RNA–Protein interactions for RNA: ENST00000297933.10

GAPVD1-202, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GAPVD1, Length 6,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-202ENST00000297933 BICD2Q8TD16 824 aa8.36□□□□□ -1.07
GAPVD1-202ENST00000297933 CD109Q6YHK3 1445 aa8.36□□□□□ -1.07
GAPVD1-202ENST00000297933 SURF6O75683 361 aaKnown RBP8.35□□□□□ -1.07
GAPVD1-202ENST00000297933 FAM161AQ3B820 660 aa8.35□□□□□ -1.07
GAPVD1-202ENST00000297933 HDGFL1Q5TGJ6 251 aa8.35□□□□□ -1.07
GAPVD1-202ENST00000297933 HFM1A2PYH4 1435 aa8.35□□□□□ -1.07
GAPVD1-202ENST00000297933 HECW1Q76N89 1606 aa8.35□□□□□ -1.07
GAPVD1-202ENST00000297933 KDM4AO75164 1064 aa8.35□□□□□ -1.07
GAPVD1-202ENST00000297933 ODF2Q5BJF6 829 aa8.35□□□□□ -1.07
GAPVD1-202ENST00000297933 CT47A1Q5JQC4 288 aaPredicted RBP8.35□□□□□ -1.07
GAPVD1-202ENST00000297933 ZSCAN29Q8IWY8 852 aaPredicted RBP8.35□□□□□ -1.07
GAPVD1-202ENST00000297933 KCNH5Q8NCM2 988 aa8.35□□□□□ -1.07
GAPVD1-202ENST00000297933 SMC3Q9UQE7 1217 aa8.35□□□□□ -1.07
GAPVD1-202ENST00000297933 ZPR1O75312 459 aa8.35□□□□□ -1.07
GAPVD1-202ENST00000297933 EXOC6Q8TAG9 804 aa8.35□□□□□ -1.07
GAPVD1-202ENST00000297933 CCDC70Q6NSX1 233 aa8.35□□□□□ -1.07
GAPVD1-202ENST00000297933 PSMA5P28066 241 aa8.35□□□□□ -1.07
GAPVD1-202ENST00000297933 EPS15P42566 896 aa8.35□□□□□ -1.07
GAPVD1-202ENST00000297933 CCDC57Q2TAC2 916 aa8.35□□□□□ -1.07
GAPVD1-202ENST00000297933 VPS37CA5D8V6 355 aaPredicted RBP8.34□□□□□ -1.07
GAPVD1-202ENST00000297933 WDHD1O75717 1129 aaPredicted RBP8.34□□□□□ -1.07
GAPVD1-202ENST00000297933 STARD3NLO95772 234 aa8.34□□□□□ -1.07
GAPVD1-202ENST00000297933 PAXIP1Q6ZW49 1069 aaPredicted RBP8.34□□□□□ -1.07
GAPVD1-202ENST00000297933 BTBD11A6QL63 1104 aa8.34□□□□□ -1.07
GAPVD1-202ENST00000297933 ZNF652Q9Y2D9 606 aa8.34□□□□□ -1.07
GAPVD1-202ENST00000297933 EHBP1L1Q8N3D4 1523 aa8.34□□□□□ -1.07
GAPVD1-202ENST00000297933 TMOD2Q9NZR1 351 aa8.34□□□□□ -1.07
GAPVD1-202ENST00000297933 RBM19Q9Y4C8 960 aaKnown RBP8.34□□□□□ -1.07
GAPVD1-202ENST00000297933 TWISTNBQ3B726 338 aaPredicted RBP8.34□□□□□ -1.08
GAPVD1-202ENST00000297933 CDK5RAP3Q96JB5 506 aa8.34□□□□□ -1.08
GAPVD1-202ENST00000297933 TROQ12816 1431 aaPredicted RBP8.33□□□□□ -1.08
GAPVD1-202ENST00000297933 HIP1O00291 1037 aa8.33□□□□□ -1.08
GAPVD1-202ENST00000297933 TMOD3Q9NYL9 352 aa8.33□□□□□ -1.08
GAPVD1-202ENST00000297933 EFCAB5A4FU69 1503 aa8.33□□□□□ -1.08
GAPVD1-202ENST00000297933 EPRSP07814 1512 aaKnown RBP8.33□□□□□ -1.08
GAPVD1-202ENST00000297933 NACAP1Q9BZK3 213 aa8.33□□□□□ -1.08
GAPVD1-202ENST00000297933 LNPKQ9C0E8 428 aa8.33□□□□□ -1.08
GAPVD1-202ENST00000297933 DDX49Q9Y6V7 483 aaKnown RBP8.33□□□□□ -1.08
GAPVD1-202ENST00000297933 ZBED9Q6R2W3 1325 aa8.33□□□□□ -1.08
GAPVD1-202ENST00000297933 IGHMBP2P38935 993 aaKnown RBP8.33□□□□□ -1.08
GAPVD1-202ENST00000297933 MPHOSPH10O00566 681 aaKnown RBP8.33□□□□□ -1.08
GAPVD1-202ENST00000297933 CCAR2Q8N163 923 aaKnown RBP8.33□□□□□ -1.08
GAPVD1-202ENST00000297933 FBXO3Q9UK99 471 aa8.33□□□□□ -1.08
GAPVD1-202ENST00000297933 PPP6R1Q9UPN7 881 aa8.33□□□□□ -1.08
GAPVD1-202ENST00000297933 KIF7Q2M1P5 1343 aa8.32□□□□□ -1.08
GAPVD1-202ENST00000297933 PAF1Q8N7H5 531 aa8.32□□□□□ -1.08
GAPVD1-202ENST00000297933 ZNF428Q96B54 188 aa8.32□□□□□ -1.08
GAPVD1-202ENST00000297933 GNAI2P04899 355 aa8.32□□□□□ -1.08
GAPVD1-202ENST00000297933 TCP11L2Q8N4U5 519 aa8.32□□□□□ -1.08
GAPVD1-202ENST00000297933 SLC12A5Q9H2X9 1139 aa8.32□□□□□ -1.08
GAPVD1-202ENST00000297933 SLC4A2P04920 1241 aa8.32□□□□□ -1.08
GAPVD1-202ENST00000297933 LRPPRCP42704 1394 aaKnown RBP8.32□□□□□ -1.08
GAPVD1-202ENST00000297933 CCDC7Q96M83 1385 aa8.32□□□□□ -1.08
GAPVD1-202ENST00000297933 POLA1P09884 1462 aaPredicted RBP8.32□□□□□ -1.08
GAPVD1-202ENST00000297933 STK11IPQ8N1F8 1099 aa8.32□□□□□ -1.08
GAPVD1-202ENST00000297933 NUDT16Q96DE0 195 aaKnown RBP8.32□□□□□ -1.08
GAPVD1-202ENST00000297933 ZSCAN25Q6NSZ9 544 aa8.31□□□□□ -1.08
GAPVD1-202ENST00000297933 SIL1Q9H173 461 aa8.31□□□□□ -1.08
GAPVD1-202ENST00000297933 CCDC73Q6ZRK6 1079 aa8.31□□□□□ -1.08
GAPVD1-202ENST00000297933 KRT18P05783 430 aaKnown RBP8.31□□□□□ -1.08
GAPVD1-202ENST00000297933 RRS1Q15050 365 aaKnown RBP8.31□□□□□ -1.08
GAPVD1-202ENST00000297933 ZFYVE27Q5T4F4 411 aa8.31□□□□□ -1.08
GAPVD1-202ENST00000297933 ATAD2Q6PL18 1390 aa8.31□□□□□ -1.08
GAPVD1-202ENST00000297933 DNMBPQ6XZF7 1577 aa8.31□□□□□ -1.08
GAPVD1-202ENST00000297933 IPO9Q96P70 1041 aaKnown RBP8.31□□□□□ -1.08
GAPVD1-202ENST00000297933 NAP1L1P55209 391 aaKnown RBP8.31□□□□□ -1.08
GAPVD1-202ENST00000297933 SKOR2Q2VWA4 1001 aaPredicted RBP8.31□□□□□ -1.08
GAPVD1-202ENST00000297933 ERICH3Q5RHP9 1530 aa8.31□□□□□ -1.08
GAPVD1-202ENST00000297933 TTLL12Q14166 644 aaPredicted RBP8.31□□□□□ -1.08
GAPVD1-202ENST00000297933 HMGXB3Q12766 1538 aa8.3□□□□□ -1.08
GAPVD1-202ENST00000297933 PPP2R1AP30153 589 aa8.3□□□□□ -1.08
GAPVD1-202ENST00000297933 SRCIN1Q9C0H9 1055 aa8.3□□□□□ -1.08
GAPVD1-202ENST00000297933 RAI14Q9P0K7 980 aa8.3□□□□□ -1.08
GAPVD1-202ENST00000297933 CDC45O75419 566 aa8.3□□□□□ -1.08
GAPVD1-202ENST00000297933 CCT4P50991 539 aaKnown RBP8.3□□□□□ -1.08
GAPVD1-202ENST00000297933 ANKRD30BQ9BXX2 1392 aa8.3□□□□□ -1.08
GAPVD1-202ENST00000297933 EXOSC9Q06265 439 aaKnown RBP8.3□□□□□ -1.08
GAPVD1-202ENST00000297933 SASS6Q6UVJ0 657 aa8.3□□□□□ -1.08
GAPVD1-202ENST00000297933 PANK1Q8TE04 598 aa8.3□□□□□ -1.08
GAPVD1-202ENST00000297933 ADAMTS8Q9UP79 889 aa8.3□□□□□ -1.08
GAPVD1-202ENST00000297933 AAMPQ13685 434 aa8.3□□□□□ -1.08
GAPVD1-202ENST00000297933 NBPF1Q3BBV0 1214 aa8.3□□□□□ -1.08
GAPVD1-202ENST00000297933 OFD1O75665 1012 aa8.29□□□□□ -1.08
GAPVD1-202ENST00000297933 CEBPAP49715 358 aaPredicted RBP8.29□□□□□ -1.08
GAPVD1-202ENST00000297933 SOGA3Q5TF21 947 aa8.29□□□□□ -1.08
GAPVD1-202ENST00000297933 OLFM4Q6UX06 510 aa8.29□□□□□ -1.08
GAPVD1-202ENST00000297933 AKNAQ7Z591 1439 aa8.29□□□□□ -1.08
GAPVD1-202ENST00000297933 TXLNAP40222 546 aa8.29□□□□□ -1.08
GAPVD1-202ENST00000297933 KIAA1107Q9UPP5 1409 aa8.29□□□□□ -1.08
GAPVD1-202ENST00000297933 UBAP1LF5GYI3 381 aa8.29□□□□□ -1.08
GAPVD1-202ENST00000297933 TOM1O60784 492 aa8.29□□□□□ -1.08
GAPVD1-202ENST00000297933 EXOC5O00471 708 aa8.29□□□□□ -1.08
GAPVD1-202ENST00000297933 ATP2B1P20020 1258 aa8.29□□□□□ -1.08
GAPVD1-202ENST00000297933 CCDC69A6NI79 296 aa8.28□□□□□ -1.08
GAPVD1-202ENST00000297933 GNAT3A8MTJ3 354 aa8.28□□□□□ -1.08
GAPVD1-202ENST00000297933 BCL11BQ9C0K0 894 aaPredicted RBP8.28□□□□□ -1.08
GAPVD1-202ENST00000297933 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.28□□□□□ -1.08
GAPVD1-202ENST00000297933 ADGRL1O94910 1474 aa8.28□□□□□ -1.08
GAPVD1-202ENST00000297933 PDE4AP27815 886 aa8.28□□□□□ -1.08
GAPVD1-202ENST00000297933 FKBP4Q02790 459 aaKnown RBP eCLIP8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms