUN5 540 aa16.72■□□□□ 0.27
RPUSD4-201ENST00000298317 MROH2AA6NES4 1674 aa16.72■□□□□ 0.27
RPUSD4-201ENST00000298317 CAVIN1Q6NZI2 390 aaKnown RBP16.71■□□□□ 0.27
RPUSD4-201ENST00000298317 GCC1Q96CN9 775 aa16.71■□□□□ 0.27
RPUSD4-201ENST00000298317 ZKSCAN5Q9Y2L8 839 aa16.71■□□□□ 0.27
RPUSD4-201ENST00000298317 PPIP5K1Q6PFW1 1433 aa16.71■□□□□ 0.27
RPUSD4-201ENST00000298317 MCM5P33992 734 aa16.71■□□□□ 0.27
RPUSD4-201ENST00000298317 TMPOP42166 694 aaKnown RBP16.71■□□□□ 0.27
RPUSD4-201ENST00000298317 DYNC1I1O14576 645 aa16.7■□□□□ 0.26
RPUSD4-201ENST00000298317 NUCB2P80303 420 aa16.7■□□□□ 0.26
RPUSD4-201ENST00000298317 XPCQ01831 940 aaPredicted RBP16.7■□□□□ 0.26
RPUSD4-201ENST00000298317 CSPP1Q1MSJ5 1256 aa16.7■□□□□ 0.26
RPUSD4-201ENST00000298317 MCTP1Q6DN14 999 aa16.7■□□□□ 0.26
RPUSD4-201ENST00000298317 SMAP1Q8IYB5 467 aaPredicted RBP16.7■□□□□ 0.26
RPUSD4-201ENST00000298317 EFCAB2Q5VUJ9 269 aa16.69■□□□□ 0.26
RPUSD4-201ENST00000298317 AK9Q5TCS8 1911 aa16.69■□□□□ 0.26
RPUSD4-201ENST00000298317 ALDH1L2Q3SY69 923 aa16.69■□□□□ 0.26
RPUSD4-201ENST00000298317 SPAG9O60271 1321 aaKnown RBP16.69■□□□□ 0.26
RPUSD4-201ENST00000298317 PRIM1P49642 420 aaKnown RBP16.68■□□□□ 0.26
RPUSD4-201ENST00000298317 ANKRD45Q5TZF3 282 aa16.68■□□□□ 0.26
RPUSD4-201ENST00000298317 COL3A1P02461 1466 aaPredicted RBP16.68■□□□□ 0.26
RPUSD4-201ENST00000298317 RABEP1Q15276 862 aa16.68■□□□□ 0.26
RPUSD4-201ENST00000298317 CDC45O75419 566 aa16.67■□□□□ 0.26
RPUSD4-201ENST00000298317 ADGRB1O14514 1584 aa16.67■□□□□ 0.26
RPUSD4-201ENST00000298317 ANKRD36BQ8N2N9 1353 aa16.67■□□□□ 0.26
RPUSD4-201ENST00000298317 BRPF1P55201 1214 aaPredicted RBP16.66■□□□□ 0.26
RPUSD4-201ENST00000298317 MROH1Q8NDA8 1641 aa16.66■□□□□ 0.26
RPUSD4-201ENST00000298317 PIK3R4Q99570 1358 aa16.65■□□□□ 0.26
RPUSD4-201ENST00000298317 NCLP19338 710 aaKnown RBP16.65■□□□□ 0.26
RPUSD4-201ENST00000298317 SASS6Q6UVJ0 657 aa16.65■□□□□ 0.26
RPUSD4-201ENST00000298317 BBXQ8WY36 941 aaPredicted RBP16.65■□□□□ 0.26
RPUSD4-201ENST00000298317 ZBTB7BO15156 539 aaPredicted RBP16.65■□□□□ 0.26
RPUSD4-201ENST00000298317 GPT2Q8TD30 523 aa16.65■□□□□ 0.26
RPUSD4-201ENST00000298317 ADGRB3O60242 1522 aa16.65■□□□□ 0.26
RPUSD4-201ENST00000298317 PKP1Q13835 747 aa16.64■□□□□ 0.25
RPUSD4-201ENST00000298317 CCDC39Q9UFE4 941 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms