RNA–Protein interactions for RNA: ENST00000294161.10

TTC9C-201, Transcript of tetratricopeptide repeat domain 9C, humanhuman

TSL 1 (best)

Gene TTC9C, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9C-201ENST00000294161 ROBO2Q9HCK4 1378 aa19.24■□□□□ 0.67
TTC9C-201ENST00000294161 XRN1Q8IZH2 1706 aaKnown RBP19.24■□□□□ 0.67
TTC9C-201ENST00000294161 ATP7BP35670 1465 aa19.23■□□□□ 0.67
TTC9C-201ENST00000294161 PNNQ9H307 717 aaKnown RBP19.23■□□□□ 0.67
TTC9C-201ENST00000294161 TCP11L2Q8N4U5 519 aa19.23■□□□□ 0.67
TTC9C-201ENST00000294161 IQSEC2Q5JU85 1478 aa19.22■□□□□ 0.67
TTC9C-201ENST00000294161 ZNF335Q9H4Z2 1342 aaPredicted RBP19.22■□□□□ 0.67
TTC9C-201ENST00000294161 KNDC1Q76NI1 1749 aa19.21■□□□□ 0.67
TTC9C-201ENST00000294161 U2AF1L5P0DN76 240 aaPredicted RBP19.21■□□□□ 0.67
TTC9C-201ENST00000294161 MS4A1P11836 297 aa19.21■□□□□ 0.67
TTC9C-201ENST00000294161 U2AF1Q01081 240 aaKnown RBP eCLIP19.21■□□□□ 0.67
TTC9C-201ENST00000294161 CD163L1Q9NR16 1453 aa19.21■□□□□ 0.67
TTC9C-201ENST00000294161 FAM135BQ49AJ0 1406 aa19.21■□□□□ 0.67
TTC9C-201ENST00000294161 FYB1O15117 783 aa19.21■□□□□ 0.67
TTC9C-201ENST00000294161 PHF23Q9BUL5 403 aaPredicted RBP19.21■□□□□ 0.67
TTC9C-201ENST00000294161 GGNBP2Q9H3C7 697 aa19.2■□□□□ 0.66
TTC9C-201ENST00000294161 CABP1Q9NZU7 370 aa19.2■□□□□ 0.66
TTC9C-201ENST00000294161 CPS1P31327 1500 aa19.19■□□□□ 0.66
TTC9C-201ENST00000294161 ANP32EQ9BTT0 268 aa19.19■□□□□ 0.66
TTC9C-201ENST00000294161 MYH16Q9H6N6 1097 aa19.18■□□□□ 0.66
TTC9C-201ENST00000294161 NWD1Q149M9 1564 aa19.17■□□□□ 0.66
TTC9C-201ENST00000294161 KIF20BQ96Q89 1820 aa19.17■□□□□ 0.66
TTC9C-201ENST00000294161 TECPR2O15040 1411 aa19.17■□□□□ 0.66
TTC9C-201ENST00000294161 SPINK5Q9NQ38 1064 aaPredicted RBP19.17■□□□□ 0.66
TTC9C-201ENST00000294161 PIK3R4Q99570 1358 aa19.17■□□□□ 0.66
TTC9C-201ENST00000294161 WASLO00401 505 aaPredicted RBP19.16■□□□□ 0.66
TTC9C-201ENST00000294161 PDE3AQ14432 1141 aa19.16■□□□□ 0.66
TTC9C-201ENST00000294161 CENPQQ7L2Z9 268 aaPredicted RBP19.16■□□□□ 0.66
TTC9C-201ENST00000294161 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.16■□□□□ 0.66
TTC9C-201ENST00000294161 NEUROD2Q15784 382 aa19.15■□□□□ 0.66
TTC9C-201ENST00000294161 ERICH6Q7L0X2 663 aa19.15■□□□□ 0.66
TTC9C-201ENST00000294161 MAPK8IP3Q9UPT6 1336 aa19.15■□□□□ 0.66
TTC9C-201ENST00000294161 C20orf194Q5TEA3 1177 aa19.14■□□□□ 0.65
TTC9C-201ENST00000294161 ADGRB2O60241 1585 aa19.14■□□□□ 0.65
TTC9C-201ENST00000294161 DIAPH1O60610 1272 aaKnown RBP19.14■□□□□ 0.65
TTC9C-201ENST00000294161 AAMPQ13685 434 aa19.14■□□□□ 0.65
TTC9C-201ENST00000294161 DMRT2Q9Y5R5 561 aa19.14■□□□□ 0.65
TTC9C-201ENST00000294161 PTCH1Q13635 1447 aa19.13■□□□□ 0.65
TTC9C-201ENST00000294161 COL3A1P02461 1466 aaPredicted RBP19.13■□□□□ 0.65
TTC9C-201ENST00000294161 U2SURPO15042 1029 aaKnown RBP19.13■□□□□ 0.65
TTC9C-201ENST00000294161 CT47B1P0C2W7 299 aaPredicted RBP19.13■□□□□ 0.65
TTC9C-201ENST00000294161 EDC4Q6P2E9 1401 aaKnown RBP19.13■□□□□ 0.65
TTC9C-201ENST00000294161 PNPLA6Q8IY17 1366 aa19.12■□□□□ 0.65
TTC9C-201ENST00000294161 CANXP27824 592 aaKnown RBP19.12■□□□□ 0.65
TTC9C-201ENST00000294161 ANP32AP39687 249 aaKnown RBP19.12■□□□□ 0.65
TTC9C-201ENST00000294161 RRP7AQ9Y3A4 280 aaKnown RBP19.12■□□□□ 0.65
TTC9C-201ENST00000294161 PROSER2Q86WR7 435 aaPredicted RBP19.11■□□□□ 0.65
TTC9C-201ENST00000294161 NEFMP07197 916 aa19.11■□□□□ 0.65
TTC9C-201ENST00000294161 NALCNQ8IZF0 1738 aa19.11■□□□□ 0.65
TTC9C-201ENST00000294161 CPSF1Q10570 1443 aaKnown RBP19.1■□□□□ 0.65
TTC9C-201ENST00000294161 PPIP5K1Q6PFW1 1433 aa19.1■□□□□ 0.65
TTC9C-201ENST00000294161 BCAR3O75815 825 aa19.09■□□□□ 0.65
TTC9C-201ENST00000294161 ZNF692Q9BU19 519 aaPredicted RBP19.09■□□□□ 0.65
TTC9C-201ENST00000294161 CCDC61Q9Y6R9 512 aa19.09■□□□□ 0.65
TTC9C-201ENST00000294161 XIRP1Q702N8 1843 aaKnown RBP19.09■□□□□ 0.65
TTC9C-201ENST00000294161 IL16Q14005 1332 aa19.09■□□□□ 0.65
TTC9C-201ENST00000294161 KDM2BQ8NHM5 1336 aa19.09■□□□□ 0.65
TTC9C-201ENST00000294161 NUTM2FA1L443 756 aa19.08■□□□□ 0.64
TTC9C-201ENST00000294161 NUDT16Q96DE0 195 aaKnown RBP19.08■□□□□ 0.64
TTC9C-201ENST00000294161 PLEKHF1Q96S99 279 aa19.08■□□□□ 0.64
TTC9C-201ENST00000294161 TMEM94Q12767 1356 aa19.08■□□□□ 0.64
TTC9C-201ENST00000294161 FCHSD2O94868 740 aa19.07■□□□□ 0.64
TTC9C-201ENST00000294161 C14orf37Q86TY3 774 aa19.07■□□□□ 0.64
TTC9C-201ENST00000294161 CDC42BPGQ6DT37 1551 aa19.07■□□□□ 0.64
TTC9C-201ENST00000294161 TMPOP42166 694 aaKnown RBP19.07■□□□□ 0.64
TTC9C-201ENST00000294161 RARSP54136 660 aaKnown RBP19.07■□□□□ 0.64
TTC9C-201ENST00000294161 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.07■□□□□ 0.64
TTC9C-201ENST00000294161 LRRC7Q96NW7 1537 aa19.07■□□□□ 0.64
TTC9C-201ENST00000294161 MSH5O43196 834 aa19.05■□□□□ 0.64
TTC9C-201ENST00000294161 AATKQ6ZMQ8 1374 aa19.05■□□□□ 0.64
TTC9C-201ENST00000294161 PDE4AP27815 886 aa19.04■□□□□ 0.64
TTC9C-201ENST00000294161 LTBP4Q8N2S1 1624 aa19.04■□□□□ 0.64
TTC9C-201ENST00000294161 COG3Q96JB2 828 aa19.03■□□□□ 0.64
TTC9C-201ENST00000294161 POLKQ9UBT6 870 aa19.03■□□□□ 0.64
TTC9C-201ENST00000294161 BACH2Q9BYV9 841 aa19.02■□□□□ 0.64
TTC9C-201ENST00000294161 MON2Q7Z3U7 1717 aa19.01■□□□□ 0.63
TTC9C-201ENST00000294161 CALD1Q05682 793 aaKnown RBP19.01■□□□□ 0.63
TTC9C-201ENST00000294161 ADGRL3Q9HAR2 1447 aa19.01■□□□□ 0.63
TTC9C-201ENST00000294161 ITSN1Q15811 1721 aa19.01■□□□□ 0.63
TTC9C-201ENST00000294161 RIPK4P57078 832 aa19■□□□□ 0.63
TTC9C-201ENST00000294161 FRAT1Q92837 279 aaPredicted RBP19■□□□□ 0.63
TTC9C-201ENST00000294161 RGPD8O14715 1765 aaPredicted RBP19■□□□□ 0.63
TTC9C-201ENST00000294161 CDK12Q9NYV4 1490 aaPredicted RBP19■□□□□ 0.63
TTC9C-201ENST00000294161 IPO9Q96P70 1041 aaKnown RBP19■□□□□ 0.63
TTC9C-201ENST00000294161 PRR36Q9H6K5 1346 aa18.99■□□□□ 0.63
TTC9C-201ENST00000294161 AKAP12Q02952 1782 aa18.99■□□□□ 0.63
TTC9C-201ENST00000294161 CLUAP1Q96AJ1 413 aa18.99■□□□□ 0.63
TTC9C-201ENST00000294161 PPM1GO15355 546 aaPredicted RBP18.98■□□□□ 0.63
TTC9C-201ENST00000294161 TRIM35Q9UPQ4 493 aa18.98■□□□□ 0.63
TTC9C-201ENST00000294161 PMFBP1Q8TBY8 1022 aa18.97■□□□□ 0.63
TTC9C-201ENST00000294161 NME9Q86XW9 330 aa18.97■□□□□ 0.63
TTC9C-201ENST00000294161 NOP58Q9Y2X3 529 aaKnown RBP18.97■□□□□ 0.63
TTC9C-201ENST00000294161 FMN2Q9NZ56 1722 aa18.97■□□□□ 0.63
TTC9C-201ENST00000294161 MAP2P11137 1827 aaKnown RBP18.96■□□□□ 0.63
TTC9C-201ENST00000294161 PLEKHG3A1L390 1219 aa18.96■□□□□ 0.63
TTC9C-201ENST00000294161 ZKSCAN2Q63HK3 967 aa18.96■□□□□ 0.63
TTC9C-201ENST00000294161 RSPH6AQ9H0K4 717 aa18.96■□□□□ 0.63
TTC9C-201ENST00000294161 PANK1Q8TE04 598 aa18.95■□□□□ 0.62
TTC9C-201ENST00000294161 COG6Q9Y2V7 657 aa18.95■□□□□ 0.62
TTC9C-201ENST00000294161 PRKAR2BP31323 418 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 103.3 ms