RNA–Protein interactions for RNA: ENST00000288025.3

TMED6-201, Transcript of transmembrane p24 trafficking protein 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMED6, Length 938 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED6-201ENST00000288025 METP08581 1390 aa13.2□□□□□ -0.3
TMED6-201ENST00000288025 NUTM2BA6NNL0 878 aaPredicted RBP13.2□□□□□ -0.3
TMED6-201ENST00000288025 NUTM2EB1AL46 878 aaPredicted RBP13.2□□□□□ -0.3
TMED6-201ENST00000288025 VGFO15240 615 aaPredicted RBP13.2□□□□□ -0.3
TMED6-201ENST00000288025 NUTM2AQ8IVF1 878 aaPredicted RBP13.2□□□□□ -0.3
TMED6-201ENST00000288025 PTCH1Q13635 1447 aa13.19□□□□□ -0.3
TMED6-201ENST00000288025 ZNF467Q7Z7K2 595 aaPredicted RBP13.18□□□□□ -0.3
TMED6-201ENST00000288025 CCDC144AA2RUR9 1427 aa13.17□□□□□ -0.3
TMED6-201ENST00000288025 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.17□□□□□ -0.3
TMED6-201ENST00000288025 SETD5Q9C0A6 1442 aa13.16□□□□□ -0.3
TMED6-201ENST00000288025 SNPHO15079 494 aa13.16□□□□□ -0.3
TMED6-201ENST00000288025 LRRC59Q96AG4 307 aaKnown RBP13.16□□□□□ -0.3
TMED6-201ENST00000288025 RPGRIP1LQ68CZ1 1315 aa13.15□□□□□ -0.3
TMED6-201ENST00000288025 IFT172Q9UG01 1749 aa13.15□□□□□ -0.3
TMED6-201ENST00000288025 CHRM1P11229 460 aaPredicted RBP13.14□□□□□ -0.31
TMED6-201ENST00000288025 CDC42BPGQ6DT37 1551 aa13.14□□□□□ -0.31
TMED6-201ENST00000288025 C1orf167Q5SNV9 1468 aa13.13□□□□□ -0.31
TMED6-201ENST00000288025 RXRBP28702 533 aa13.13□□□□□ -0.31
TMED6-201ENST00000288025 TMEM121BQ9BXQ6 578 aaPredicted RBP13.13□□□□□ -0.31
TMED6-201ENST00000288025 KNDC1Q76NI1 1749 aa13.13□□□□□ -0.31
TMED6-201ENST00000288025 LAMC1P11047 1609 aa13.13□□□□□ -0.31
TMED6-201ENST00000288025 AFF2P51816 1311 aa13.13□□□□□ -0.31
TMED6-201ENST00000288025 C8orf37Q96NL8 207 aa13.12□□□□□ -0.31
TMED6-201ENST00000288025 PNPLA6Q8IY17 1366 aa13.11□□□□□ -0.31
TMED6-201ENST00000288025 CIZ1Q9ULV3 898 aaPredicted RBP13.11□□□□□ -0.31
TMED6-201ENST00000288025 CDK12Q9NYV4 1490 aaPredicted RBP13.1□□□□□ -0.31
TMED6-201ENST00000288025 ROBO2Q9HCK4 1378 aa13.1□□□□□ -0.31
TMED6-201ENST00000288025 GOLGA2Q08379 1002 aa13.1□□□□□ -0.31
TMED6-201ENST00000288025 MKRN3Q13064 507 aaKnown RBP13.1□□□□□ -0.31
TMED6-201ENST00000288025 PRAG1Q86YV5 1406 aa13.1□□□□□ -0.31
TMED6-201ENST00000288025 MARF1Q9Y4F3 1742 aaKnown RBP13.1□□□□□ -0.31
TMED6-201ENST00000288025 ANKRD30BQ9BXX2 1392 aa13.09□□□□□ -0.31
TMED6-201ENST00000288025 KIF1AQ12756 1690 aa13.09□□□□□ -0.31
TMED6-201ENST00000288025 DDX17Q92841 729 aaKnown RBP13.09□□□□□ -0.31
TMED6-201ENST00000288025 ACIN1Q9UKV3 1341 aaKnown RBP13.09□□□□□ -0.31
TMED6-201ENST00000288025 ADAMTS2O95450 1211 aa13.08□□□□□ -0.32
TMED6-201ENST00000288025 PDCD7Q8N8D1 485 aaKnown RBP13.08□□□□□ -0.32
TMED6-201ENST00000288025 L3MBTL3Q96JM7 780 aaPredicted RBP13.08□□□□□ -0.32
TMED6-201ENST00000288025 COL22A1Q8NFW1 1626 aaPredicted RBP13.08□□□□□ -0.32
TMED6-201ENST00000288025 RGL3Q3MIN7 710 aa13.07□□□□□ -0.32
TMED6-201ENST00000288025 NGLY1Q96IV0 654 aa13.07□□□□□ -0.32
TMED6-201ENST00000288025 NPHP3Q7Z494 1330 aa13.07□□□□□ -0.32
TMED6-201ENST00000288025 LRPPRCP42704 1394 aaKnown RBP13.07□□□□□ -0.32
TMED6-201ENST00000288025 FMN2Q9NZ56 1722 aa13.06□□□□□ -0.32
TMED6-201ENST00000288025 ESCO1Q5FWF5 840 aa13.06□□□□□ -0.32
TMED6-201ENST00000288025 PSEN1P49768 467 aa13.05□□□□□ -0.32
TMED6-201ENST00000288025 ORAI2Q96SN7 254 aa13.05□□□□□ -0.32
TMED6-201ENST00000288025 STK26Q9P289 416 aa13.05□□□□□ -0.32
TMED6-201ENST00000288025 RBM6P78332 1123 aaKnown RBP13.04□□□□□ -0.32
TMED6-201ENST00000288025 QTRT2Q9H974 415 aaKnown RBP13.04□□□□□ -0.32
TMED6-201ENST00000288025 RGS12O14924 1447 aa13.04□□□□□ -0.32
TMED6-201ENST00000288025 C3orf67Q6ZVT6 689 aa13.03□□□□□ -0.32
TMED6-201ENST00000288025 MPHOSPH9Q99550 1183 aa13.03□□□□□ -0.32
TMED6-201ENST00000288025 SOS2Q07890 1332 aaPredicted RBP13.03□□□□□ -0.32
TMED6-201ENST00000288025 TECPR2O15040 1411 aa13.03□□□□□ -0.32
TMED6-201ENST00000288025 PIK3C2GO75747 1445 aa13.03□□□□□ -0.32
TMED6-201ENST00000288025 HAP1P54257 671 aaPredicted RBP13.02□□□□□ -0.33
TMED6-201ENST00000288025 UPF1Q92900 1129 aaKnown RBP eCLIP13.02□□□□□ -0.33
TMED6-201ENST00000288025 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.02□□□□□ -0.33
TMED6-201ENST00000288025 USP21Q9UK80 565 aa13.02□□□□□ -0.33
TMED6-201ENST00000288025 ADGRF5Q8IZF2 1346 aa13.02□□□□□ -0.33
TMED6-201ENST00000288025 SPATA31E1Q6ZUB1 1445 aa13.02□□□□□ -0.33
TMED6-201ENST00000288025 RGPD8O14715 1765 aaPredicted RBP13.02□□□□□ -0.33
TMED6-201ENST00000288025 NUTM2FA1L443 756 aa13.01□□□□□ -0.33
TMED6-201ENST00000288025 TRPC5Q9UL62 973 aaPredicted RBP13.01□□□□□ -0.33
TMED6-201ENST00000288025 ATAD2Q6PL18 1390 aa13.01□□□□□ -0.33
TMED6-201ENST00000288025 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.01□□□□□ -0.33
TMED6-201ENST00000288025 MYOM2P54296 1465 aa13□□□□□ -0.33
TMED6-201ENST00000288025 PXDNQ92626 1479 aa13□□□□□ -0.33
TMED6-201ENST00000288025 YTHDC2Q9H6S0 1430 aaKnown RBP13□□□□□ -0.33
TMED6-201ENST00000288025 DHX57Q6P158 1386 aaKnown RBP12.98□□□□□ -0.33
TMED6-201ENST00000288025 ABCC11Q96J66 1382 aa12.98□□□□□ -0.33
TMED6-201ENST00000288025 FOXO3O43524 673 aa12.98□□□□□ -0.33
TMED6-201ENST00000288025 XPCQ01831 940 aaPredicted RBP12.98□□□□□ -0.33
TMED6-201ENST00000288025 PDAP1Q13442 181 aaKnown RBP12.98□□□□□ -0.33
TMED6-201ENST00000288025 USP32Q8NFA0 1604 aa12.98□□□□□ -0.33
TMED6-201ENST00000288025 TMEM132EQ6IEE7 984 aa12.97□□□□□ -0.33
TMED6-201ENST00000288025 WAPLQ7Z5K2 1190 aa12.97□□□□□ -0.33
TMED6-201ENST00000288025 MARVELD3Q96A59 401 aa12.96□□□□□ -0.33
TMED6-201ENST00000288025 ABCA3Q99758 1704 aa12.96□□□□□ -0.34
TMED6-201ENST00000288025 PLCH1Q4KWH8 1693 aa12.96□□□□□ -0.34
TMED6-201ENST00000288025 AMER1Q5JTC6 1135 aaPredicted RBP12.95□□□□□ -0.34
TMED6-201ENST00000288025 RTN4Q9NQC3 1192 aaKnown RBP12.95□□□□□ -0.34
TMED6-201ENST00000288025 POGKQ9P215 609 aa12.95□□□□□ -0.34
TMED6-201ENST00000288025 ITSN1Q15811 1721 aa12.95□□□□□ -0.34
TMED6-201ENST00000288025 ATRNO75882 1429 aa12.95□□□□□ -0.34
TMED6-201ENST00000288025 PLEKHH1Q9ULM0 1364 aa12.94□□□□□ -0.34
TMED6-201ENST00000288025 PSME1Q06323 249 aa12.94□□□□□ -0.34
TMED6-201ENST00000288025 LMOD2Q6P5Q4 547 aa12.94□□□□□ -0.34
TMED6-201ENST00000288025 TNS3Q68CZ2 1445 aa12.94□□□□□ -0.34
TMED6-201ENST00000288025 EIF3AQ14152 1382 aaKnown RBP12.94□□□□□ -0.34
TMED6-201ENST00000288025 RAB3GAP2Q9H2M9 1393 aa12.94□□□□□ -0.34
TMED6-201ENST00000288025 NWD2Q9ULI1 1742 aa12.93□□□□□ -0.34
TMED6-201ENST00000288025 NRXN1Q9ULB1 1477 aa12.93□□□□□ -0.34
TMED6-201ENST00000288025 SAFB2Q14151 953 aaKnown RBP eCLIP12.93□□□□□ -0.34
TMED6-201ENST00000288025 ADGRB2O60241 1585 aa12.93□□□□□ -0.34
TMED6-201ENST00000288025 DLC1Q96QB1 1528 aa12.93□□□□□ -0.34
TMED6-201ENST00000288025 ECM2O94769 699 aaPredicted RBP12.92□□□□□ -0.34
TMED6-201ENST00000288025 SPNS2Q8IVW8 549 aa12.92□□□□□ -0.34
TMED6-201ENST00000288025 FNBP4Q8N3X1 1017 aaPredicted RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms