RNA–Protein interactions for RNA: ENST00000295984.7

PRRT3-201, Transcript of proline rich transmembrane protein 3, humanhuman

TSL 1 (best)

Gene PRRT3, Length 3,368 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRRT3-201ENST00000295984 PRDM15P57071 1507 aaPredicted RBP18.94■□□□□ 0.62
PRRT3-201ENST00000295984 PPP1R9BQ96SB3 815 aa18.94■□□□□ 0.62
PRRT3-201ENST00000295984 RBM25P49756 843 aaKnown RBP18.93■□□□□ 0.62
PRRT3-201ENST00000295984 GGNBP2Q9H3C7 697 aa18.93■□□□□ 0.62
PRRT3-201ENST00000295984 NINLQ9Y2I6 1382 aa18.93■□□□□ 0.62
PRRT3-201ENST00000295984 ZGPATQ8N5A5 531 aaKnown RBP18.93■□□□□ 0.62
PRRT3-201ENST00000295984 BCL11BQ9C0K0 894 aaPredicted RBP18.93■□□□□ 0.62
PRRT3-201ENST00000295984 IGSF3O75054 1194 aa18.92■□□□□ 0.62
PRRT3-201ENST00000295984 WDR63Q8IWG1 891 aa18.92■□□□□ 0.62
PRRT3-201ENST00000295984 CFAP53Q96M91 514 aa18.92■□□□□ 0.62
PRRT3-201ENST00000295984 ABCA8O94911 1581 aa18.92■□□□□ 0.62
PRRT3-201ENST00000295984 NUTM2FA1L443 756 aa18.92■□□□□ 0.62
PRRT3-201ENST00000295984 PLCB2Q00722 1185 aa18.92■□□□□ 0.62
PRRT3-201ENST00000295984 SAMD9LQ8IVG5 1584 aa18.92■□□□□ 0.62
PRRT3-201ENST00000295984 KLHL40Q2TBA0 621 aa18.92■□□□□ 0.62
PRRT3-201ENST00000295984 SNX21Q969T3 373 aa18.92■□□□□ 0.62
PRRT3-201ENST00000295984 C17orf53Q8N3J3 647 aaPredicted RBP18.91■□□□□ 0.62
PRRT3-201ENST00000295984 NSFL1CQ9UNZ2 370 aaKnown RBP18.91■□□□□ 0.62
PRRT3-201ENST00000295984 CBX1P83916 185 aa18.9■□□□□ 0.62
PRRT3-201ENST00000295984 CFAP65Q6ZU64 1925 aaKnown RBP18.9■□□□□ 0.62
PRRT3-201ENST00000295984 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.9■□□□□ 0.62
PRRT3-201ENST00000295984 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.9■□□□□ 0.62
PRRT3-201ENST00000295984 CIZ1Q9ULV3 898 aaPredicted RBP18.9■□□□□ 0.62
PRRT3-201ENST00000295984 NUCB1Q02818 461 aa18.9■□□□□ 0.62
PRRT3-201ENST00000295984 ADCY10Q96PN6 1610 aa18.89■□□□□ 0.62
PRRT3-201ENST00000295984 HDAC1Q13547 482 aaPredicted RBP18.89■□□□□ 0.61
PRRT3-201ENST00000295984 MINK1Q8N4C8 1332 aaPredicted RBP18.89■□□□□ 0.61
PRRT3-201ENST00000295984 VIRMAQ69YN4 1812 aaKnown RBP18.89■□□□□ 0.61
PRRT3-201ENST00000295984 THUMPD2Q9BTF0 503 aaKnown RBP18.89■□□□□ 0.61
PRRT3-201ENST00000295984 NSD3Q9BZ95 1437 aa18.88■□□□□ 0.61
PRRT3-201ENST00000295984 TTC37Q6PGP7 1564 aa18.88■□□□□ 0.61
PRRT3-201ENST00000295984 ZBTB40Q9NUA8 1239 aa18.88■□□□□ 0.61
PRRT3-201ENST00000295984 C16orf71Q8IYS4 520 aaPredicted RBP18.88■□□□□ 0.61
PRRT3-201ENST00000295984 SLC24A1O60721 1099 aa18.87■□□□□ 0.61
PRRT3-201ENST00000295984 KANK1Q14678 1352 aa18.87■□□□□ 0.61
PRRT3-201ENST00000295984 NOL7Q9UMY1 257 aaKnown RBP18.86■□□□□ 0.61
PRRT3-201ENST00000295984 ATAD2Q6PL18 1390 aa18.86■□□□□ 0.61
PRRT3-201ENST00000295984 AAMPQ13685 434 aa18.85■□□□□ 0.61
PRRT3-201ENST00000295984 OSCARQ8IYS5 282 aa18.85■□□□□ 0.61
PRRT3-201ENST00000295984 GDPD2Q9HCC8 539 aa18.85■□□□□ 0.61
PRRT3-201ENST00000295984 LMBRD1Q9NUN5 540 aa18.85■□□□□ 0.61
PRRT3-201ENST00000295984 NGEFQ8N5V2 710 aa18.85■□□□□ 0.61
PRRT3-201ENST00000295984 GPT2Q8TD30 523 aa18.85■□□□□ 0.61
PRRT3-201ENST00000295984 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.84■□□□□ 0.61
PRRT3-201ENST00000295984 DTNBO60941 627 aa18.84■□□□□ 0.61
PRRT3-201ENST00000295984 ABCC2Q92887 1545 aa18.84■□□□□ 0.61
PRRT3-201ENST00000295984 SPDYE4A6NLX3 237 aa18.84■□□□□ 0.61
PRRT3-201ENST00000295984 TMEM63CQ9P1W3 806 aa18.84■□□□□ 0.61
PRRT3-201ENST00000295984 KIF16BQ96L93 1317 aa18.83■□□□□ 0.61
PRRT3-201ENST00000295984 ZKSCAN5Q9Y2L8 839 aa18.83■□□□□ 0.61
PRRT3-201ENST00000295984 SCAF11Q99590 1463 aaKnown RBP18.83■□□□□ 0.6
PRRT3-201ENST00000295984 TMPOP42166 694 aaKnown RBP18.82■□□□□ 0.6
PRRT3-201ENST00000295984 BMP2KLQ5H9B9 411 aa18.82■□□□□ 0.6
PRRT3-201ENST00000295984 CROCC2H7BZ55 1655 aa18.82■□□□□ 0.6
PRRT3-201ENST00000295984 OTUD7AQ8TE49 926 aaPredicted RBP18.81■□□□□ 0.6
PRRT3-201ENST00000295984 POLR3AO14802 1390 aaPredicted RBP18.81■□□□□ 0.6
PRRT3-201ENST00000295984 CDC42BPBQ9Y5S2 1711 aa18.8■□□□□ 0.6
PRRT3-201ENST00000295984 IPO8O15397 1037 aaKnown RBP18.8■□□□□ 0.6
PRRT3-201ENST00000295984 NCOA3Q9Y6Q9 1424 aa18.8■□□□□ 0.6
PRRT3-201ENST00000295984 SMARCA5O60264 1052 aaPredicted RBP18.79■□□□□ 0.6
PRRT3-201ENST00000295984 PTMSP20962 102 aa18.79■□□□□ 0.6
PRRT3-201ENST00000295984 TRIM35Q9UPQ4 493 aa18.79■□□□□ 0.6
PRRT3-201ENST00000295984 SHANK2Q9UPX8 1470 aa18.79■□□□□ 0.6
PRRT3-201ENST00000295984 HMOX1P09601 288 aa18.79■□□□□ 0.6
PRRT3-201ENST00000295984 CLASP1Q7Z460 1538 aa18.79■□□□□ 0.6
PRRT3-201ENST00000295984 TTC12Q9H892 705 aaPredicted RBP18.78■□□□□ 0.6
PRRT3-201ENST00000295984 ZNF445P59923 1031 aa18.78■□□□□ 0.6
PRRT3-201ENST00000295984 MAP7D2Q96T17 732 aa18.78■□□□□ 0.6
PRRT3-201ENST00000295984 PHF23Q9BUL5 403 aaPredicted RBP18.78■□□□□ 0.6
PRRT3-201ENST00000295984 UGGT1Q9NYU2 1555 aa18.77■□□□□ 0.6
PRRT3-201ENST00000295984 CDC45O75419 566 aa18.77■□□□□ 0.6
PRRT3-201ENST00000295984 GSPT1P15170 499 aaKnown RBP18.77■□□□□ 0.6
PRRT3-201ENST00000295984 TSPYL6Q8N831 410 aa18.77■□□□□ 0.6
PRRT3-201ENST00000295984 ZNF500O60304 480 aaPredicted RBP18.76■□□□□ 0.59
PRRT3-201ENST00000295984 NUCB2P80303 420 aa18.76■□□□□ 0.59
PRRT3-201ENST00000295984 SASS6Q6UVJ0 657 aa18.76■□□□□ 0.59
PRRT3-201ENST00000295984 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.76■□□□□ 0.59
PRRT3-201ENST00000295984 SIRT2Q8IXJ6 389 aa18.76■□□□□ 0.59
PRRT3-201ENST00000295984 PLCH2O75038 1416 aa18.76■□□□□ 0.59
PRRT3-201ENST00000295984 CHD1O14646 1710 aa18.76■□□□□ 0.59
PRRT3-201ENST00000295984 DYNC1I1O14576 645 aa18.75■□□□□ 0.59
PRRT3-201ENST00000295984 MAPK8IP2Q13387 824 aaPredicted RBP18.74■□□□□ 0.59
PRRT3-201ENST00000295984 CCDC39Q9UFE4 941 aa18.74■□□□□ 0.59
PRRT3-201ENST00000295984 ZDHHC9Q9Y397 364 aa18.74■□□□□ 0.59
PRRT3-201ENST00000295984 NPC1L1Q9UHC9 1359 aa18.74■□□□□ 0.59
PRRT3-201ENST00000295984 TSHZ3Q63HK5 1081 aa18.74■□□□□ 0.59
PRRT3-201ENST00000295984 USP25Q9UHP3 1055 aa18.74■□□□□ 0.59
PRRT3-201ENST00000295984 CSPP1Q1MSJ5 1256 aa18.73■□□□□ 0.59
PRRT3-201ENST00000295984 PPP4R3BQ5MIZ7 849 aa18.73■□□□□ 0.59
PRRT3-201ENST00000295984 FBXO31Q5XUX0 539 aaPredicted RBP18.73■□□□□ 0.59
PRRT3-201ENST00000295984 FANCAO15360 1455 aa18.72■□□□□ 0.59
PRRT3-201ENST00000295984 LRSAM1Q6UWE0 723 aa18.72■□□□□ 0.59
PRRT3-201ENST00000295984 ZBTB7BO15156 539 aaPredicted RBP18.72■□□□□ 0.59
PRRT3-201ENST00000295984 NEK4P51957 841 aa18.72■□□□□ 0.59
PRRT3-201ENST00000295984 KIAA2012Q0VF49 1180 aa18.72■□□□□ 0.59
PRRT3-201ENST00000295984 PDLIM2Q96JY6 352 aa18.72■□□□□ 0.59
PRRT3-201ENST00000295984 ERVK-7P63135 1459 aa18.72■□□□□ 0.59
PRRT3-201ENST00000295984 MYO5CQ9NQX4 1742 aa18.72■□□□□ 0.59
PRRT3-201ENST00000295984 RABEP1Q15276 862 aa18.72■□□□□ 0.59
PRRT3-201ENST00000295984 SMAP1Q8IYB5 467 aaPredicted RBP18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms