RNA–Protein interactions for RNA: ENST00000298274.12

PCDH11X-201, Transcript of protocadherin 11 X-linked, humanhuman

TSL 1 (best)

Gene PCDH11X, Length 4,767 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-201ENST00000298274 TOM1L2Q6ZVM7 507 aa15.25■□□□□ 0.03
PCDH11X-201ENST00000298274 VWDEQ8N2E2 1590 aa15.25■□□□□ 0.03
PCDH11X-201ENST00000298274 LTKP29376 864 aa15.25■□□□□ 0.03
PCDH11X-201ENST00000298274 CT47B1P0C2W7 299 aaPredicted RBP15.25■□□□□ 0.03
PCDH11X-201ENST00000298274 HSP90B1P14625 803 aaKnown RBP15.25■□□□□ 0.03
PCDH11X-201ENST00000298274 E9PCH4 1651 aa15.25■□□□□ 0.03
PCDH11X-201ENST00000298274 SETBP1Q9Y6X0 1596 aa15.24■□□□□ 0.03
PCDH11X-201ENST00000298274 PLEKHG3A1L390 1219 aa15.24■□□□□ 0.03
PCDH11X-201ENST00000298274 DDX58O95786 925 aaKnown RBP15.24■□□□□ 0.03
PCDH11X-201ENST00000298274 AAMPQ13685 434 aa15.24■□□□□ 0.03
PCDH11X-201ENST00000298274 FOXO3O43524 673 aa15.23■□□□□ 0.03
PCDH11X-201ENST00000298274 RIPK4P57078 832 aa15.23■□□□□ 0.03
PCDH11X-201ENST00000298274 FER1L4A9Z1Z3 1794 aa15.22■□□□□ 0.03
PCDH11X-201ENST00000298274 C11orf95C9JLR9 678 aaPredicted RBP15.22■□□□□ 0.03
PCDH11X-201ENST00000298274 DISP3Q9P2K9 1392 aa15.22■□□□□ 0.03
PCDH11X-201ENST00000298274 NCOA3Q9Y6Q9 1424 aa15.22■□□□□ 0.03
PCDH11X-201ENST00000298274 CDCA7Q9BWT1 371 aaPredicted RBP15.22■□□□□ 0.03
PCDH11X-201ENST00000298274 RIMS1Q86UR5 1692 aaKnown RBP15.22■□□□□ 0.03
PCDH11X-201ENST00000298274 FKBP8Q14318 412 aa15.21■□□□□ 0.03
PCDH11X-201ENST00000298274 NKTRP30414 1462 aaKnown RBP15.21■□□□□ 0.03
PCDH11X-201ENST00000298274 SF3B2Q13435 895 aaKnown RBP15.21■□□□□ 0.02
PCDH11X-201ENST00000298274 CASC1Q6TDU7 716 aa15.21■□□□□ 0.02
PCDH11X-201ENST00000298274 NUTM2GQ5VZR2 741 aa15.2■□□□□ 0.02
PCDH11X-201ENST00000298274 ZNF428Q96B54 188 aa15.2■□□□□ 0.02
PCDH11X-201ENST00000298274 ATP7BP35670 1465 aa15.2■□□□□ 0.02
PCDH11X-201ENST00000298274 CEP170BQ9Y4F5 1589 aaPredicted RBP15.2■□□□□ 0.02
PCDH11X-201ENST00000298274 MROH2AA6NES4 1674 aa15.2■□□□□ 0.02
PCDH11X-201ENST00000298274 PREX1Q8TCU6 1659 aa15.2■□□□□ 0.02
PCDH11X-201ENST00000298274 HMMRO75330 724 aa15.2■□□□□ 0.02
PCDH11X-201ENST00000298274 RCAN3Q9UKA8 241 aa15.2■□□□□ 0.02
PCDH11X-201ENST00000298274 KDM5AP29375 1690 aaKnown RBP15.2■□□□□ 0.02
PCDH11X-201ENST00000298274 DLC1Q96QB1 1528 aa15.19■□□□□ 0.02
PCDH11X-201ENST00000298274 TESK2Q96S53 571 aa15.19■□□□□ 0.02
PCDH11X-201ENST00000298274 API5Q9BZZ5 524 aaKnown RBP15.19■□□□□ 0.02
PCDH11X-201ENST00000298274 PTCH1Q13635 1447 aa15.18■□□□□ 0.02
PCDH11X-201ENST00000298274 WDR63Q8IWG1 891 aa15.18■□□□□ 0.02
PCDH11X-201ENST00000298274 FRAT1Q92837 279 aaPredicted RBP15.18■□□□□ 0.02
PCDH11X-201ENST00000298274 SETD1BQ9UPS6 1966 aaKnown RBP15.18■□□□□ 0.02
PCDH11X-201ENST00000298274 NUTM2BA6NNL0 878 aaPredicted RBP15.18■□□□□ 0.02
PCDH11X-201ENST00000298274 NUTM2EB1AL46 878 aaPredicted RBP15.18■□□□□ 0.02
PCDH11X-201ENST00000298274 NEXNQ0ZGT2 675 aa15.18■□□□□ 0.02
PCDH11X-201ENST00000298274 NUTM2AQ8IVF1 878 aaPredicted RBP15.18■□□□□ 0.02
PCDH11X-201ENST00000298274 BCORL1Q5H9F3 1711 aa15.18■□□□□ 0.02
PCDH11X-201ENST00000298274 CCDC146Q8IYE0 955 aa15.17■□□□□ 0.02
PCDH11X-201ENST00000298274 SMC4Q9NTJ3 1288 aa15.17■□□□□ 0.02
PCDH11X-201ENST00000298274 FRMPD1Q5SYB0 1578 aa15.17■□□□□ 0.02
PCDH11X-201ENST00000298274 TMEM94Q12767 1356 aa15.17■□□□□ 0.02
PCDH11X-201ENST00000298274 STRN4Q9NRL3 753 aa15.17■□□□□ 0.02
PCDH11X-201ENST00000298274 KIF16BQ96L93 1317 aa15.17■□□□□ 0.02
PCDH11X-201ENST00000298274 SLAIN2Q9P270 581 aa15.17■□□□□ 0.02
PCDH11X-201ENST00000298274 CFAP65Q6ZU64 1925 aaKnown RBP15.16■□□□□ 0.02
PCDH11X-201ENST00000298274 GTF3C3Q9Y5Q9 886 aa15.16■□□□□ 0.02
PCDH11X-201ENST00000298274 FLT4P35916 1363 aa15.16■□□□□ 0.02
PCDH11X-201ENST00000298274 NME9Q86XW9 330 aa15.16■□□□□ 0.02
PCDH11X-201ENST00000298274 APAF1O14727 1248 aa15.15■□□□□ 0.02
PCDH11X-201ENST00000298274 PRKAR2BP31323 418 aa15.15■□□□□ 0.02
PCDH11X-201ENST00000298274 TSPYL4Q9UJ04 414 aa15.15■□□□□ 0.02
PCDH11X-201ENST00000298274 OS9Q13438 667 aaPredicted RBP15.15■□□□□ 0.02
PCDH11X-201ENST00000298274 ZNF530Q6P9A1 599 aaPredicted RBP15.15■□□□□ 0.02
PCDH11X-201ENST00000298274 ALKQ9UM73 1620 aa15.14■□□□□ 0.01
PCDH11X-201ENST00000298274 NGLY1Q96IV0 654 aa15.14■□□□□ 0.01
PCDH11X-201ENST00000298274 SULT6B1Q6IMI4 303 aa15.14■□□□□ 0.01
PCDH11X-201ENST00000298274 ADGRL3Q9HAR2 1447 aa15.14■□□□□ 0.01
PCDH11X-201ENST00000298274 KIAA1210Q9ULL0 1709 aa15.14■□□□□ 0.01
PCDH11X-201ENST00000298274 KIF24Q5T7B8 1368 aa15.13■□□□□ 0.01
PCDH11X-201ENST00000298274 PPP4R2Q9NY27 417 aa15.13■□□□□ 0.01
PCDH11X-201ENST00000298274 HTATSF1O43719 755 aaKnown RBP15.13■□□□□ 0.01
PCDH11X-201ENST00000298274 METP08581 1390 aa15.13■□□□□ 0.01
PCDH11X-201ENST00000298274 NFE2L2Q16236 605 aa15.12■□□□□ 0.01
PCDH11X-201ENST00000298274 KIF13AQ9H1H9 1805 aa15.12■□□□□ 0.01
PCDH11X-201ENST00000298274 WWC1Q8IX03 1113 aa15.12■□□□□ 0.01
PCDH11X-201ENST00000298274 POLR3AO14802 1390 aaPredicted RBP15.12■□□□□ 0.01
PCDH11X-201ENST00000298274 PIK3C2BO00750 1634 aa15.12■□□□□ 0.01
PCDH11X-201ENST00000298274 CABP4P57796 275 aa15.12■□□□□ 0.01
PCDH11X-201ENST00000298274 ZC3H6P61129 1189 aaKnown RBP15.11■□□□□ 0.01
PCDH11X-201ENST00000298274 RWDD1Q9H446 243 aaPredicted RBP15.11■□□□□ 0.01
PCDH11X-201ENST00000298274 CCDC30Q5VVM6 783 aa15.11■□□□□ 0.01
PCDH11X-201ENST00000298274 HMOX1P09601 288 aa15.11■□□□□ 0.01
PCDH11X-201ENST00000298274 TCP11L2Q8N4U5 519 aa15.11■□□□□ 0.01
PCDH11X-201ENST00000298274 MADDQ8WXG6 1647 aa15.11■□□□□ 0.01
PCDH11X-201ENST00000298274 ZKSCAN2Q63HK3 967 aa15.11■□□□□ 0.01
PCDH11X-201ENST00000298274 A0A1W2PP64 1363 aa15.1■□□□□ 0.01
PCDH11X-201ENST00000298274 GNAT3A8MTJ3 354 aa15.1■□□□□ 0.01
PCDH11X-201ENST00000298274 XPCQ01831 940 aaPredicted RBP15.09■□□□□ 0.01
PCDH11X-201ENST00000298274 FYB1O15117 783 aa15.09■□□□□ 0.01
PCDH11X-201ENST00000298274 TEX13AQ9BXU3 409 aaPredicted RBP15.09■□□□□ 0.01
PCDH11X-201ENST00000298274 SBNO1A3KN83 1393 aa15.09■□□□□ 0.01
PCDH11X-201ENST00000298274 MYO3AQ8NEV4 1616 aa15.09■□□□□ 0.01
PCDH11X-201ENST00000298274 NEXMIFQ5QGS0 1516 aa15.09■□□□□ 0.01
PCDH11X-201ENST00000298274 EXOC5O00471 708 aa15.09■□□□□ 0.01
PCDH11X-201ENST00000298274 GPATCH3Q96I76 525 aa15.08■□□□□ 0.01
PCDH11X-201ENST00000298274 INSRP06213 1382 aa15.08■□□□□ 0.01
PCDH11X-201ENST00000298274 NCBP3Q53F19 620 aaKnown RBP15.08■□□□□ 0
PCDH11X-201ENST00000298274 ADAMTS8Q9UP79 889 aa15.08■□□□□ 0
PCDH11X-201ENST00000298274 RTL1A6NKG5 1358 aa15.07■□□□□ 0
PCDH11X-201ENST00000298274 SLIT1O75093 1534 aa15.07■□□□□ 0
PCDH11X-201ENST00000298274 GTF2E1P29083 439 aaPredicted RBP15.07■□□□□ 0
PCDH11X-201ENST00000298274 RRS1Q15050 365 aaKnown RBP15.07■□□□□ 0
PCDH11X-201ENST00000298274 TRPM1Q7Z4N2 1603 aa15.07■□□□□ 0
PCDH11X-201ENST00000298274 ANKRD24Q8TF21 1146 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms