RNA–Protein interactions for RNA: ENST00000295911.6

CLRN1-201, Transcript of clarin 1, humanhuman

TSL 1 (best) BASIC

Gene CLRN1, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-201ENST00000295911 SLC39A7Q92504 469 aa12.26□□□□□ -0.45
CLRN1-201ENST00000295911 SLC12A5Q9H2X9 1139 aa12.26□□□□□ -0.45
CLRN1-201ENST00000295911 TSHZ2Q9NRE2 1034 aa12.26□□□□□ -0.45
CLRN1-201ENST00000295911 SETD1AO15047 1707 aaKnown RBP12.25□□□□□ -0.45
CLRN1-201ENST00000295911 POLR3AO14802 1390 aaPredicted RBP12.25□□□□□ -0.45
CLRN1-201ENST00000295911 CGNL1Q0VF96 1302 aa12.25□□□□□ -0.45
CLRN1-201ENST00000295911 RIMS2Q9UQ26 1411 aa12.25□□□□□ -0.45
CLRN1-201ENST00000295911 ZMYM3Q14202 1370 aa12.25□□□□□ -0.45
CLRN1-201ENST00000295911 ATAD2Q6PL18 1390 aa12.25□□□□□ -0.45
CLRN1-201ENST00000295911 ANKRD26Q9UPS8 1709 aa12.24□□□□□ -0.45
CLRN1-201ENST00000295911 C7P10643 843 aa12.24□□□□□ -0.45
CLRN1-201ENST00000295911 MORC1Q86VD1 984 aa12.24□□□□□ -0.45
CLRN1-201ENST00000295911 POGKQ9P215 609 aa12.24□□□□□ -0.45
CLRN1-201ENST00000295911 RCAN3Q9UKA8 241 aa12.24□□□□□ -0.45
CLRN1-201ENST00000295911 TTLL13PA6NNM8 815 aa12.23□□□□□ -0.45
CLRN1-201ENST00000295911 PYGBP11216 843 aa12.23□□□□□ -0.45
CLRN1-201ENST00000295911 MLECQ14165 292 aa12.23□□□□□ -0.45
CLRN1-201ENST00000295911 IFNLR1Q8IU57 520 aaPredicted RBP12.23□□□□□ -0.45
CLRN1-201ENST00000295911 STK26Q9P289 416 aa12.23□□□□□ -0.45
CLRN1-201ENST00000295911 SALL2Q9Y467 1007 aaPredicted RBP12.22□□□□□ -0.45
CLRN1-201ENST00000295911 KNDC1Q76NI1 1749 aa12.21□□□□□ -0.45
CLRN1-201ENST00000295911 OTUD5Q96G74 571 aa12.21□□□□□ -0.45
CLRN1-201ENST00000295911 UBR1Q8IWV7 1749 aa12.21□□□□□ -0.46
CLRN1-201ENST00000295911 SHPRHQ149N8 1683 aa12.2□□□□□ -0.46
CLRN1-201ENST00000295911 SENP3-EIF4A1A0A087X0R7 540 aa12.2□□□□□ -0.46
CLRN1-201ENST00000295911 SRPK2P78362 688 aaKnown RBP12.2□□□□□ -0.46
CLRN1-201ENST00000295911 PRAM1Q96QH2 718 aa12.2□□□□□ -0.46
CLRN1-201ENST00000295911 TERF2IPQ9NYB0 399 aa12.2□□□□□ -0.46
CLRN1-201ENST00000295911 TNRQ92752 1358 aa12.2□□□□□ -0.46
CLRN1-201ENST00000295911 ABCC11Q96J66 1382 aa12.2□□□□□ -0.46
CLRN1-201ENST00000295911 KIF20BQ96Q89 1820 aa12.2□□□□□ -0.46
CLRN1-201ENST00000295911 RRP1P56182 461 aaKnown RBP12.2□□□□□ -0.46
CLRN1-201ENST00000295911 CFAP53Q96M91 514 aa12.2□□□□□ -0.46
CLRN1-201ENST00000295911 CABP2Q9NPB3 220 aa12.2□□□□□ -0.46
CLRN1-201ENST00000295911 NRXN3Q9Y4C0 1643 aa12.19□□□□□ -0.46
CLRN1-201ENST00000295911 GOLGA2Q08379 1002 aa12.19□□□□□ -0.46
CLRN1-201ENST00000295911 CDCA7LQ96GN5 454 aa12.19□□□□□ -0.46
CLRN1-201ENST00000295911 ZNF521Q96K83 1311 aa12.18□□□□□ -0.46
CLRN1-201ENST00000295911 MED14O60244 1454 aa12.18□□□□□ -0.46
CLRN1-201ENST00000295911 POTEJP0CG39 1038 aa12.18□□□□□ -0.46
CLRN1-201ENST00000295911 SAFB2Q14151 953 aaKnown RBP eCLIP12.18□□□□□ -0.46
CLRN1-201ENST00000295911 SIRT1Q96EB6 747 aa12.18□□□□□ -0.46
CLRN1-201ENST00000295911 MINK1Q8N4C8 1332 aaPredicted RBP12.17□□□□□ -0.46
CLRN1-201ENST00000295911 POTEFA5A3E0 1075 aa12.17□□□□□ -0.46
CLRN1-201ENST00000295911 B4GALNT3Q6L9W6 998 aa12.17□□□□□ -0.46
CLRN1-201ENST00000295911 HDGFL2Q7Z4V5 671 aaPredicted RBP12.17□□□□□ -0.46
CLRN1-201ENST00000295911 CCDC136Q96JN2 1154 aa12.17□□□□□ -0.46
CLRN1-201ENST00000295911 NLRP1Q9C000 1473 aa12.17□□□□□ -0.46
CLRN1-201ENST00000295911 PLEKHH1Q9ULM0 1364 aa12.16□□□□□ -0.46
CLRN1-201ENST00000295911 CDK19Q9BWU1 502 aa12.16□□□□□ -0.46
CLRN1-201ENST00000295911 A0A1W2PP64 1363 aa12.15□□□□□ -0.46
CLRN1-201ENST00000295911 GSE1Q14687 1217 aa12.15□□□□□ -0.46
CLRN1-201ENST00000295911 FER1L4A9Z1Z3 1794 aa12.15□□□□□ -0.46
CLRN1-201ENST00000295911 FAM135BQ49AJ0 1406 aa12.14□□□□□ -0.47
CLRN1-201ENST00000295911 ATP7BP35670 1465 aa12.14□□□□□ -0.47
CLRN1-201ENST00000295911 APAF1O14727 1248 aa12.14□□□□□ -0.47
CLRN1-201ENST00000295911 MTHFSP49914 203 aa12.14□□□□□ -0.47
CLRN1-201ENST00000295911 SLFN5Q08AF3 891 aa12.14□□□□□ -0.47
CLRN1-201ENST00000295911 TRMT2AQ8IZ69 625 aaKnown RBP12.14□□□□□ -0.47
CLRN1-201ENST00000295911 PCDHB8Q9UN66 801 aa12.14□□□□□ -0.47
CLRN1-201ENST00000295911 TRIM35Q9UPQ4 493 aa12.14□□□□□ -0.47
CLRN1-201ENST00000295911 TMEM2Q9UHN6 1383 aa12.14□□□□□ -0.47
CLRN1-201ENST00000295911 C3P01024 1663 aa12.14□□□□□ -0.47
CLRN1-201ENST00000295911 TECPR2O15040 1411 aa12.14□□□□□ -0.47
CLRN1-201ENST00000295911 CD163L1Q9NR16 1453 aa12.13□□□□□ -0.47
CLRN1-201ENST00000295911 DUSP27Q5VZP5 1158 aa12.13□□□□□ -0.47
CLRN1-201ENST00000295911 CCDC146Q8IYE0 955 aa12.13□□□□□ -0.47
CLRN1-201ENST00000295911 RUNDC1Q96C34 613 aa12.13□□□□□ -0.47
CLRN1-201ENST00000295911 TMEM106CQ9BVX2 250 aa12.13□□□□□ -0.47
CLRN1-201ENST00000295911 CPS1P31327 1500 aa12.13□□□□□ -0.47
CLRN1-201ENST00000295911 E9PSI1 815 aa12.12□□□□□ -0.47
CLRN1-201ENST00000295911 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.12□□□□□ -0.47
CLRN1-201ENST00000295911 SPOCK2Q92563 424 aa12.12□□□□□ -0.47
CLRN1-201ENST00000295911 TNNT2P45379 298 aaPredicted RBP12.11□□□□□ -0.47
CLRN1-201ENST00000295911 ITSN1Q15811 1721 aa12.11□□□□□ -0.47
CLRN1-201ENST00000295911 COLQQ9Y215 455 aaPredicted RBP12.11□□□□□ -0.47
CLRN1-201ENST00000295911 RBM19Q9Y4C8 960 aaKnown RBP12.11□□□□□ -0.47
CLRN1-201ENST00000295911 NKTRP30414 1462 aaKnown RBP12.1□□□□□ -0.47
CLRN1-201ENST00000295911 AKAP12Q02952 1782 aa12.1□□□□□ -0.47
CLRN1-201ENST00000295911 MAP2P11137 1827 aaKnown RBP12.1□□□□□ -0.47
CLRN1-201ENST00000295911 WASLO00401 505 aaPredicted RBP12.1□□□□□ -0.47
CLRN1-201ENST00000295911 FYB1O15117 783 aa12.1□□□□□ -0.47
CLRN1-201ENST00000295911 WAPLQ7Z5K2 1190 aa12.1□□□□□ -0.47
CLRN1-201ENST00000295911 CABP1Q9NZU7 370 aa12.1□□□□□ -0.47
CLRN1-201ENST00000295911 METP08581 1390 aa12.1□□□□□ -0.47
CLRN1-201ENST00000295911 PLEKHG1Q9ULL1 1385 aa12.1□□□□□ -0.47
CLRN1-201ENST00000295911 MON2Q7Z3U7 1717 aa12.09□□□□□ -0.47
CLRN1-201ENST00000295911 CCDC27Q2M243 656 aa12.09□□□□□ -0.47
CLRN1-201ENST00000295911 PNNQ9H307 717 aaKnown RBP12.09□□□□□ -0.47
CLRN1-201ENST00000295911 IQSEC2Q5JU85 1478 aa12.08□□□□□ -0.48
CLRN1-201ENST00000295911 WDR63Q8IWG1 891 aa12.08□□□□□ -0.48
CLRN1-201ENST00000295911 WWC1Q8IX03 1113 aa12.08□□□□□ -0.48
CLRN1-201ENST00000295911 EXOC6Q8TAG9 804 aa12.08□□□□□ -0.48
CLRN1-201ENST00000295911 EID1Q9Y6B2 187 aa12.08□□□□□ -0.48
CLRN1-201ENST00000295911 ADGRB2O60241 1585 aa12.07□□□□□ -0.48
CLRN1-201ENST00000295911 SLIT1O75093 1534 aa12.07□□□□□ -0.48
CLRN1-201ENST00000295911 GGNBP2Q9H3C7 697 aa12.07□□□□□ -0.48
CLRN1-201ENST00000295911 CPSF1Q10570 1443 aaKnown RBP12.06□□□□□ -0.48
CLRN1-201ENST00000295911 EDC4Q6P2E9 1401 aaKnown RBP12.06□□□□□ -0.48
CLRN1-201ENST00000295911 CHRM1P11229 460 aaPredicted RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms