RNA–Protein interactions for RNA: ENST00000291552.8

U2AF1-201, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene U2AF1, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-201ENST00000291552 TRPM1Q7Z4N2 1603 aa36.55■■■■□ 3.44
U2AF1-201ENST00000291552 L3MBTL2Q969R5 705 aa36.54■■■■□ 3.44
U2AF1-201ENST00000291552 PHRF1Q9P1Y6 1649 aaKnown RBP36.54■■■■□ 3.44
U2AF1-201ENST00000291552 VPS72Q15906 364 aa36.53■■■■□ 3.44
U2AF1-201ENST00000291552 SIN3AQ96ST3 1273 aa36.52■■■■□ 3.44
U2AF1-201ENST00000291552 POLR3AO14802 1390 aaPredicted RBP36.51■■■■□ 3.43
U2AF1-201ENST00000291552 PAK3O75914 559 aaPredicted RBP36.47■■■■□ 3.43
U2AF1-201ENST00000291552 CENPJQ9HC77 1338 aaPredicted RBP36.46■■■■□ 3.43
U2AF1-201ENST00000291552 ACEP12821 1306 aa36.44■■■■□ 3.42
U2AF1-201ENST00000291552 CCDC61Q9Y6R9 512 aa36.44■■■■□ 3.42
U2AF1-201ENST00000291552 PLEKHG3A1L390 1219 aa36.42■■■■□ 3.42
U2AF1-201ENST00000291552 SEPT12Q8IYM1 358 aa36.41■■■■□ 3.42
U2AF1-201ENST00000291552 BTG4Q9NY30 223 aa36.41■■■■□ 3.42
U2AF1-201ENST00000291552 NBPF8Q3BBV2 869 aa36.4■■■■□ 3.42
U2AF1-201ENST00000291552 ONECUT3O60422 494 aaPredicted RBP36.39■■■■□ 3.42
U2AF1-201ENST00000291552 CCDC9Q9Y3X0 531 aaKnown RBP36.39■■■■□ 3.42
U2AF1-201ENST00000291552 NRKQ7Z2Y5 1582 aa36.38■■■■□ 3.41
U2AF1-201ENST00000291552 PPIP5K1Q6PFW1 1433 aa36.37■■■■□ 3.41
U2AF1-201ENST00000291552 NEUROD1Q13562 356 aa36.36■■■■□ 3.41
U2AF1-201ENST00000291552 CABP2Q9NPB3 220 aa36.35■■■■□ 3.41
U2AF1-201ENST00000291552 SRPK2P78362 688 aaKnown RBP36.34■■■■□ 3.41
U2AF1-201ENST00000291552 NUTM2GQ5VZR2 741 aa36.34■■■■□ 3.41
U2AF1-201ENST00000291552 KIAA0232Q92628 1395 aa36.34■■■■□ 3.41
U2AF1-201ENST00000291552 PRDM11Q9NQV5 511 aa36.33■■■■□ 3.41
U2AF1-201ENST00000291552 THSD7AQ9UPZ6 1657 aa36.32■■■■□ 3.4
U2AF1-201ENST00000291552 CCDC125Q86Z20 511 aa36.3■■■■□ 3.4
U2AF1-201ENST00000291552 BLMP54132 1417 aaPredicted RBP36.3■■■■□ 3.4
U2AF1-201ENST00000291552 SPATA31A5Q5VU36 1347 aa36.29■■■■□ 3.4
U2AF1-201ENST00000291552 SPATA31A7Q8IWB4 1347 aa36.29■■■■□ 3.4
U2AF1-201ENST00000291552 FAM98CQ17RN3 349 aaKnown RBP36.28■■■■□ 3.4
U2AF1-201ENST00000291552 ROCK2O75116 1388 aaKnown RBP36.27■■■■□ 3.4
U2AF1-201ENST00000291552 LMO7Q8WWI1 1683 aa36.27■■■■□ 3.4
U2AF1-201ENST00000291552 CHRNA2Q15822 529 aa36.27■■■■□ 3.4
U2AF1-201ENST00000291552 USP19O94966 1318 aa36.27■■■■□ 3.4
U2AF1-201ENST00000291552 KRT27Q7Z3Y8 459 aa36.26■■■■□ 3.4
U2AF1-201ENST00000291552 ZC3H6P61129 1189 aaKnown RBP36.24■■■■□ 3.39
U2AF1-201ENST00000291552 USP6P35125 1406 aa36.23■■■■□ 3.39
U2AF1-201ENST00000291552 ABTB2Q8N961 1025 aa36.22■■■■□ 3.39
U2AF1-201ENST00000291552 AKAP12Q02952 1782 aa36.21■■■■□ 3.39
U2AF1-201ENST00000291552 PIK3C2AO00443 1686 aa36.2■■■■□ 3.39
U2AF1-201ENST00000291552 CAMTA1Q9Y6Y1 1673 aa36.2■■■■□ 3.39
U2AF1-201ENST00000291552 CABP1Q9NZU7 370 aa36.2■■■■□ 3.39
U2AF1-201ENST00000291552 BRD4O60885 1362 aaPredicted RBP36.19■■■■□ 3.38
U2AF1-201ENST00000291552 A0A0G2JS52 829 aa36.19■■■■□ 3.38
U2AF1-201ENST00000291552 MYT1Q01538 1121 aa36.19■■■■□ 3.38
U2AF1-201ENST00000291552 SSH2Q76I76 1423 aa36.18■■■■□ 3.38
U2AF1-201ENST00000291552 CPDO75976 1380 aa36.18■■■■□ 3.38
U2AF1-201ENST00000291552 EVC2Q86UK5 1308 aa36.17■■■■□ 3.38
U2AF1-201ENST00000291552 SRCAPQ6ZRS2 3230 aa36.16■■■■□ 3.38
U2AF1-201ENST00000291552 SPATA31A1Q5TZJ5 1347 aa36.16■■■■□ 3.38
U2AF1-201ENST00000291552 DEFB132Q7Z7B7 95 aa36.16■■■■□ 3.38
U2AF1-201ENST00000291552 SLIT3O75094 1523 aa36.15■■■■□ 3.38
U2AF1-201ENST00000291552 STRN4Q9NRL3 753 aa36.14■■■■□ 3.38
U2AF1-201ENST00000291552 RGPD1P0DJD0 1748 aa36.12■■■■□ 3.37
U2AF1-201ENST00000291552 NLRP13Q86W25 1043 aa36.12■■■■□ 3.37
U2AF1-201ENST00000291552 TNS1Q9HBL0 1735 aaKnown RBP36.11■■■■□ 3.37
U2AF1-201ENST00000291552 ZRANB1Q9UGI0 708 aa36.1■■■■□ 3.37
U2AF1-201ENST00000291552 GCP02774 474 aa36.09■■■■□ 3.37
U2AF1-201ENST00000291552 FAM182BQ5T319 152 aa36.08■■■■□ 3.37
U2AF1-201ENST00000291552 SBNO2Q9Y2G9 1366 aa36.07■■■■□ 3.36
U2AF1-201ENST00000291552 MON2Q7Z3U7 1717 aa36.07■■■■□ 3.36
U2AF1-201ENST00000291552 COL18A1P39060 1754 aa36.07■■■■□ 3.36
U2AF1-201ENST00000291552 COL5A2P05997 1499 aaPredicted RBP36.05■■■■□ 3.36
U2AF1-201ENST00000291552 SF3B2Q13435 895 aaKnown RBP36.04■■■■□ 3.36
U2AF1-201ENST00000291552 LARP1Q6PKG0 1096 aaKnown RBP36.04■■■■□ 3.36
U2AF1-201ENST00000291552 CPSF1Q10570 1443 aaKnown RBP36.03■■■■□ 3.36
U2AF1-201ENST00000291552 NLRP6P59044 892 aa36.03■■■■□ 3.36
U2AF1-201ENST00000291552 TONSLQ96HA7 1378 aa36.02■■■■□ 3.36
U2AF1-201ENST00000291552 CARD11Q9BXL7 1154 aa36■■■■□ 3.35
U2AF1-201ENST00000291552 USP35Q9P2H5 1018 aa36■■■■□ 3.35
U2AF1-201ENST00000291552 EVA1CP58658 441 aa35.99■■■■□ 3.35
U2AF1-201ENST00000291552 TTC21BQ7Z4L5 1316 aa35.99■■■■□ 3.35
U2AF1-201ENST00000291552 PARP4Q9UKK3 1724 aaKnown RBP35.98■■■■□ 3.35
U2AF1-201ENST00000291552 RGPD5Q99666 1765 aa35.98■■■■□ 3.35
U2AF1-201ENST00000291552 BARGINQ6ZT62 677 aa35.98■■■■□ 3.35
U2AF1-201ENST00000291552 AATKQ6ZMQ8 1374 aa35.96■■■■□ 3.35
U2AF1-201ENST00000291552 CD163L1Q9NR16 1453 aa35.95■■■■□ 3.35
U2AF1-201ENST00000291552 ZNF692Q9BU19 519 aaPredicted RBP35.94■■■■□ 3.34
U2AF1-201ENST00000291552 WNK3Q9BYP7 1800 aa35.94■■■■□ 3.34
U2AF1-201ENST00000291552 USP54Q70EL1 1684 aa35.94■■■■□ 3.34
U2AF1-201ENST00000291552 NFAT5O94916 1531 aa35.93■■■■□ 3.34
U2AF1-201ENST00000291552 BAG6P46379 1132 aa35.93■■■■□ 3.34
U2AF1-201ENST00000291552 TRIM26Q12899 539 aaPredicted RBP35.93■■■■□ 3.34
U2AF1-201ENST00000291552 TCP11L2Q8N4U5 519 aa35.93■■■■□ 3.34
U2AF1-201ENST00000291552 DISP2A7MBM2 1401 aa35.92■■■■□ 3.34
U2AF1-201ENST00000291552 ZBTB7CA1YPR0 619 aa35.92■■■■□ 3.34
U2AF1-201ENST00000291552 CRB1P82279 1406 aa35.91■■■■□ 3.34
U2AF1-201ENST00000291552 KTN1Q86UP2 1357 aaKnown RBP35.91■■■■□ 3.34
U2AF1-201ENST00000291552 TTC21AQ8NDW8 1320 aa35.9■■■■□ 3.34
U2AF1-201ENST00000291552 LRRC37A3O60309 1634 aa35.88■■■■□ 3.33
U2AF1-201ENST00000291552 EN1Q05925 392 aaPredicted RBP35.87■■■■□ 3.33
U2AF1-201ENST00000291552 THRAP3Q9Y2W1 955 aaKnown RBP35.86■■■■□ 3.33
U2AF1-201ENST00000291552 FAM196AQ6ZSG2 479 aa35.85■■■■□ 3.33
U2AF1-201ENST00000291552 AXIN2Q9Y2T1 843 aa35.85■■■■□ 3.33
U2AF1-201ENST00000291552 PEAK1Q9H792 1746 aa35.85■■■■□ 3.33
U2AF1-201ENST00000291552 ARHGEF25Q86VW2 580 aa35.84■■■■□ 3.33
U2AF1-201ENST00000291552 TRIM37O94972 964 aa35.82■■■■□ 3.32
U2AF1-201ENST00000291552 SOX12O15370 315 aa35.8■■■■□ 3.32
U2AF1-201ENST00000291552 PDE3BQ13370 1112 aa35.8■■■■□ 3.32
U2AF1-201ENST00000291552 KCNH5Q8NCM2 988 aa35.8■■■■□ 3.32
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms