RNA–Protein interactions for RNA: ENST00000293406.7

LSM12-201, Transcript of LSM12 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM12, Length 2,308 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM12-201ENST00000293406 C22orf23Q9BZE7 217 aa24.29■■□□□ 1.48
LSM12-201ENST00000293406 SIGLEC1Q9BZZ2 1709 aa24.28■■□□□ 1.48
LSM12-201ENST00000293406 IL16Q14005 1332 aa24.27■■□□□ 1.48
LSM12-201ENST00000293406 COL3A1P02461 1466 aaPredicted RBP24.27■■□□□ 1.48
LSM12-201ENST00000293406 MFAP1P55081 439 aaKnown RBP24.27■■□□□ 1.48
LSM12-201ENST00000293406 STK26Q9P289 416 aa24.27■■□□□ 1.48
LSM12-201ENST00000293406 NOB1Q9ULX3 412 aaKnown RBP24.27■■□□□ 1.48
LSM12-201ENST00000293406 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.26■■□□□ 1.47
LSM12-201ENST00000293406 FAM43AQ8N2R8 423 aa24.25■■□□□ 1.47
LSM12-201ENST00000293406 SPRYD3Q8NCJ5 442 aa24.25■■□□□ 1.47
LSM12-201ENST00000293406 RIPK4P57078 832 aa24.24■■□□□ 1.47
LSM12-201ENST00000293406 L1TD1Q5T7N2 865 aaKnown RBP24.24■■□□□ 1.47
LSM12-201ENST00000293406 SMC5Q8IY18 1101 aa24.24■■□□□ 1.47
LSM12-201ENST00000293406 TERF2IPQ9NYB0 399 aa24.24■■□□□ 1.47
LSM12-201ENST00000293406 FYB1O15117 783 aa24.23■■□□□ 1.47
LSM12-201ENST00000293406 TMEM57Q8N5G2 664 aa24.23■■□□□ 1.47
LSM12-201ENST00000293406 ATAD2Q6PL18 1390 aa24.23■■□□□ 1.47
LSM12-201ENST00000293406 IDI1Q13907 227 aa24.22■■□□□ 1.47
LSM12-201ENST00000293406 KIF16BQ96L93 1317 aa24.22■■□□□ 1.47
LSM12-201ENST00000293406 ZBTB40Q9NUA8 1239 aa24.21■■□□□ 1.47
LSM12-201ENST00000293406 ZFYVE9O95405 1425 aa24.21■■□□□ 1.47
LSM12-201ENST00000293406 IPO8O15397 1037 aaKnown RBP24.21■■□□□ 1.47
LSM12-201ENST00000293406 SENP3Q9H4L4 574 aaPredicted RBP24.21■■□□□ 1.47
LSM12-201ENST00000293406 DIAPH1O60610 1272 aaKnown RBP24.2■■□□□ 1.46
LSM12-201ENST00000293406 PNNQ9H307 717 aaKnown RBP24.2■■□□□ 1.46
LSM12-201ENST00000293406 MED14O60244 1454 aa24.2■■□□□ 1.46
LSM12-201ENST00000293406 CHMP5Q9NZZ3 219 aa24.19■■□□□ 1.46
LSM12-201ENST00000293406 MCM4P33991 863 aa24.19■■□□□ 1.46
LSM12-201ENST00000293406 MINK1Q8N4C8 1332 aaPredicted RBP24.18■■□□□ 1.46
LSM12-201ENST00000293406 ARHGAP31Q2M1Z3 1444 aa24.17■■□□□ 1.46
LSM12-201ENST00000293406 ANKRD26Q9UPS8 1709 aa24.17■■□□□ 1.46
LSM12-201ENST00000293406 RAPGEF3O95398 923 aa24.17■■□□□ 1.46
LSM12-201ENST00000293406 SLC52A1Q9NWF4 448 aa24.17■■□□□ 1.46
LSM12-201ENST00000293406 PTPRMP28827 1452 aa24.17■■□□□ 1.46
LSM12-201ENST00000293406 PRAM1Q96QH2 718 aa24.16■■□□□ 1.46
LSM12-201ENST00000293406 CD163L1Q9NR16 1453 aa24.16■■□□□ 1.46
LSM12-201ENST00000293406 ALDH1L2Q3SY69 923 aa24.16■■□□□ 1.46
LSM12-201ENST00000293406 HSCBQ8IWL3 235 aa24.16■■□□□ 1.46
LSM12-201ENST00000293406 NUCB1Q02818 461 aa24.15■■□□□ 1.46
LSM12-201ENST00000293406 HDGFL2Q7Z4V5 671 aaPredicted RBP24.15■■□□□ 1.46
LSM12-201ENST00000293406 PNPLA6Q8IY17 1366 aa24.14■■□□□ 1.46
LSM12-201ENST00000293406 DIP2CQ9Y2E4 1556 aa24.11■■□□□ 1.45
LSM12-201ENST00000293406 GOLGA6L3A6NEY3 463 aa24.11■■□□□ 1.45
LSM12-201ENST00000293406 FCHSD2O94868 740 aa24.11■■□□□ 1.45
LSM12-201ENST00000293406 LNPKQ9C0E8 428 aa24.11■■□□□ 1.45
LSM12-201ENST00000293406 YTHDC2Q9H6S0 1430 aaKnown RBP24.11■■□□□ 1.45
LSM12-201ENST00000293406 CLTCQ00610 1675 aaKnown RBP24.11■■□□□ 1.45
LSM12-201ENST00000293406 CHD1LQ86WJ1 897 aa24.1■■□□□ 1.45
LSM12-201ENST00000293406 RBM25P49756 843 aaKnown RBP24.09■■□□□ 1.45
LSM12-201ENST00000293406 GZF1Q9H116 711 aaPredicted RBP24.09■■□□□ 1.45
LSM12-201ENST00000293406 NEO1Q92859 1461 aa24.09■■□□□ 1.45
LSM12-201ENST00000293406 ZNF428Q96B54 188 aa24.09■■□□□ 1.45
LSM12-201ENST00000293406 FSD2A1L4K1 749 aa24.08■■□□□ 1.45
LSM12-201ENST00000293406 TRAK2O60296 914 aa24.08■■□□□ 1.45
LSM12-201ENST00000293406 ARXQ96QS3 562 aa24.08■■□□□ 1.45
LSM12-201ENST00000293406 CDK19Q9BWU1 502 aa24.08■■□□□ 1.45
LSM12-201ENST00000293406 LRRC7Q96NW7 1537 aa24.08■■□□□ 1.44
LSM12-201ENST00000293406 PRKAR2BP31323 418 aa24.07■■□□□ 1.44
LSM12-201ENST00000293406 CABP1Q9NZU7 370 aa24.07■■□□□ 1.44
LSM12-201ENST00000293406 BRPF1P55201 1214 aaPredicted RBP24.07■■□□□ 1.44
LSM12-201ENST00000293406 MYO5BQ9ULV0 1848 aa24.07■■□□□ 1.44
LSM12-201ENST00000293406 XRCC6P12956 609 aaKnown RBP eCLIP24.06■■□□□ 1.447e-6■■□□□ 12
LSM12-201ENST00000293406 RSPH6AQ9H0K4 717 aa24.06■■□□□ 1.44
LSM12-201ENST00000293406 TMEM131LA2VDJ0 1609 aa24.06■■□□□ 1.44
LSM12-201ENST00000293406 ZNF692Q9BU19 519 aaPredicted RBP24.06■■□□□ 1.44
LSM12-201ENST00000293406 CDC42BPGQ6DT37 1551 aa24.06■■□□□ 1.44
LSM12-201ENST00000293406 FAM135BQ49AJ0 1406 aa24.05■■□□□ 1.44
LSM12-201ENST00000293406 SNX21Q969T3 373 aa24.05■■□□□ 1.44
LSM12-201ENST00000293406 NCOA3Q9Y6Q9 1424 aa24.04■■□□□ 1.44
LSM12-201ENST00000293406 DDX11L8A8MPP1 907 aa24.04■■□□□ 1.44
LSM12-201ENST00000293406 BMP2KLQ5H9B9 411 aa24.04■■□□□ 1.44
LSM12-201ENST00000293406 PPIP5K1Q6PFW1 1433 aa24.04■■□□□ 1.44
LSM12-201ENST00000293406 KIF20BQ96Q89 1820 aa24.04■■□□□ 1.44
LSM12-201ENST00000293406 CHMP4BQ9H444 224 aaKnown RBP24.04■■□□□ 1.44
LSM12-201ENST00000293406 ARHGEF40Q8TER5 1519 aa24.03■■□□□ 1.44
LSM12-201ENST00000293406 ZBTB7BO15156 539 aaPredicted RBP24.02■■□□□ 1.44
LSM12-201ENST00000293406 ANKRD45Q5TZF3 282 aa24.02■■□□□ 1.44
LSM12-201ENST00000293406 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.02■■□□□ 1.44
LSM12-201ENST00000293406 GCC1Q96CN9 775 aa24.02■■□□□ 1.44
LSM12-201ENST00000293406 POLKQ9UBT6 870 aa24.02■■□□□ 1.44
LSM12-201ENST00000293406 DDIT3P35638 169 aa24.01■■□□□ 1.43
LSM12-201ENST00000293406 NFE2L2Q16236 605 aa24.01■■□□□ 1.43
LSM12-201ENST00000293406 RRAGDQ9NQL2 400 aaPredicted RBP24.01■■□□□ 1.43
LSM12-201ENST00000293406 PREX1Q8TCU6 1659 aa24.01■■□□□ 1.43
LSM12-201ENST00000293406 CALD1Q05682 793 aaKnown RBP24.01■■□□□ 1.43
LSM12-201ENST00000293406 VAMP4O75379 141 aa24■■□□□ 1.43
LSM12-201ENST00000293406 MRPL50Q8N5N7 158 aaKnown RBP24■■□□□ 1.43
LSM12-201ENST00000293406 ARHGAP45Q92619 1136 aa24■■□□□ 1.43
LSM12-201ENST00000293406 EIF5BO60841 1220 aaKnown RBP24■■□□□ 1.43
LSM12-201ENST00000293406 FBLN1P23142 703 aa24■■□□□ 1.43
LSM12-201ENST00000293406 PHACTR3Q96KR7 559 aa23.99■■□□□ 1.43
LSM12-201ENST00000293406 ALKQ9UM73 1620 aa23.99■■□□□ 1.43
LSM12-201ENST00000293406 HSP90AB1P08238 724 aaKnown RBP23.99■■□□□ 1.43
LSM12-201ENST00000293406 HMOX1P09601 288 aa23.99■■□□□ 1.43
LSM12-201ENST00000293406 PIK3R4Q99570 1358 aa23.98■■□□□ 1.43
LSM12-201ENST00000293406 THUMPD2Q9BTF0 503 aaKnown RBP23.98■■□□□ 1.43
LSM12-201ENST00000293406 C1orf115Q9H7X2 142 aa23.98■■□□□ 1.43
LSM12-201ENST00000293406 PTCH1Q13635 1447 aa23.98■■□□□ 1.43
LSM12-201ENST00000293406 PANK2Q9BZ23 570 aa23.98■■□□□ 1.43
LSM12-201ENST00000293406 YEATS2Q9ULM3 1422 aa23.97■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms