RNA–Protein interactions for RNA: ENST00000295008.8

MRPL55-201, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 632 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-201ENST00000295008 PSME1Q06323 249 aa21.86■■□□□ 1.09
MRPL55-201ENST00000295008 PHLPP1O60346 1717 aa21.86■■□□□ 1.09
MRPL55-201ENST00000295008 ILDR2Q71H61 639 aa21.84■■□□□ 1.09
MRPL55-201ENST00000295008 KRT28Q7Z3Y7 464 aa21.84■■□□□ 1.09
MRPL55-201ENST00000295008 PIK3C2AO00443 1686 aa21.84■■□□□ 1.09
MRPL55-201ENST00000295008 BRD4O60885 1362 aaPredicted RBP21.84■■□□□ 1.09
MRPL55-201ENST00000295008 ALS2Q96Q42 1657 aa21.83■■□□□ 1.09
MRPL55-201ENST00000295008 PER1O15534 1290 aaPredicted RBP21.83■■□□□ 1.09
MRPL55-201ENST00000295008 COL16A1Q07092 1604 aaPredicted RBP21.83■■□□□ 1.08
MRPL55-201ENST00000295008 TTC21BQ7Z4L5 1316 aa21.82■■□□□ 1.08
MRPL55-201ENST00000295008 SOS2Q07890 1332 aaPredicted RBP21.81■■□□□ 1.08
MRPL55-201ENST00000295008 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.81■■□□□ 1.08
MRPL55-201ENST00000295008 KNSTRNQ9Y448 316 aa21.81■■□□□ 1.08
MRPL55-201ENST00000295008 SBNO1A3KN83 1393 aa21.81■■□□□ 1.08
MRPL55-201ENST00000295008 TTC21AQ8NDW8 1320 aa21.8■■□□□ 1.08
MRPL55-201ENST00000295008 TNS3Q68CZ2 1445 aa21.8■■□□□ 1.08
MRPL55-201ENST00000295008 ANKRD26Q9UPS8 1709 aa21.8■■□□□ 1.08
MRPL55-201ENST00000295008 USP54Q70EL1 1684 aa21.79■■□□□ 1.08
MRPL55-201ENST00000295008 SOCS7O14512 581 aa21.79■■□□□ 1.08
MRPL55-201ENST00000295008 PAK3O75914 559 aaPredicted RBP21.79■■□□□ 1.08
MRPL55-201ENST00000295008 CGNL1Q0VF96 1302 aa21.79■■□□□ 1.08
MRPL55-201ENST00000295008 MARF1Q9Y4F3 1742 aaKnown RBP21.78■■□□□ 1.08
MRPL55-201ENST00000295008 AMER1Q5JTC6 1135 aaPredicted RBP21.77■■□□□ 1.08
MRPL55-201ENST00000295008 NME9Q86XW9 330 aa21.77■■□□□ 1.08
MRPL55-201ENST00000295008 SPATA31A3Q5VYP0 1347 aa21.76■■□□□ 1.07
MRPL55-201ENST00000295008 NSD2O96028 1365 aa21.75■■□□□ 1.07
MRPL55-201ENST00000295008 NPC1L1Q9UHC9 1359 aa21.74■■□□□ 1.07
MRPL55-201ENST00000295008 OVOS2A0A0J9YW53 1432 aa21.74■■□□□ 1.07
MRPL55-201ENST00000295008 OVOS2Q6IE36 1432 aa21.74■■□□□ 1.07
MRPL55-201ENST00000295008 FYB1O15117 783 aa21.74■■□□□ 1.07
MRPL55-201ENST00000295008 MED1Q15648 1581 aaPredicted RBP21.74■■□□□ 1.07
MRPL55-201ENST00000295008 GGNBP2Q9H3C7 697 aa21.73■■□□□ 1.07
MRPL55-201ENST00000295008 ZRANB1Q9UGI0 708 aa21.73■■□□□ 1.07
MRPL55-201ENST00000295008 ARHGEF10O15013 1369 aa21.73■■□□□ 1.07
MRPL55-201ENST00000295008 CRYBG1Q9Y4K1 1723 aa21.72■■□□□ 1.07
MRPL55-201ENST00000295008 CNGB1Q14028 1251 aaPredicted RBP21.72■■□□□ 1.07
MRPL55-201ENST00000295008 CC2D1BQ5T0F9 858 aaKnown RBP21.72■■□□□ 1.07
MRPL55-201ENST00000295008 LMOD2Q6P5Q4 547 aa21.72■■□□□ 1.07
MRPL55-201ENST00000295008 ABTB2Q8N961 1025 aa21.72■■□□□ 1.07
MRPL55-201ENST00000295008 USP31Q70CQ4 1352 aa21.72■■□□□ 1.07
MRPL55-201ENST00000295008 COL22A1Q8NFW1 1626 aaPredicted RBP21.71■■□□□ 1.07
MRPL55-201ENST00000295008 PHRF1Q9P1Y6 1649 aaKnown RBP21.71■■□□□ 1.07
MRPL55-201ENST00000295008 NUTM2GQ5VZR2 741 aa21.71■■□□□ 1.07
MRPL55-201ENST00000295008 ABCA3Q99758 1704 aa21.71■■□□□ 1.07
MRPL55-201ENST00000295008 SHPRHQ149N8 1683 aa21.69■■□□□ 1.06
MRPL55-201ENST00000295008 NLRP6P59044 892 aa21.69■■□□□ 1.06
MRPL55-201ENST00000295008 DIEXFQ68CQ4 756 aaKnown RBP21.69■■□□□ 1.06
MRPL55-201ENST00000295008 LRRC59Q96AG4 307 aaKnown RBP21.69■■□□□ 1.06
MRPL55-201ENST00000295008 SLIT3O75094 1523 aa21.69■■□□□ 1.06
MRPL55-201ENST00000295008 COG3Q96JB2 828 aa21.68■■□□□ 1.06
MRPL55-201ENST00000295008 PNPLA6Q8IY17 1366 aa21.68■■□□□ 1.06
MRPL55-201ENST00000295008 USP19O94966 1318 aa21.67■■□□□ 1.06
MRPL55-201ENST00000295008 HSPA1LP34931 641 aa21.67■■□□□ 1.06
MRPL55-201ENST00000295008 PARD3Q8TEW0 1356 aa21.66■■□□□ 1.06
MRPL55-201ENST00000295008 NLRP13Q86W25 1043 aa21.66■■□□□ 1.06
MRPL55-201ENST00000295008 MORC1Q86VD1 984 aa21.65■■□□□ 1.06
MRPL55-201ENST00000295008 NFAT5O94916 1531 aa21.65■■□□□ 1.06
MRPL55-201ENST00000295008 PLEKHG5O94827 1062 aa21.64■■□□□ 1.05
MRPL55-201ENST00000295008 JCADQ9P266 1359 aa21.62■■□□□ 1.05
MRPL55-201ENST00000295008 ANP32CO43423 234 aa21.61■■□□□ 1.05
MRPL55-201ENST00000295008 CABLES1Q8TDN4 633 aa21.61■■□□□ 1.05
MRPL55-201ENST00000295008 PRKRIP1Q9H875 184 aaPredicted RBP21.61■■□□□ 1.05
MRPL55-201ENST00000295008 SOX12O15370 315 aa21.6■■□□□ 1.05
MRPL55-201ENST00000295008 TNNT2P45379 298 aaPredicted RBP21.6■■□□□ 1.05
MRPL55-201ENST00000295008 RALBP1Q15311 655 aa21.59■■□□□ 1.05
MRPL55-201ENST00000295008 LTN1O94822 1766 aa21.58■■□□□ 1.04
MRPL55-201ENST00000295008 AATKQ6ZMQ8 1374 aa21.58■■□□□ 1.04
MRPL55-201ENST00000295008 GCP02774 474 aa21.57■■□□□ 1.04
MRPL55-201ENST00000295008 KCNH5Q8NCM2 988 aa21.57■■□□□ 1.04
MRPL55-201ENST00000295008 FBLN1P23142 703 aa21.56■■□□□ 1.04
MRPL55-201ENST00000295008 PEAK1Q9H792 1746 aa21.55■■□□□ 1.04
MRPL55-201ENST00000295008 HAP1P54257 671 aaPredicted RBP21.55■■□□□ 1.04
MRPL55-201ENST00000295008 SMG6Q86US8 1419 aaKnown RBP21.55■■□□□ 1.04
MRPL55-201ENST00000295008 MAP2P11137 1827 aaKnown RBP21.54■■□□□ 1.04
MRPL55-201ENST00000295008 MYBBP1AQ9BQG0 1328 aaKnown RBP21.54■■□□□ 1.04
MRPL55-201ENST00000295008 PPP2R1AP30153 589 aa21.53■■□□□ 1.04
MRPL55-201ENST00000295008 RRS1Q15050 365 aaKnown RBP21.53■■□□□ 1.04
MRPL55-201ENST00000295008 MAP3K19Q56UN5 1328 aa21.52■■□□□ 1.03
MRPL55-201ENST00000295008 SPATA31A6Q5VVP1 1343 aa21.52■■□□□ 1.03
MRPL55-201ENST00000295008 LRP6O75581 1613 aa21.51■■□□□ 1.03
MRPL55-201ENST00000295008 CPDO75976 1380 aa21.51■■□□□ 1.03
MRPL55-201ENST00000295008 ZC3H6P61129 1189 aaKnown RBP21.51■■□□□ 1.03
MRPL55-201ENST00000295008 POLKQ9UBT6 870 aa21.51■■□□□ 1.03
MRPL55-201ENST00000295008 EMILIN1Q9Y6C2 1016 aa21.51■■□□□ 1.03
MRPL55-201ENST00000295008 KIAA0232Q92628 1395 aa21.5■■□□□ 1.03
MRPL55-201ENST00000295008 NUTM2BA6NNL0 878 aaPredicted RBP21.5■■□□□ 1.03
MRPL55-201ENST00000295008 NUTM2EB1AL46 878 aaPredicted RBP21.5■■□□□ 1.03
MRPL55-201ENST00000295008 NUTM2AQ8IVF1 878 aaPredicted RBP21.5■■□□□ 1.03
MRPL55-201ENST00000295008 CDK12Q9NYV4 1490 aaPredicted RBP21.5■■□□□ 1.03
MRPL55-201ENST00000295008 ABCC6O95255 1503 aa21.5■■□□□ 1.03
MRPL55-201ENST00000295008 ZBTB7CA1YPR0 619 aa21.49■■□□□ 1.03
MRPL55-201ENST00000295008 ARHGEF25Q86VW2 580 aa21.49■■□□□ 1.03
MRPL55-201ENST00000295008 RTL1A6NKG5 1358 aa21.48■■□□□ 1.03
MRPL55-201ENST00000295008 COL18A1P39060 1754 aa21.48■■□□□ 1.03
MRPL55-201ENST00000295008 LMO7Q8WWI1 1683 aa21.48■■□□□ 1.03
MRPL55-201ENST00000295008 COL14A1Q05707 1796 aaKnown RBP21.48■■□□□ 1.03
MRPL55-201ENST00000295008 MTHFSP49914 203 aa21.47■■□□□ 1.03
MRPL55-201ENST00000295008 MIER1Q8N108 512 aa21.47■■□□□ 1.03
MRPL55-201ENST00000295008 FLT4P35916 1363 aa21.47■■□□□ 1.03
MRPL55-201ENST00000295008 KIF24Q5T7B8 1368 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms