RNA–Protein interactions for RNA: ENST00000297784.9

TMC1-201, Transcript of transmembrane channel like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMC1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-201ENST00000297784 ADGRL3Q9HAR2 1447 aa8.84□□□□□ -0.99
TMC1-201ENST00000297784 NLRP13Q86W25 1043 aa8.84□□□□□ -0.99
TMC1-201ENST00000297784 TERF2IPQ9NYB0 399 aa8.84□□□□□ -0.99
TMC1-201ENST00000297784 CGNL1Q0VF96 1302 aa8.83□□□□□ -1
TMC1-201ENST00000297784 SSH2Q76I76 1423 aa8.83□□□□□ -1
TMC1-201ENST00000297784 IRX6P78412 446 aaPredicted RBP8.83□□□□□ -1
TMC1-201ENST00000297784 IPO9Q96P70 1041 aaKnown RBP8.83□□□□□ -1
TMC1-201ENST00000297784 ACEP12821 1306 aa8.83□□□□□ -1
TMC1-201ENST00000297784 RTL5Q5HYW3 569 aaPredicted RBP8.82□□□□□ -1
TMC1-201ENST00000297784 POLR3AO14802 1390 aaPredicted RBP8.82□□□□□ -1
TMC1-201ENST00000297784 NBR1Q14596 966 aa8.82□□□□□ -1
TMC1-201ENST00000297784 FAM9BQ8IZU0 186 aa8.82□□□□□ -1
TMC1-201ENST00000297784 ANKARQ7Z5J8 1434 aa8.82□□□□□ -1
TMC1-201ENST00000297784 HDGFL2Q7Z4V5 671 aaPredicted RBP8.82□□□□□ -1
TMC1-201ENST00000297784 PMFBP1Q8TBY8 1022 aa8.82□□□□□ -1
TMC1-201ENST00000297784 GGNBP2Q9H3C7 697 aa8.82□□□□□ -1
TMC1-201ENST00000297784 MARF1Q9Y4F3 1742 aaKnown RBP8.82□□□□□ -1
TMC1-201ENST00000297784 EDC4Q6P2E9 1401 aaKnown RBP8.82□□□□□ -1
TMC1-201ENST00000297784 MAP2P11137 1827 aaKnown RBP8.81□□□□□ -1
TMC1-201ENST00000297784 ZRANB1Q9UGI0 708 aa8.81□□□□□ -1
TMC1-201ENST00000297784 NSD2O96028 1365 aa8.81□□□□□ -1
TMC1-201ENST00000297784 SHPRHQ149N8 1683 aa8.81□□□□□ -1
TMC1-201ENST00000297784 PROSER2Q86WR7 435 aaPredicted RBP8.81□□□□□ -1
TMC1-201ENST00000297784 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.81□□□□□ -1
TMC1-201ENST00000297784 USP6P35125 1406 aa8.81□□□□□ -1
TMC1-201ENST00000297784 ZNF335Q9H4Z2 1342 aaPredicted RBP8.81□□□□□ -1
TMC1-201ENST00000297784 TMEM94Q12767 1356 aa8.81□□□□□ -1
TMC1-201ENST00000297784 FBLN1P23142 703 aa8.8□□□□□ -1
TMC1-201ENST00000297784 ZBED9Q6R2W3 1325 aa8.8□□□□□ -1
TMC1-201ENST00000297784 ANP32AP39687 249 aaKnown RBP8.8□□□□□ -1
TMC1-201ENST00000297784 TNNT2P45379 298 aaPredicted RBP8.8□□□□□ -1
TMC1-201ENST00000297784 MORC1Q86VD1 984 aa8.8□□□□□ -1
TMC1-201ENST00000297784 NME9Q86XW9 330 aa8.8□□□□□ -1
TMC1-201ENST00000297784 ZNF692Q9BU19 519 aaPredicted RBP8.8□□□□□ -1
TMC1-201ENST00000297784 LRRC7Q96NW7 1537 aa8.8□□□□□ -1
TMC1-201ENST00000297784 PIK3C2AO00443 1686 aa8.79□□□□□ -1
TMC1-201ENST00000297784 B4GALNT3Q6L9W6 998 aa8.79□□□□□ -1
TMC1-201ENST00000297784 USP35Q9P2H5 1018 aa8.79□□□□□ -1
TMC1-201ENST00000297784 C19orf44Q9H6X5 657 aa8.79□□□□□ -1
TMC1-201ENST00000297784 ORAI2Q96SN7 254 aa8.78□□□□□ -1
TMC1-201ENST00000297784 NCOA3Q9Y6Q9 1424 aa8.78□□□□□ -1
TMC1-201ENST00000297784 PIAS4Q8N2W9 510 aaPredicted RBP8.78□□□□□ -1
TMC1-201ENST00000297784 TTC21BQ7Z4L5 1316 aa8.78□□□□□ -1
TMC1-201ENST00000297784 ZBTB47Q9UFB7 747 aaPredicted RBP8.78□□□□□ -1
TMC1-201ENST00000297784 MTHFSP49914 203 aa8.77□□□□□ -1.01
TMC1-201ENST00000297784 IL27Q8NEV9 243 aa8.77□□□□□ -1.01
TMC1-201ENST00000297784 MST1RQ04912 1400 aa8.77□□□□□ -1.01
TMC1-201ENST00000297784 C1orf167Q5SNV9 1468 aa8.77□□□□□ -1.01
TMC1-201ENST00000297784 RNF123Q5XPI4 1314 aa8.77□□□□□ -1.01
TMC1-201ENST00000297784 ADAMTS8Q9UP79 889 aa8.77□□□□□ -1.01
TMC1-201ENST00000297784 USP54Q70EL1 1684 aa8.77□□□□□ -1.01
TMC1-201ENST00000297784 COL3A1P02461 1466 aaPredicted RBP8.77□□□□□ -1.01
TMC1-201ENST00000297784 OVOS2A0A0J9YW53 1432 aa8.77□□□□□ -1.01
TMC1-201ENST00000297784 OVOS2Q6IE36 1432 aa8.77□□□□□ -1.01
TMC1-201ENST00000297784 SENP3-EIF4A1A0A087X0R7 540 aa8.76□□□□□ -1.01
TMC1-201ENST00000297784 ESCO1Q5FWF5 840 aa8.76□□□□□ -1.01
TMC1-201ENST00000297784 TRPM3Q9HCF6 1732 aaPredicted RBP8.76□□□□□ -1.01
TMC1-201ENST00000297784 DCCP43146 1447 aa8.76□□□□□ -1.01
TMC1-201ENST00000297784 C14orf37Q86TY3 774 aa8.76□□□□□ -1.01
TMC1-201ENST00000297784 PHF8Q9UPP1 1060 aa8.76□□□□□ -1.01
TMC1-201ENST00000297784 SMG6Q86US8 1419 aaKnown RBP8.75□□□□□ -1.01
TMC1-201ENST00000297784 PNPLA6Q8IY17 1366 aa8.75□□□□□ -1.01
TMC1-201ENST00000297784 NGDNQ8NEJ9 315 aaKnown RBP8.75□□□□□ -1.01
TMC1-201ENST00000297784 CCDC136Q96JN2 1154 aa8.75□□□□□ -1.01
TMC1-201ENST00000297784 POLKQ9UBT6 870 aa8.75□□□□□ -1.01
TMC1-201ENST00000297784 BLMP54132 1417 aaPredicted RBP8.75□□□□□ -1.01
TMC1-201ENST00000297784 PEAK1Q9H792 1746 aa8.75□□□□□ -1.01
TMC1-201ENST00000297784 KIF1AQ12756 1690 aa8.74□□□□□ -1.01
TMC1-201ENST00000297784 AATKQ6ZMQ8 1374 aa8.74□□□□□ -1.01
TMC1-201ENST00000297784 USP31Q70CQ4 1352 aa8.74□□□□□ -1.01
TMC1-201ENST00000297784 LTBP4Q8N2S1 1624 aa8.74□□□□□ -1.01
TMC1-201ENST00000297784 FOXO3O43524 673 aa8.73□□□□□ -1.01
TMC1-201ENST00000297784 TTC21AQ8NDW8 1320 aa8.73□□□□□ -1.01
TMC1-201ENST00000297784 DDX17Q92841 729 aaKnown RBP8.73□□□□□ -1.01
TMC1-201ENST00000297784 EMILIN1Q9Y6C2 1016 aa8.73□□□□□ -1.01
TMC1-201ENST00000297784 INSRP06213 1382 aa8.73□□□□□ -1.01
TMC1-201ENST00000297784 RRS1Q15050 365 aaKnown RBP8.73□□□□□ -1.01
TMC1-201ENST00000297784 COG3Q96JB2 828 aa8.73□□□□□ -1.01
TMC1-201ENST00000297784 DMRT2Q9Y5R5 561 aa8.73□□□□□ -1.01
TMC1-201ENST00000297784 ALS2Q96Q42 1657 aa8.72□□□□□ -1.01
TMC1-201ENST00000297784 ADRA2BP18089 450 aa8.72□□□□□ -1.01
TMC1-201ENST00000297784 ATF3P18847 181 aa8.72□□□□□ -1.01
TMC1-201ENST00000297784 XPCQ01831 940 aaPredicted RBP8.72□□□□□ -1.01
TMC1-201ENST00000297784 MSH6P52701 1360 aa8.71□□□□□ -1.01
TMC1-201ENST00000297784 CADPS2Q86UW7 1296 aa8.71□□□□□ -1.01
TMC1-201ENST00000297784 NUTM2GQ5VZR2 741 aa8.71□□□□□ -1.02
TMC1-201ENST00000297784 PSME1Q06323 249 aa8.71□□□□□ -1.02
TMC1-201ENST00000297784 LTN1O94822 1766 aa8.7□□□□□ -1.02
TMC1-201ENST00000297784 ABTB2Q8N961 1025 aa8.7□□□□□ -1.02
TMC1-201ENST00000297784 PXDNQ92626 1479 aa8.7□□□□□ -1.02
TMC1-201ENST00000297784 PPM1GO15355 546 aaPredicted RBP8.7□□□□□ -1.02
TMC1-201ENST00000297784 CDK12Q9NYV4 1490 aaPredicted RBP8.69□□□□□ -1.02
TMC1-201ENST00000297784 BRINP3Q76B58 766 aa8.69□□□□□ -1.02
TMC1-201ENST00000297784 CCDC146Q8IYE0 955 aa8.69□□□□□ -1.02
TMC1-201ENST00000297784 SLAIN2Q9P270 581 aa8.69□□□□□ -1.02
TMC1-201ENST00000297784 NFAT5O94916 1531 aa8.69□□□□□ -1.02
TMC1-201ENST00000297784 CRYBG1Q9Y4K1 1723 aa8.69□□□□□ -1.02
TMC1-201ENST00000297784 NLRP6P59044 892 aa8.69□□□□□ -1.02
TMC1-201ENST00000297784 RGPD1P0DJD0 1748 aa8.69□□□□□ -1.02
TMC1-201ENST00000297784 WDR43Q15061 677 aaKnown RBP eCLIP8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms