RNA–Protein interactions for RNA: ENST00000296794.10

ARHGEF28-201, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 5 BASIC

Gene ARHGEF28, Length 5,246 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-201ENST00000296794 SASS6Q6UVJ0 657 aa19.38■□□□□ 0.69
ARHGEF28-201ENST00000296794 MBD3O95983 291 aa19.37■□□□□ 0.69
ARHGEF28-201ENST00000296794 TPD52L1Q16890 204 aaPredicted RBP19.37■□□□□ 0.69
ARHGEF28-201ENST00000296794 RBM33Q96EV2 1170 aaKnown RBP19.37■□□□□ 0.69
ARHGEF28-201ENST00000296794 AIMP1Q12904 312 aaKnown RBP19.37■□□□□ 0.69
ARHGEF28-201ENST00000296794 SKAP1Q86WV1 359 aa19.37■□□□□ 0.69
ARHGEF28-201ENST00000296794 CPLX1O14810 134 aa19.37■□□□□ 0.69
ARHGEF28-201ENST00000296794 RPGRIP1LQ68CZ1 1315 aa19.36■□□□□ 0.69
ARHGEF28-201ENST00000296794 PES1O00541 588 aaKnown RBP19.36■□□□□ 0.69
ARHGEF28-201ENST00000296794 MAP3K1Q13233 1512 aa19.36■□□□□ 0.69
ARHGEF28-201ENST00000296794 GNAI3P08754 354 aa19.36■□□□□ 0.69
ARHGEF28-201ENST00000296794 C20orf194Q5TEA3 1177 aa19.36■□□□□ 0.69
ARHGEF28-201ENST00000296794 ANO8Q9HCE9 1232 aaPredicted RBP19.36■□□□□ 0.69
ARHGEF28-201ENST00000296794 TATP17735 454 aaPredicted RBP19.35■□□□□ 0.69
ARHGEF28-201ENST00000296794 NCOA1Q15788 1441 aa19.35■□□□□ 0.69
ARHGEF28-201ENST00000296794 CDK19Q9BWU1 502 aa19.35■□□□□ 0.69
ARHGEF28-201ENST00000296794 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.35■□□□□ 0.69
ARHGEF28-201ENST00000296794 APPP05067 770 aa19.35■□□□□ 0.69
ARHGEF28-201ENST00000296794 WWC1Q8IX03 1113 aa19.35■□□□□ 0.69
ARHGEF28-201ENST00000296794 CCDC173Q0VFZ6 552 aa19.34■□□□□ 0.69
ARHGEF28-201ENST00000296794 IFT57Q9NWB7 429 aa19.34■□□□□ 0.69
ARHGEF28-201ENST00000296794 K7ELQ4 463 aaPredicted RBP19.34■□□□□ 0.69
ARHGEF28-201ENST00000296794 MCM2P49736 904 aa19.34■□□□□ 0.69
ARHGEF28-201ENST00000296794 ZNF771Q7L3S4 317 aaPredicted RBP19.34■□□□□ 0.69
ARHGEF28-201ENST00000296794 CABP1Q9NZU7 370 aa19.34■□□□□ 0.69
ARHGEF28-201ENST00000296794 MCM4P33991 863 aa19.33■□□□□ 0.69
ARHGEF28-201ENST00000296794 FBXW7Q969H0 707 aa19.33■□□□□ 0.69
ARHGEF28-201ENST00000296794 SURF6O75683 361 aaKnown RBP19.33■□□□□ 0.68
ARHGEF28-201ENST00000296794 TRIM29Q14134 588 aa19.33■□□□□ 0.68
ARHGEF28-201ENST00000296794 CCDC73Q6ZRK6 1079 aa19.33■□□□□ 0.68
ARHGEF28-201ENST00000296794 CHD1LQ86WJ1 897 aa19.33■□□□□ 0.68
ARHGEF28-201ENST00000296794 CNTROBQ8N137 903 aa19.33■□□□□ 0.68
ARHGEF28-201ENST00000296794 FOSBP53539 338 aa19.33■□□□□ 0.68
ARHGEF28-201ENST00000296794 GRPEL1Q9HAV7 217 aa19.32■□□□□ 0.68
ARHGEF28-201ENST00000296794 CTDP1Q9Y5B0 961 aaPredicted RBP19.32■□□□□ 0.68
ARHGEF28-201ENST00000296794 HOMER1Q86YM7 354 aa19.32■□□□□ 0.68
ARHGEF28-201ENST00000296794 NUTM2BA6NNL0 878 aaPredicted RBP19.32■□□□□ 0.68
ARHGEF28-201ENST00000296794 NUTM2EB1AL46 878 aaPredicted RBP19.32■□□□□ 0.68
ARHGEF28-201ENST00000296794 CCDC27Q2M243 656 aa19.32■□□□□ 0.68
ARHGEF28-201ENST00000296794 NUTM2AQ8IVF1 878 aaPredicted RBP19.32■□□□□ 0.68
ARHGEF28-201ENST00000296794 TPM1P09493 284 aa19.31■□□□□ 0.68
ARHGEF28-201ENST00000296794 TOM1L2Q6ZVM7 507 aa19.31■□□□□ 0.68
ARHGEF28-201ENST00000296794 PRDM11Q9NQV5 511 aa19.31■□□□□ 0.68
ARHGEF28-201ENST00000296794 CD109Q6YHK3 1445 aa19.31■□□□□ 0.68
ARHGEF28-201ENST00000296794 PTPN23Q9H3S7 1636 aa19.31■□□□□ 0.68
ARHGEF28-201ENST00000296794 RAD21O60216 631 aa19.31■□□□□ 0.68
ARHGEF28-201ENST00000296794 TSR1Q2NL82 804 aaKnown RBP19.31■□□□□ 0.68
ARHGEF28-201ENST00000296794 CCDC30Q5VVM6 783 aa19.31■□□□□ 0.68
ARHGEF28-201ENST00000296794 TSPY26PQ9H489 355 aa19.31■□□□□ 0.68
ARHGEF28-201ENST00000296794 TRDNQ13061 729 aa19.3■□□□□ 0.68
ARHGEF28-201ENST00000296794 RBM42Q9BTD8 480 aaKnown RBP19.3■□□□□ 0.68
ARHGEF28-201ENST00000296794 A0A0U1RQG5 324 aaPredicted RBP19.3■□□□□ 0.68
ARHGEF28-201ENST00000296794 SF3B2Q13435 895 aaKnown RBP19.3■□□□□ 0.68
ARHGEF28-201ENST00000296794 CLASRPQ8N2M8 674 aaKnown RBP19.3■□□□□ 0.68
ARHGEF28-201ENST00000296794 LAMC3Q9Y6N6 1575 aa19.3■□□□□ 0.68
ARHGEF28-201ENST00000296794 TPM2P07951 284 aa19.29■□□□□ 0.68
ARHGEF28-201ENST00000296794 RTEL1-TNFRSF6BF6WH68 1400 aa19.29■□□□□ 0.68
ARHGEF28-201ENST00000296794 CWC22Q9HCG8 908 aaKnown RBP19.29■□□□□ 0.68
ARHGEF28-201ENST00000296794 ABCC5O15440 1437 aa19.29■□□□□ 0.68
ARHGEF28-201ENST00000296794 GNAI2P04899 355 aa19.29■□□□□ 0.68
ARHGEF28-201ENST00000296794 SLC4A2P04920 1241 aa19.28■□□□□ 0.68
ARHGEF28-201ENST00000296794 PSMA5P28066 241 aa19.28■□□□□ 0.68
ARHGEF28-201ENST00000296794 ABCA10Q8WWZ4 1543 aa19.28■□□□□ 0.68
ARHGEF28-201ENST00000296794 DCAF8L1A6NGE4 600 aa19.28■□□□□ 0.68
ARHGEF28-201ENST00000296794 NEUROD6Q96NK8 337 aa19.28■□□□□ 0.68
ARHGEF28-201ENST00000296794 LETM1O95202 739 aaPredicted RBP19.27■□□□□ 0.68
ARHGEF28-201ENST00000296794 CIZ1Q9ULV3 898 aaPredicted RBP19.27■□□□□ 0.68
ARHGEF28-201ENST00000296794 FSD1Q9BTV5 496 aa19.27■□□□□ 0.68
ARHGEF28-201ENST00000296794 GPS2Q13227 327 aa19.26■□□□□ 0.67
ARHGEF28-201ENST00000296794 MAP7D2Q96T17 732 aa19.26■□□□□ 0.67
ARHGEF28-201ENST00000296794 FIBPO43427 364 aa19.26■□□□□ 0.67
ARHGEF28-201ENST00000296794 NSD3Q9BZ95 1437 aa19.25■□□□□ 0.67
ARHGEF28-201ENST00000296794 SULT6B1Q6IMI4 303 aa19.25■□□□□ 0.67
ARHGEF28-201ENST00000296794 TMEM57Q8N5G2 664 aa19.25■□□□□ 0.67
ARHGEF28-201ENST00000296794 DHX16O60231 1041 aaKnown RBP19.25■□□□□ 0.67
ARHGEF28-201ENST00000296794 PIP4K2BP78356 416 aa19.25■□□□□ 0.67
ARHGEF28-201ENST00000296794 MTERF4Q7Z6M4 381 aaKnown RBP19.24■□□□□ 0.67
ARHGEF28-201ENST00000296794 DDX54Q8TDD1 881 aaKnown RBP19.24■□□□□ 0.67
ARHGEF28-201ENST00000296794 HOOK1Q9UJC3 728 aaKnown RBP19.24■□□□□ 0.67
ARHGEF28-201ENST00000296794 RPRD2Q5VT52 1461 aaKnown RBP19.24■□□□□ 0.67
ARHGEF28-201ENST00000296794 KIF6Q6ZMV9 814 aa19.24■□□□□ 0.67
ARHGEF28-201ENST00000296794 NFXL1Q6ZNB6 911 aa19.24■□□□□ 0.67
ARHGEF28-201ENST00000296794 CCDC61Q9Y6R9 512 aa19.24■□□□□ 0.67
ARHGEF28-201ENST00000296794 RARSP54136 660 aaKnown RBP19.23■□□□□ 0.67
ARHGEF28-201ENST00000296794 ZNF530Q6P9A1 599 aaPredicted RBP19.23■□□□□ 0.67
ARHGEF28-201ENST00000296794 CAMSAP2Q08AD1 1489 aa19.23■□□□□ 0.67
ARHGEF28-201ENST00000296794 SPG7Q9UQ90 795 aa19.23■□□□□ 0.67
ARHGEF28-201ENST00000296794 TMPOP42166 694 aaKnown RBP19.23■□□□□ 0.67
ARHGEF28-201ENST00000296794 TRIM5Q9C035 493 aa19.23■□□□□ 0.67
ARHGEF28-201ENST00000296794 ATAD2Q6PL18 1390 aa19.23■□□□□ 0.67
ARHGEF28-201ENST00000296794 CCT4P50991 539 aaKnown RBP19.23■□□□□ 0.67
ARHGEF28-201ENST00000296794 LRRCC1Q9C099 1032 aa19.22■□□□□ 0.67
ARHGEF28-201ENST00000296794 TCEAL9Q9UHQ7 104 aa19.22■□□□□ 0.67
ARHGEF28-201ENST00000296794 NKTRP30414 1462 aaKnown RBP19.22■□□□□ 0.67
ARHGEF28-201ENST00000296794 FAM177BA6PVY3 158 aa19.22■□□□□ 0.67
ARHGEF28-201ENST00000296794 SDF4Q9BRK5 362 aa19.22■□□□□ 0.67
ARHGEF28-201ENST00000296794 CABP4P57796 275 aa19.22■□□□□ 0.67
ARHGEF28-201ENST00000296794 PDCP20941 246 aa19.22■□□□□ 0.67
ARHGEF28-201ENST00000296794 RALYLQ86SE5 291 aaKnown RBP19.22■□□□□ 0.67
ARHGEF28-201ENST00000296794 ESPNB1AK53 854 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms