RNA–Protein interactions for RNA: ENST00000295226.1

CCDC140-201, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC140, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-201ENST00000295226 AMER1Q5JTC6 1135 aaPredicted RBP20.73■□□□□ 0.91
CCDC140-201ENST00000295226 NME9Q86XW9 330 aa20.73■□□□□ 0.91
CCDC140-201ENST00000295226 EDC4Q6P2E9 1401 aaKnown RBP20.72■□□□□ 0.91
CCDC140-201ENST00000295226 NPHP3Q7Z494 1330 aa20.72■□□□□ 0.91
CCDC140-201ENST00000295226 NUTM2GQ5VZR2 741 aa20.72■□□□□ 0.91
CCDC140-201ENST00000295226 SSH2Q76I76 1423 aa20.72■□□□□ 0.91
CCDC140-201ENST00000295226 FYB1O15117 783 aa20.71■□□□□ 0.91
CCDC140-201ENST00000295226 GGNBP2Q9H3C7 697 aa20.71■□□□□ 0.91
CCDC140-201ENST00000295226 PLEKHG5O94827 1062 aa20.7■□□□□ 0.91
CCDC140-201ENST00000295226 CGNL1Q0VF96 1302 aa20.7■□□□□ 0.9
CCDC140-201ENST00000295226 LMOD2Q6P5Q4 547 aa20.7■□□□□ 0.9
CCDC140-201ENST00000295226 NRKQ7Z2Y5 1582 aa20.69■□□□□ 0.9
CCDC140-201ENST00000295226 PXDNQ92626 1479 aa20.68■□□□□ 0.9
CCDC140-201ENST00000295226 ABTB2Q8N961 1025 aa20.67■□□□□ 0.9
CCDC140-201ENST00000295226 SOS2Q07890 1332 aaPredicted RBP20.67■□□□□ 0.9
CCDC140-201ENST00000295226 NHSL1Q5SYE7 1610 aa20.66■□□□□ 0.9
CCDC140-201ENST00000295226 TRPM3Q9HCF6 1732 aaPredicted RBP20.65■□□□□ 0.9
CCDC140-201ENST00000295226 TNNT2P45379 298 aaPredicted RBP20.65■□□□□ 0.9
CCDC140-201ENST00000295226 TTC21AQ8NDW8 1320 aa20.65■□□□□ 0.9
CCDC140-201ENST00000295226 NLRP6P59044 892 aa20.64■□□□□ 0.9
CCDC140-201ENST00000295226 FBLN1P23142 703 aa20.64■□□□□ 0.89
CCDC140-201ENST00000295226 ANP32CO43423 234 aa20.63■□□□□ 0.89
CCDC140-201ENST00000295226 MORC1Q86VD1 984 aa20.63■□□□□ 0.89
CCDC140-201ENST00000295226 KIF20BQ96Q89 1820 aa20.63■□□□□ 0.89
CCDC140-201ENST00000295226 PIK3C2AO00443 1686 aa20.63■□□□□ 0.89
CCDC140-201ENST00000295226 SPATA31A3Q5VYP0 1347 aa20.63■□□□□ 0.89
CCDC140-201ENST00000295226 SBNO1A3KN83 1393 aa20.62■□□□□ 0.89
CCDC140-201ENST00000295226 SOX12O15370 315 aa20.62■□□□□ 0.89
CCDC140-201ENST00000295226 COG3Q96JB2 828 aa20.61■□□□□ 0.89
CCDC140-201ENST00000295226 PRKRIP1Q9H875 184 aaPredicted RBP20.61■□□□□ 0.89
CCDC140-201ENST00000295226 AHDC1Q5TGY3 1603 aaPredicted RBP20.61■□□□□ 0.89
CCDC140-201ENST00000295226 BRD4O60885 1362 aaPredicted RBP20.61■□□□□ 0.89
CCDC140-201ENST00000295226 MIER1Q8N108 512 aa20.61■□□□□ 0.89
CCDC140-201ENST00000295226 NPC1L1Q9UHC9 1359 aa20.6■□□□□ 0.89
CCDC140-201ENST00000295226 PHLPP1O60346 1717 aa20.6■□□□□ 0.89
CCDC140-201ENST00000295226 TNS3Q68CZ2 1445 aa20.6■□□□□ 0.89
CCDC140-201ENST00000295226 CABLES1Q8TDN4 633 aa20.59■□□□□ 0.89
CCDC140-201ENST00000295226 ALS2Q96Q42 1657 aa20.59■□□□□ 0.89
CCDC140-201ENST00000295226 NSD2O96028 1365 aa20.58■□□□□ 0.88
CCDC140-201ENST00000295226 LRRC59Q96AG4 307 aaKnown RBP20.58■□□□□ 0.88
CCDC140-201ENST00000295226 OVOS2A0A0J9YW53 1432 aa20.57■□□□□ 0.88
CCDC140-201ENST00000295226 OVOS2Q6IE36 1432 aa20.57■□□□□ 0.88
CCDC140-201ENST00000295226 USP31Q70CQ4 1352 aa20.57■□□□□ 0.88
CCDC140-201ENST00000295226 PARD3Q8TEW0 1356 aa20.57■□□□□ 0.88
CCDC140-201ENST00000295226 HSPA1LP34931 641 aa20.57■□□□□ 0.88
CCDC140-201ENST00000295226 NLRP13Q86W25 1043 aa20.57■□□□□ 0.88
CCDC140-201ENST00000295226 MARF1Q9Y4F3 1742 aaKnown RBP20.56■□□□□ 0.88
CCDC140-201ENST00000295226 COL16A1Q07092 1604 aaPredicted RBP20.56■□□□□ 0.88
CCDC140-201ENST00000295226 RALBP1Q15311 655 aa20.55■□□□□ 0.88
CCDC140-201ENST00000295226 ANKRD26Q9UPS8 1709 aa20.55■□□□□ 0.88
CCDC140-201ENST00000295226 ARHGEF10O15013 1369 aa20.53■□□□□ 0.88
CCDC140-201ENST00000295226 PPP2R1AP30153 589 aa20.53■□□□□ 0.88
CCDC140-201ENST00000295226 RRS1Q15050 365 aaKnown RBP20.52■□□□□ 0.88
CCDC140-201ENST00000295226 MED1Q15648 1581 aaPredicted RBP20.52■□□□□ 0.88
CCDC140-201ENST00000295226 USP19O94966 1318 aa20.51■□□□□ 0.87
CCDC140-201ENST00000295226 GCP02774 474 aa20.51■□□□□ 0.87
CCDC140-201ENST00000295226 ZBTB7CA1YPR0 619 aa20.5■□□□□ 0.87
CCDC140-201ENST00000295226 CCDC184Q52MB2 194 aa20.5■□□□□ 0.87
CCDC140-201ENST00000295226 PNPLA6Q8IY17 1366 aa20.5■□□□□ 0.87
CCDC140-201ENST00000295226 PPM1GO15355 546 aaPredicted RBP20.49■□□□□ 0.87
CCDC140-201ENST00000295226 ZC3H6P61129 1189 aaKnown RBP20.49■□□□□ 0.87
CCDC140-201ENST00000295226 EMILIN1Q9Y6C2 1016 aa20.49■□□□□ 0.87
CCDC140-201ENST00000295226 MYBBP1AQ9BQG0 1328 aaKnown RBP20.49■□□□□ 0.87
CCDC140-201ENST00000295226 MTHFSP49914 203 aa20.48■□□□□ 0.87
CCDC140-201ENST00000295226 POLKQ9UBT6 870 aa20.48■□□□□ 0.87
CCDC140-201ENST00000295226 MAP2P11137 1827 aaKnown RBP20.48■□□□□ 0.87
CCDC140-201ENST00000295226 USP54Q70EL1 1684 aa20.48■□□□□ 0.87
CCDC140-201ENST00000295226 HAP1P54257 671 aaPredicted RBP20.47■□□□□ 0.87
CCDC140-201ENST00000295226 KCNH5Q8NCM2 988 aa20.46■□□□□ 0.87
CCDC140-201ENST00000295226 FBXO41Q8TF61 875 aa20.46■□□□□ 0.87
CCDC140-201ENST00000295226 SLIT3O75094 1523 aa20.46■□□□□ 0.87
CCDC140-201ENST00000295226 NUTM2BA6NNL0 878 aaPredicted RBP20.45■□□□□ 0.86
CCDC140-201ENST00000295226 NUTM2EB1AL46 878 aaPredicted RBP20.45■□□□□ 0.86
CCDC140-201ENST00000295226 CENPBP07199 599 aaPredicted RBP20.45■□□□□ 0.86
CCDC140-201ENST00000295226 NUTM2AQ8IVF1 878 aaPredicted RBP20.45■□□□□ 0.86
CCDC140-201ENST00000295226 MAP3K19Q56UN5 1328 aa20.45■□□□□ 0.86
CCDC140-201ENST00000295226 NFAT5O94916 1531 aa20.45■□□□□ 0.86
CCDC140-201ENST00000295226 CRYBG1Q9Y4K1 1723 aa20.45■□□□□ 0.86
CCDC140-201ENST00000295226 PHRF1Q9P1Y6 1649 aaKnown RBP20.44■□□□□ 0.86
CCDC140-201ENST00000295226 AATKQ6ZMQ8 1374 aa20.44■□□□□ 0.86
CCDC140-201ENST00000295226 JCADQ9P266 1359 aa20.43■□□□□ 0.86
CCDC140-201ENST00000295226 CHRNA2Q15822 529 aa20.42■□□□□ 0.86
CCDC140-201ENST00000295226 ARHGEF25Q86VW2 580 aa20.42■□□□□ 0.86
CCDC140-201ENST00000295226 AMPHP49418 695 aa20.42■□□□□ 0.86
CCDC140-201ENST00000295226 ABCA3Q99758 1704 aa20.41■□□□□ 0.86
CCDC140-201ENST00000295226 COL22A1Q8NFW1 1626 aaPredicted RBP20.41■□□□□ 0.86
CCDC140-201ENST00000295226 ADAMTS2O95450 1211 aa20.41■□□□□ 0.86
CCDC140-201ENST00000295226 KIAA0232Q92628 1395 aa20.41■□□□□ 0.86
CCDC140-201ENST00000295226 PEAK1Q9H792 1746 aa20.4■□□□□ 0.86
CCDC140-201ENST00000295226 HSP90AB2PQ58FF8 381 aa20.39■□□□□ 0.86
CCDC140-201ENST00000295226 MRS2Q9HD23 443 aa20.39■□□□□ 0.86
CCDC140-201ENST00000295226 LTN1O94822 1766 aa20.39■□□□□ 0.85
CCDC140-201ENST00000295226 SHPRHQ149N8 1683 aa20.38■□□□□ 0.85
CCDC140-201ENST00000295226 FAM83GA6ND36 823 aa20.38■□□□□ 0.85
CCDC140-201ENST00000295226 HOXC9P31274 260 aa20.38■□□□□ 0.85
CCDC140-201ENST00000295226 AXIN2Q9Y2T1 843 aa20.38■□□□□ 0.85
CCDC140-201ENST00000295226 PRDM11Q9NQV5 511 aa20.37■□□□□ 0.85
CCDC140-201ENST00000295226 CCER2I3L3R5 266 aa20.36■□□□□ 0.85
CCDC140-201ENST00000295226 LTV1Q96GA3 475 aaPredicted RBP20.36■□□□□ 0.85
CCDC140-201ENST00000295226 IP6K1Q92551 441 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms