RNA–Protein interactions for RNA: ENST00000296875.3

GDF9-201, Transcript of growth differentiation factor 9, humanhuman

TSL 5 BASIC

Gene GDF9, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDF9-201ENST00000296875 XRN1Q8IZH2 1706 aaKnown RBP18.89■□□□□ 0.61
GDF9-201ENST00000296875 ATP7BP35670 1465 aa18.88■□□□□ 0.61
GDF9-201ENST00000296875 CHD2O14647 1828 aaKnown RBP18.88■□□□□ 0.61
GDF9-201ENST00000296875 TNNT2P45379 298 aaPredicted RBP18.88■□□□□ 0.61
GDF9-201ENST00000296875 CT47B1P0C2W7 299 aaPredicted RBP18.87■□□□□ 0.61
GDF9-201ENST00000296875 SIRT1Q96EB6 747 aa18.87■□□□□ 0.61
GDF9-201ENST00000296875 NPHP4O75161 1426 aaPredicted RBP18.87■□□□□ 0.61
GDF9-201ENST00000296875 FAM135BQ49AJ0 1406 aa18.87■□□□□ 0.61
GDF9-201ENST00000296875 MINK1Q8N4C8 1332 aaPredicted RBP18.86■□□□□ 0.61
GDF9-201ENST00000296875 NCKAP5LQ9HCH0 1330 aa18.86■□□□□ 0.61
GDF9-201ENST00000296875 SAFB2Q14151 953 aaKnown RBP eCLIP18.86■□□□□ 0.61
GDF9-201ENST00000296875 TCP11L2Q8N4U5 519 aa18.86■□□□□ 0.61
GDF9-201ENST00000296875 PHF23Q9BUL5 403 aaPredicted RBP18.86■□□□□ 0.61
GDF9-201ENST00000296875 PIK3R4Q99570 1358 aa18.85■□□□□ 0.61
GDF9-201ENST00000296875 ROBO2Q9HCK4 1378 aa18.85■□□□□ 0.61
GDF9-201ENST00000296875 CANXP27824 592 aaKnown RBP18.85■□□□□ 0.61
GDF9-201ENST00000296875 WAPLQ7Z5K2 1190 aa18.85■□□□□ 0.61
GDF9-201ENST00000296875 STRCQ7RTU9 1775 aa18.84■□□□□ 0.61
GDF9-201ENST00000296875 U2AF1L5P0DN76 240 aaPredicted RBP18.84■□□□□ 0.61
GDF9-201ENST00000296875 U2AF1Q01081 240 aaKnown RBP eCLIP18.84■□□□□ 0.61
GDF9-201ENST00000296875 CDK19Q9BWU1 502 aa18.84■□□□□ 0.61
GDF9-201ENST00000296875 ADGRB2O60241 1585 aa18.83■□□□□ 0.61
GDF9-201ENST00000296875 MAPK8IP3Q9UPT6 1336 aa18.83■□□□□ 0.6
GDF9-201ENST00000296875 KIF20BQ96Q89 1820 aa18.82■□□□□ 0.6
GDF9-201ENST00000296875 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.82■□□□□ 0.6
GDF9-201ENST00000296875 NEFMP07197 916 aa18.82■□□□□ 0.6
GDF9-201ENST00000296875 IPO9Q96P70 1041 aaKnown RBP18.82■□□□□ 0.6
GDF9-201ENST00000296875 NOP58Q9Y2X3 529 aaKnown RBP18.82■□□□□ 0.6
GDF9-201ENST00000296875 KDM2BQ8NHM5 1336 aa18.81■□□□□ 0.6
GDF9-201ENST00000296875 MSH5O43196 834 aa18.81■□□□□ 0.6
GDF9-201ENST00000296875 PTCH1Q13635 1447 aa18.81■□□□□ 0.6
GDF9-201ENST00000296875 FBXO41Q8TF61 875 aa18.81■□□□□ 0.6
GDF9-201ENST00000296875 AMOTL2Q9Y2J4 779 aa18.81■□□□□ 0.6
GDF9-201ENST00000296875 CD163L1Q9NR16 1453 aa18.8■□□□□ 0.6
GDF9-201ENST00000296875 PDE4AP27815 886 aa18.8■□□□□ 0.6
GDF9-201ENST00000296875 FYB1O15117 783 aa18.79■□□□□ 0.6
GDF9-201ENST00000296875 C20orf194Q5TEA3 1177 aa18.79■□□□□ 0.6
GDF9-201ENST00000296875 BACH2Q9BYV9 841 aa18.79■□□□□ 0.6
GDF9-201ENST00000296875 IL16Q14005 1332 aa18.79■□□□□ 0.6
GDF9-201ENST00000296875 SPINK5Q9NQ38 1064 aaPredicted RBP18.78■□□□□ 0.6
GDF9-201ENST00000296875 NWD1Q149M9 1564 aa18.77■□□□□ 0.6
GDF9-201ENST00000296875 DIAPH1O60610 1272 aaKnown RBP18.77■□□□□ 0.6
GDF9-201ENST00000296875 GGNBP2Q9H3C7 697 aa18.77■□□□□ 0.6
GDF9-201ENST00000296875 ZBTB47Q9UFB7 747 aaPredicted RBP18.77■□□□□ 0.6
GDF9-201ENST00000296875 EDC4Q6P2E9 1401 aaKnown RBP18.77■□□□□ 0.59
GDF9-201ENST00000296875 COL3A1P02461 1466 aaPredicted RBP18.76■□□□□ 0.59
GDF9-201ENST00000296875 PNPLA6Q8IY17 1366 aa18.76■□□□□ 0.59
GDF9-201ENST00000296875 KCNA6P17658 529 aa18.76■□□□□ 0.59
GDF9-201ENST00000296875 NEUROD2Q15784 382 aa18.76■□□□□ 0.59
GDF9-201ENST00000296875 CABP1Q9NZU7 370 aa18.76■□□□□ 0.59
GDF9-201ENST00000296875 DDRGK1Q96HY6 314 aa18.76■□□□□ 0.59
GDF9-201ENST00000296875 DMRT2Q9Y5R5 561 aa18.76■□□□□ 0.59
GDF9-201ENST00000296875 CDC42BPGQ6DT37 1551 aa18.75■□□□□ 0.59
GDF9-201ENST00000296875 U2SURPO15042 1029 aaKnown RBP18.75■□□□□ 0.59
GDF9-201ENST00000296875 WASLO00401 505 aaPredicted RBP18.74■□□□□ 0.59
GDF9-201ENST00000296875 BCAR3O75815 825 aa18.74■□□□□ 0.59
GDF9-201ENST00000296875 RARSP54136 660 aaKnown RBP18.74■□□□□ 0.59
GDF9-201ENST00000296875 STRCP1A6NGW2 1772 aa18.73■□□□□ 0.59
GDF9-201ENST00000296875 CALD1Q05682 793 aaKnown RBP18.73■□□□□ 0.59
GDF9-201ENST00000296875 PMFBP1Q8TBY8 1022 aa18.73■□□□□ 0.59
GDF9-201ENST00000296875 FCHSD2O94868 740 aa18.73■□□□□ 0.59
GDF9-201ENST00000296875 CERKQ8TCT0 537 aa18.73■□□□□ 0.59
GDF9-201ENST00000296875 RRP7AQ9Y3A4 280 aaKnown RBP18.73■□□□□ 0.59
GDF9-201ENST00000296875 CLUAP1Q96AJ1 413 aa18.72■□□□□ 0.59
GDF9-201ENST00000296875 ZNF692Q9BU19 519 aaPredicted RBP18.72■□□□□ 0.59
GDF9-201ENST00000296875 PLEKHF1Q96S99 279 aa18.71■□□□□ 0.59
GDF9-201ENST00000296875 CPSF1Q10570 1443 aaKnown RBP18.71■□□□□ 0.59
GDF9-201ENST00000296875 TMPOP42166 694 aaKnown RBP18.7■□□□□ 0.58
GDF9-201ENST00000296875 PPIP5K1Q6PFW1 1433 aa18.7■□□□□ 0.58
GDF9-201ENST00000296875 AATKQ6ZMQ8 1374 aa18.7■□□□□ 0.58
GDF9-201ENST00000296875 NALCNQ8IZF0 1738 aa18.69■□□□□ 0.58
GDF9-201ENST00000296875 FAM161AQ3B820 660 aa18.69■□□□□ 0.58
GDF9-201ENST00000296875 ZNF428Q96B54 188 aa18.69■□□□□ 0.58
GDF9-201ENST00000296875 CCDC61Q9Y6R9 512 aa18.69■□□□□ 0.58
GDF9-201ENST00000296875 FRAT1Q92837 279 aaPredicted RBP18.68■□□□□ 0.58
GDF9-201ENST00000296875 CDK12Q9NYV4 1490 aaPredicted RBP18.67■□□□□ 0.58
GDF9-201ENST00000296875 ZKSCAN2Q63HK3 967 aa18.66■□□□□ 0.58
GDF9-201ENST00000296875 LMOD3Q0VAK6 560 aa18.65■□□□□ 0.58
GDF9-201ENST00000296875 COG3Q96JB2 828 aa18.65■□□□□ 0.58
GDF9-201ENST00000296875 ITSN1Q15811 1721 aa18.65■□□□□ 0.58
GDF9-201ENST00000296875 TOPAZ1Q8N9V7 1692 aa18.65■□□□□ 0.58
GDF9-201ENST00000296875 PRR36Q9H6K5 1346 aa18.65■□□□□ 0.58
GDF9-201ENST00000296875 NUDT16Q96DE0 195 aaKnown RBP18.65■□□□□ 0.58
GDF9-201ENST00000296875 MON2Q7Z3U7 1717 aa18.65■□□□□ 0.58
GDF9-201ENST00000296875 RGPD8O14715 1765 aaPredicted RBP18.64■□□□□ 0.57
GDF9-201ENST00000296875 IPO8O15397 1037 aaKnown RBP18.64■□□□□ 0.57
GDF9-201ENST00000296875 RIPK4P57078 832 aa18.64■□□□□ 0.57
GDF9-201ENST00000296875 FTSJ3Q8IY81 847 aaKnown RBP18.64■□□□□ 0.57
GDF9-201ENST00000296875 CHMP4BQ9H444 224 aaKnown RBP18.64■□□□□ 0.57
GDF9-201ENST00000296875 FMN2Q9NZ56 1722 aa18.64■□□□□ 0.57
GDF9-201ENST00000296875 KIF16BQ96L93 1317 aa18.63■□□□□ 0.57
GDF9-201ENST00000296875 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.63■□□□□ 0.57
GDF9-201ENST00000296875 RWDD1Q9H446 243 aaPredicted RBP18.63■□□□□ 0.57
GDF9-201ENST00000296875 LTBP4Q8N2S1 1624 aa18.63■□□□□ 0.57
GDF9-201ENST00000296875 POLKQ9UBT6 870 aa18.63■□□□□ 0.57
GDF9-201ENST00000296875 COG6Q9Y2V7 657 aa18.63■□□□□ 0.57
GDF9-201ENST00000296875 AKAP12Q02952 1782 aa18.62■□□□□ 0.57
GDF9-201ENST00000296875 ADGRL3Q9HAR2 1447 aa18.61■□□□□ 0.57
GDF9-201ENST00000296875 ALDH1L2Q3SY69 923 aa18.61■□□□□ 0.57
GDF9-201ENST00000296875 NPM2Q86SE8 214 aaKnown RBP18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms