RNA–Protein interactions for RNA: ENST00000289957.2

CHRNB3-201, Transcript of cholinergic receptor nicotinic beta 3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNB3, Length 2,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB3-201ENST00000289957 PLEKHG5O94827 1062 aa15.51■□□□□ 0.07
CHRNB3-201ENST00000289957 NUTM2GQ5VZR2 741 aa15.51■□□□□ 0.07
CHRNB3-201ENST00000289957 PARD3Q8TEW0 1356 aa15.51■□□□□ 0.07
CHRNB3-201ENST00000289957 USP6P35125 1406 aa15.5■□□□□ 0.07
CHRNB3-201ENST00000289957 POLR3AO14802 1390 aaPredicted RBP15.5■□□□□ 0.07
CHRNB3-201ENST00000289957 NRKQ7Z2Y5 1582 aa15.49■□□□□ 0.07
CHRNB3-201ENST00000289957 FKBP8Q14318 412 aa15.48■□□□□ 0.07
CHRNB3-201ENST00000289957 CADPS2Q86UW7 1296 aa15.48■□□□□ 0.07
CHRNB3-201ENST00000289957 NCOA3Q9Y6Q9 1424 aa15.48■□□□□ 0.07
CHRNB3-201ENST00000289957 CGNL1Q0VF96 1302 aa15.48■□□□□ 0.07
CHRNB3-201ENST00000289957 TTC21BQ7Z4L5 1316 aa15.48■□□□□ 0.07
CHRNB3-201ENST00000289957 DCCP43146 1447 aa15.47■□□□□ 0.07
CHRNB3-201ENST00000289957 EDC4Q6P2E9 1401 aaKnown RBP15.47■□□□□ 0.07
CHRNB3-201ENST00000289957 SSH2Q76I76 1423 aa15.47■□□□□ 0.07
CHRNB3-201ENST00000289957 PAK3O75914 559 aaPredicted RBP15.47■□□□□ 0.07
CHRNB3-201ENST00000289957 SLAIN2Q9P270 581 aa15.47■□□□□ 0.07
CHRNB3-201ENST00000289957 SOX12O15370 315 aa15.47■□□□□ 0.07
CHRNB3-201ENST00000289957 BRINP3Q76B58 766 aa15.47■□□□□ 0.07
CHRNB3-201ENST00000289957 SENP3-EIF4A1A0A087X0R7 540 aa15.46■□□□□ 0.07
CHRNB3-201ENST00000289957 KIF20BQ96Q89 1820 aa15.45■□□□□ 0.06
CHRNB3-201ENST00000289957 PPP2R1AP30153 589 aa15.45■□□□□ 0.06
CHRNB3-201ENST00000289957 MORC1Q86VD1 984 aa15.45■□□□□ 0.06
CHRNB3-201ENST00000289957 PSME1Q06323 249 aa15.45■□□□□ 0.06
CHRNB3-201ENST00000289957 PIK3C2AO00443 1686 aa15.44■□□□□ 0.06
CHRNB3-201ENST00000289957 ZNF692Q9BU19 519 aaPredicted RBP15.44■□□□□ 0.06
CHRNB3-201ENST00000289957 MYBBP1AQ9BQG0 1328 aaKnown RBP15.43■□□□□ 0.06
CHRNB3-201ENST00000289957 NPC1L1Q9UHC9 1359 aa15.43■□□□□ 0.06
CHRNB3-201ENST00000289957 RALBP1Q15311 655 aa15.43■□□□□ 0.06
CHRNB3-201ENST00000289957 MRS2Q9HD23 443 aa15.43■□□□□ 0.06
CHRNB3-201ENST00000289957 ERICH6BQ5W0A0 696 aa15.42■□□□□ 0.06
CHRNB3-201ENST00000289957 LMOD2Q6P5Q4 547 aa15.41■□□□□ 0.06
CHRNB3-201ENST00000289957 KRT28Q7Z3Y7 464 aa15.41■□□□□ 0.06
CHRNB3-201ENST00000289957 RRS1Q15050 365 aaKnown RBP15.41■□□□□ 0.06
CHRNB3-201ENST00000289957 MARF1Q9Y4F3 1742 aaKnown RBP15.41■□□□□ 0.06
CHRNB3-201ENST00000289957 PIP4K2BP78356 416 aa15.4■□□□□ 0.06
CHRNB3-201ENST00000289957 ABTB2Q8N961 1025 aa15.4■□□□□ 0.06
CHRNB3-201ENST00000289957 TRPM3Q9HCF6 1732 aaPredicted RBP15.39■□□□□ 0.05
CHRNB3-201ENST00000289957 ANKRD26Q9UPS8 1709 aa15.39■□□□□ 0.05
CHRNB3-201ENST00000289957 NLRP6P59044 892 aa15.39■□□□□ 0.05
CHRNB3-201ENST00000289957 FAM9BQ8IZU0 186 aa15.39■□□□□ 0.05
CHRNB3-201ENST00000289957 EMILIN1Q9Y6C2 1016 aa15.39■□□□□ 0.05
CHRNB3-201ENST00000289957 OVOS2A0A0J9YW53 1432 aa15.39■□□□□ 0.05
CHRNB3-201ENST00000289957 OVOS2Q6IE36 1432 aa15.39■□□□□ 0.05
CHRNB3-201ENST00000289957 PXDNQ92626 1479 aa15.38■□□□□ 0.05
CHRNB3-201ENST00000289957 KIF1AQ12756 1690 aa15.38■□□□□ 0.05
CHRNB3-201ENST00000289957 PPM1GO15355 546 aaPredicted RBP15.38■□□□□ 0.05
CHRNB3-201ENST00000289957 MTHFSP49914 203 aa15.38■□□□□ 0.05
CHRNB3-201ENST00000289957 NLRP13Q86W25 1043 aa15.38■□□□□ 0.05
CHRNB3-201ENST00000289957 COG3Q96JB2 828 aa15.38■□□□□ 0.05
CHRNB3-201ENST00000289957 ROBO1Q9Y6N7 1651 aa15.37■□□□□ 0.05
CHRNB3-201ENST00000289957 CABLES1Q8TDN4 633 aa15.37■□□□□ 0.05
CHRNB3-201ENST00000289957 NSD2O96028 1365 aa15.37■□□□□ 0.05
CHRNB3-201ENST00000289957 POLKQ9UBT6 870 aa15.35■□□□□ 0.05
CHRNB3-201ENST00000289957 MAP2P11137 1827 aaKnown RBP15.35■□□□□ 0.05
CHRNB3-201ENST00000289957 TTC21AQ8NDW8 1320 aa15.35■□□□□ 0.05
CHRNB3-201ENST00000289957 NPHP3Q7Z494 1330 aa15.34■□□□□ 0.05
CHRNB3-201ENST00000289957 UBAP1LF5GYI3 381 aa15.34■□□□□ 0.05
CHRNB3-201ENST00000289957 HNRNPUQ00839 825 aaKnown RBP eCLIP15.34■□□□□ 0.05
CHRNB3-201ENST00000289957 CERKQ8TCT0 537 aa15.33■□□□□ 0.05
CHRNB3-201ENST00000289957 PNISRQ8TF01 805 aaKnown RBP15.33■□□□□ 0.05
CHRNB3-201ENST00000289957 ALS2Q96Q42 1657 aa15.33■□□□□ 0.04
CHRNB3-201ENST00000289957 BRD4O60885 1362 aaPredicted RBP15.33■□□□□ 0.04
CHRNB3-201ENST00000289957 ANP32EQ9BTT0 268 aa15.32■□□□□ 0.04
CHRNB3-201ENST00000289957 ZBED9Q6R2W3 1325 aa15.32■□□□□ 0.04
CHRNB3-201ENST00000289957 PEAK1Q9H792 1746 aa15.32■□□□□ 0.04
CHRNB3-201ENST00000289957 MED1Q15648 1581 aaPredicted RBP15.32■□□□□ 0.04
CHRNB3-201ENST00000289957 ZBTB7CA1YPR0 619 aa15.31■□□□□ 0.04
CHRNB3-201ENST00000289957 SOS2Q07890 1332 aaPredicted RBP15.31■□□□□ 0.04
CHRNB3-201ENST00000289957 USP31Q70CQ4 1352 aa15.31■□□□□ 0.04
CHRNB3-201ENST00000289957 NHSL1Q5SYE7 1610 aa15.31■□□□□ 0.04
CHRNB3-201ENST00000289957 MAP3K19Q56UN5 1328 aa15.31■□□□□ 0.04
CHRNB3-201ENST00000289957 SPATA31A3Q5VYP0 1347 aa15.31■□□□□ 0.04
CHRNB3-201ENST00000289957 TNS3Q68CZ2 1445 aa15.3■□□□□ 0.04
CHRNB3-201ENST00000289957 HSP90AB2PQ58FF8 381 aa15.29■□□□□ 0.04
CHRNB3-201ENST00000289957 SHPRHQ149N8 1683 aa15.29■□□□□ 0.04
CHRNB3-201ENST00000289957 ADAMTS8Q9UP79 889 aa15.28■□□□□ 0.04
CHRNB3-201ENST00000289957 COL3A1P02461 1466 aaPredicted RBP15.28■□□□□ 0.04
CHRNB3-201ENST00000289957 GCP02774 474 aa15.28■□□□□ 0.04
CHRNB3-201ENST00000289957 ZC3H6P61129 1189 aaKnown RBP15.28■□□□□ 0.04
CHRNB3-201ENST00000289957 NFAT5O94916 1531 aa15.28■□□□□ 0.04
CHRNB3-201ENST00000289957 TOM1O60784 492 aa15.27■□□□□ 0.04
CHRNB3-201ENST00000289957 SBNO1A3KN83 1393 aa15.27■□□□□ 0.03
CHRNB3-201ENST00000289957 USP54Q70EL1 1684 aa15.26■□□□□ 0.03
CHRNB3-201ENST00000289957 AATKQ6ZMQ8 1374 aa15.26■□□□□ 0.03
CHRNB3-201ENST00000289957 CCDC146Q8IYE0 955 aa15.26■□□□□ 0.03
CHRNB3-201ENST00000289957 USP19O94966 1318 aa15.26■□□□□ 0.03
CHRNB3-201ENST00000289957 RBM19Q9Y4C8 960 aaKnown RBP15.26■□□□□ 0.03
CHRNB3-201ENST00000289957 LTN1O94822 1766 aa15.25■□□□□ 0.03
CHRNB3-201ENST00000289957 CHRNA2Q15822 529 aa15.24■□□□□ 0.03
CHRNB3-201ENST00000289957 CRYBG1Q9Y4K1 1723 aa15.24■□□□□ 0.03
CHRNB3-201ENST00000289957 PNPLA6Q8IY17 1366 aa15.24■□□□□ 0.03
CHRNB3-201ENST00000289957 SMG6Q86US8 1419 aaKnown RBP15.24■□□□□ 0.03
CHRNB3-201ENST00000289957 AXIN2Q9Y2T1 843 aa15.24■□□□□ 0.03
CHRNB3-201ENST00000289957 SALL2Q9Y467 1007 aaPredicted RBP15.24■□□□□ 0.03
CHRNB3-201ENST00000289957 SLIT3O75094 1523 aa15.24■□□□□ 0.03
CHRNB3-201ENST00000289957 U2SURPO15042 1029 aaKnown RBP15.23■□□□□ 0.03
CHRNB3-201ENST00000289957 LTV1Q96GA3 475 aaPredicted RBP15.23■□□□□ 0.03
CHRNB3-201ENST00000289957 PHRF1Q9P1Y6 1649 aaKnown RBP15.23■□□□□ 0.03
CHRNB3-201ENST00000289957 PHLPP1O60346 1717 aa15.23■□□□□ 0.03
CHRNB3-201ENST00000289957 COL16A1Q07092 1604 aaPredicted RBP15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms