RNA–Protein interactions for RNA: ENST00000297615.9

TTC39B-201, Transcript of tetratricopeptide repeat domain 39B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TTC39B, Length 3,053 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39B-201ENST00000297615 MYOM2P54296 1465 aa17.3■□□□□ 0.36
TTC39B-201ENST00000297615 SLKQ9H2G2 1235 aaPredicted RBP17.3■□□□□ 0.36
TTC39B-201ENST00000297615 MYH16Q9H6N6 1097 aa17.29■□□□□ 0.36
TTC39B-201ENST00000297615 POLR3AO14802 1390 aaPredicted RBP17.29■□□□□ 0.36
TTC39B-201ENST00000297615 ADGRB3O60242 1522 aa17.29■□□□□ 0.36
TTC39B-201ENST00000297615 XPCQ01831 940 aaPredicted RBP17.29■□□□□ 0.36
TTC39B-201ENST00000297615 WASLO00401 505 aaPredicted RBP17.28■□□□□ 0.36
TTC39B-201ENST00000297615 ZMYM3Q14202 1370 aa17.28■□□□□ 0.36
TTC39B-201ENST00000297615 MCM10Q7L590 875 aa17.28■□□□□ 0.36
TTC39B-201ENST00000297615 PDZRN3Q9UPQ7 1066 aa17.28■□□□□ 0.36
TTC39B-201ENST00000297615 TULP4Q9NRJ4 1543 aa17.27■□□□□ 0.36
TTC39B-201ENST00000297615 MYOM1P52179 1685 aa17.27■□□□□ 0.36
TTC39B-201ENST00000297615 TRIM27P14373 513 aa17.27■□□□□ 0.36
TTC39B-201ENST00000297615 COG3Q96JB2 828 aa17.27■□□□□ 0.36
TTC39B-201ENST00000297615 DIP2CQ9Y2E4 1556 aa17.27■□□□□ 0.36
TTC39B-201ENST00000297615 HSP90AB2PQ58FF8 381 aa17.27■□□□□ 0.36
TTC39B-201ENST00000297615 SULT6B1Q6IMI4 303 aa17.27■□□□□ 0.36
TTC39B-201ENST00000297615 TMEM57Q8N5G2 664 aa17.27■□□□□ 0.36
TTC39B-201ENST00000297615 IL27Q8NEV9 243 aa17.27■□□□□ 0.36
TTC39B-201ENST00000297615 DZIP1LQ8IYY4 767 aaKnown RBP17.27■□□□□ 0.35
TTC39B-201ENST00000297615 ADGRB1O14514 1584 aa17.26■□□□□ 0.35
TTC39B-201ENST00000297615 ATAD2Q6PL18 1390 aa17.26■□□□□ 0.35
TTC39B-201ENST00000297615 RIMS2Q9UQ26 1411 aa17.25■□□□□ 0.35
TTC39B-201ENST00000297615 FOXO3O43524 673 aa17.25■□□□□ 0.35
TTC39B-201ENST00000297615 NFKBIBQ15653 356 aa17.25■□□□□ 0.35
TTC39B-201ENST00000297615 ZKSCAN2Q63HK3 967 aa17.25■□□□□ 0.35
TTC39B-201ENST00000297615 NGDNQ8NEJ9 315 aaKnown RBP17.25■□□□□ 0.35
TTC39B-201ENST00000297615 LNPKQ9C0E8 428 aa17.24■□□□□ 0.35
TTC39B-201ENST00000297615 PLEKHF1Q96S99 279 aa17.24■□□□□ 0.35
TTC39B-201ENST00000297615 INSRP06213 1382 aa17.24■□□□□ 0.35
TTC39B-201ENST00000297615 NEO1Q92859 1461 aa17.24■□□□□ 0.35
TTC39B-201ENST00000297615 GLI2P10070 1586 aa17.24■□□□□ 0.35
TTC39B-201ENST00000297615 MYO5BQ9ULV0 1848 aa17.23■□□□□ 0.35
TTC39B-201ENST00000297615 NPC1L1Q9UHC9 1359 aa17.23■□□□□ 0.35
TTC39B-201ENST00000297615 FRAT2O75474 233 aaPredicted RBP17.23■□□□□ 0.35
TTC39B-201ENST00000297615 CCDC61Q9Y6R9 512 aa17.23■□□□□ 0.35
TTC39B-201ENST00000297615 QRICH2Q9H0J4 1663 aa17.23■□□□□ 0.35
TTC39B-201ENST00000297615 PRR36Q9H6K5 1346 aa17.22■□□□□ 0.35
TTC39B-201ENST00000297615 MFAP1P55081 439 aaKnown RBP17.22■□□□□ 0.35
TTC39B-201ENST00000297615 WDR63Q8IWG1 891 aa17.22■□□□□ 0.35
TTC39B-201ENST00000297615 USHBP1Q8N6Y0 703 aa17.22■□□□□ 0.35
TTC39B-201ENST00000297615 CAMSAP1Q5T5Y3 1602 aa17.21■□□□□ 0.35
TTC39B-201ENST00000297615 NEXMIFQ5QGS0 1516 aa17.21■□□□□ 0.35
TTC39B-201ENST00000297615 AMOTL2Q9Y2J4 779 aa17.21■□□□□ 0.35
TTC39B-201ENST00000297615 C8orf58Q8NAV2 365 aa17.2■□□□□ 0.34
TTC39B-201ENST00000297615 ACEP12821 1306 aa17.2■□□□□ 0.34
TTC39B-201ENST00000297615 PDE3AQ14432 1141 aa17.2■□□□□ 0.34
TTC39B-201ENST00000297615 PIK3C2BO00750 1634 aa17.19■□□□□ 0.34
TTC39B-201ENST00000297615 SBNO2Q9Y2G9 1366 aa17.19■□□□□ 0.34
TTC39B-201ENST00000297615 NRXN1Q9ULB1 1477 aa17.19■□□□□ 0.34
TTC39B-201ENST00000297615 PPIP5K1Q6PFW1 1433 aa17.19■□□□□ 0.34
TTC39B-201ENST00000297615 MVPQ14764 893 aaKnown RBP17.18■□□□□ 0.34
TTC39B-201ENST00000297615 SLC4A10Q6U841 1118 aa17.18■□□□□ 0.34
TTC39B-201ENST00000297615 RSPH6AQ9H0K4 717 aa17.17■□□□□ 0.34
TTC39B-201ENST00000297615 FOXD4L1Q9NU39 408 aa17.17■□□□□ 0.34
TTC39B-201ENST00000297615 ABCC11Q96J66 1382 aa17.17■□□□□ 0.34
TTC39B-201ENST00000297615 ATF7IPQ6VMQ6 1270 aa17.17■□□□□ 0.34
TTC39B-201ENST00000297615 MBIPQ9NS73 344 aa17.17■□□□□ 0.34
TTC39B-201ENST00000297615 RIMBP3CA6NJZ7 1639 aa17.16■□□□□ 0.34
TTC39B-201ENST00000297615 RIMBP3BA6NNM3 1639 aa17.16■□□□□ 0.34
TTC39B-201ENST00000297615 RIMBP3Q9UFD9 1639 aa17.16■□□□□ 0.34
TTC39B-201ENST00000297615 LMTK2Q8IWU2 1503 aa17.16■□□□□ 0.34
TTC39B-201ENST00000297615 AMPHP49418 695 aa17.15■□□□□ 0.34
TTC39B-201ENST00000297615 NLRP6P59044 892 aa17.15■□□□□ 0.34
TTC39B-201ENST00000297615 ANKRD45Q5TZF3 282 aa17.15■□□□□ 0.34
TTC39B-201ENST00000297615 PPLO60437 1756 aa17.15■□□□□ 0.34
TTC39B-201ENST00000297615 ROBO2Q9HCK4 1378 aa17.15■□□□□ 0.34
TTC39B-201ENST00000297615 BRPF3Q9ULD4 1205 aa17.15■□□□□ 0.34
TTC39B-201ENST00000297615 EID1Q9Y6B2 187 aa17.15■□□□□ 0.34
TTC39B-201ENST00000297615 RWDD1Q9H446 243 aaPredicted RBP17.15■□□□□ 0.34
TTC39B-201ENST00000297615 PTPRMP28827 1452 aa17.14■□□□□ 0.33
TTC39B-201ENST00000297615 FCHSD2O94868 740 aa17.13■□□□□ 0.33
TTC39B-201ENST00000297615 EIF4A2Q14240 407 aaKnown RBP17.13■□□□□ 0.33
TTC39B-201ENST00000297615 TWISTNBQ3B726 338 aaPredicted RBP17.13■□□□□ 0.33
TTC39B-201ENST00000297615 IL13P35225 146 aa17.12■□□□□ 0.33
TTC39B-201ENST00000297615 UPF2Q9HAU5 1272 aaKnown RBP17.12■□□□□ 0.33
TTC39B-201ENST00000297615 A2ML1A8K2U0 1454 aa17.12■□□□□ 0.33
TTC39B-201ENST00000297615 F6X3S4 739 aa17.12■□□□□ 0.33
TTC39B-201ENST00000297615 NFE2L2Q16236 605 aa17.12■□□□□ 0.33
TTC39B-201ENST00000297615 TNRQ92752 1358 aa17.11■□□□□ 0.33
TTC39B-201ENST00000297615 ALKQ9UM73 1620 aa17.11■□□□□ 0.33
TTC39B-201ENST00000297615 KCNA6P17658 529 aa17.11■□□□□ 0.33
TTC39B-201ENST00000297615 PHF23Q9BUL5 403 aaPredicted RBP17.1■□□□□ 0.33
TTC39B-201ENST00000297615 CD163L1Q9NR16 1453 aa17.1■□□□□ 0.33
TTC39B-201ENST00000297615 HDGFP51858 240 aaKnown RBP17.1■□□□□ 0.33
TTC39B-201ENST00000297615 GSE1Q14687 1217 aa17.1■□□□□ 0.33
TTC39B-201ENST00000297615 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.1■□□□□ 0.33
TTC39B-201ENST00000297615 CLTCQ00610 1675 aaKnown RBP17.08■□□□□ 0.33
TTC39B-201ENST00000297615 VAMP4O75379 141 aa17.08■□□□□ 0.33
TTC39B-201ENST00000297615 ABTB2Q8N961 1025 aa17.08■□□□□ 0.33
TTC39B-201ENST00000297615 TTC21BQ7Z4L5 1316 aa17.08■□□□□ 0.32
TTC39B-201ENST00000297615 RICTORQ6R327 1708 aa17.08■□□□□ 0.32
TTC39B-201ENST00000297615 C16orf71Q8IYS4 520 aaPredicted RBP17.08■□□□□ 0.32
TTC39B-201ENST00000297615 NGEFQ8N5V2 710 aa17.07■□□□□ 0.32
TTC39B-201ENST00000297615 USP35Q9P2H5 1018 aa17.07■□□□□ 0.32
TTC39B-201ENST00000297615 USP19O94966 1318 aa17.07■□□□□ 0.32
TTC39B-201ENST00000297615 SMARCA5O60264 1052 aaPredicted RBP17.07■□□□□ 0.32
TTC39B-201ENST00000297615 ARHGAP31Q2M1Z3 1444 aa17.06■□□□□ 0.32
TTC39B-201ENST00000297615 IFT172Q9UG01 1749 aa17.06■□□□□ 0.32
TTC39B-201ENST00000297615 GZF1Q9H116 711 aaPredicted RBP17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms