RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 SLC52A1Q9NWF4 448 aa16.54■□□□□ 0.24
SCAF4-201ENST00000286835 SAMD9LQ8IVG5 1584 aa16.54■□□□□ 0.24
SCAF4-201ENST00000286835 PTMSP20962 102 aa16.54■□□□□ 0.24
SCAF4-201ENST00000286835 TXNDC2Q86VQ3 553 aa16.53■□□□□ 0.24
SCAF4-201ENST00000286835 MPNDQ8N594 471 aa16.53■□□□□ 0.24
SCAF4-201ENST00000286835 SLC26A8Q96RN1 970 aa16.53■□□□□ 0.24
SCAF4-201ENST00000286835 DUOX2Q9NRD8 1548 aa16.53■□□□□ 0.24
SCAF4-201ENST00000286835 CLCN1P35523 988 aa16.53■□□□□ 0.24
SCAF4-201ENST00000286835 IDI1Q13907 227 aa16.53■□□□□ 0.24
SCAF4-201ENST00000286835 PRAM1Q96QH2 718 aa16.53■□□□□ 0.24
SCAF4-201ENST00000286835 CEBPAP49715 358 aaPredicted RBP16.53■□□□□ 0.24
SCAF4-201ENST00000286835 R3HCC1Q9Y3T6 440 aaKnown RBP16.53■□□□□ 0.24
SCAF4-201ENST00000286835 PRPF40AO75400 957 aaKnown RBP16.52■□□□□ 0.24
SCAF4-201ENST00000286835 CDC45O75419 566 aa16.52■□□□□ 0.24
SCAF4-201ENST00000286835 LTV1Q96GA3 475 aaPredicted RBP16.52■□□□□ 0.23
SCAF4-201ENST00000286835 CROCC2H7BZ55 1655 aa16.52■□□□□ 0.23
SCAF4-201ENST00000286835 KIAA1211Q6ZU35 1233 aa16.52■□□□□ 0.23
SCAF4-201ENST00000286835 ST18O60284 1047 aa16.51■□□□□ 0.23
SCAF4-201ENST00000286835 TBC1D9Q6ZT07 1266 aa16.51■□□□□ 0.23
SCAF4-201ENST00000286835 HDAC1Q13547 482 aaPredicted RBP16.51■□□□□ 0.23
SCAF4-201ENST00000286835 CABP1Q9NZU7 370 aa16.51■□□□□ 0.23
SCAF4-201ENST00000286835 NPC1L1Q9UHC9 1359 aa16.5■□□□□ 0.23
SCAF4-201ENST00000286835 TRIM6-TRIM34B2RNG4 842 aa16.5■□□□□ 0.23
SCAF4-201ENST00000286835 CT47B1P0C2W7 299 aaPredicted RBP16.49■□□□□ 0.23
SCAF4-201ENST00000286835 DCTN1Q14203 1278 aa16.49■□□□□ 0.23
SCAF4-201ENST00000286835 TWISTNBQ3B726 338 aaPredicted RBP16.49■□□□□ 0.23
SCAF4-201ENST00000286835 NUCB1Q02818 461 aa16.48■□□□□ 0.23
SCAF4-201ENST00000286835 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.48■□□□□ 0.23
SCAF4-201ENST00000286835 PKNOX2Q96KN3 472 aa16.48■□□□□ 0.23
SCAF4-201ENST00000286835 GCC1Q96CN9 775 aa16.48■□□□□ 0.23
SCAF4-201ENST00000286835 ABCC2Q92887 1545 aa16.48■□□□□ 0.23
SCAF4-201ENST00000286835 ARHGEF5Q12774 1597 aa16.48■□□□□ 0.23
SCAF4-201ENST00000286835 SMC5Q8IY18 1101 aa16.48■□□□□ 0.23
SCAF4-201ENST00000286835 GAS2L2Q8NHY3 880 aa16.48■□□□□ 0.23
SCAF4-201ENST00000286835 RILPL2Q969X0 211 aa16.48■□□□□ 0.23
SCAF4-201ENST00000286835 ZBTB40Q9NUA8 1239 aa16.48■□□□□ 0.23
SCAF4-201ENST00000286835 ADCY10Q96PN6 1610 aa16.47■□□□□ 0.23
SCAF4-201ENST00000286835 GAS2L3Q86XJ1 694 aa16.47■□□□□ 0.23
SCAF4-201ENST00000286835 SMARCA5O60264 1052 aaPredicted RBP16.47■□□□□ 0.23
SCAF4-201ENST00000286835 CIZ1Q9ULV3 898 aaPredicted RBP16.47■□□□□ 0.23
SCAF4-201ENST00000286835 CCDC27Q2M243 656 aa16.46■□□□□ 0.23
SCAF4-201ENST00000286835 NECTIN2Q92692 538 aa16.46■□□□□ 0.23
SCAF4-201ENST00000286835 E9PCH4 1651 aa16.46■□□□□ 0.23
SCAF4-201ENST00000286835 GNAI1P63096 354 aa16.46■□□□□ 0.23
SCAF4-201ENST00000286835 ABCA8O94911 1581 aa16.46■□□□□ 0.23
SCAF4-201ENST00000286835 C14orf93Q9H972 538 aaKnown RBP16.46■□□□□ 0.23
SCAF4-201ENST00000286835 MAST1Q9Y2H9 1570 aa16.46■□□□□ 0.22
SCAF4-201ENST00000286835 CCDC173Q0VFZ6 552 aa16.45■□□□□ 0.22
SCAF4-201ENST00000286835 NUCB2P80303 420 aa16.45■□□□□ 0.22
SCAF4-201ENST00000286835 API5Q9BZZ5 524 aaKnown RBP16.45■□□□□ 0.22
SCAF4-201ENST00000286835 AMPHP49418 695 aa16.45■□□□□ 0.22
SCAF4-201ENST00000286835 BMP2KLQ5H9B9 411 aa16.45■□□□□ 0.22
SCAF4-201ENST00000286835 TSPYL6Q8N831 410 aa16.45■□□□□ 0.22
SCAF4-201ENST00000286835 TRIM35Q9UPQ4 493 aa16.45■□□□□ 0.22
SCAF4-201ENST00000286835 INTS3Q68E01 1043 aaKnown RBP16.45■□□□□ 0.22
SCAF4-201ENST00000286835 ERVK-7P63135 1459 aa16.44■□□□□ 0.22
SCAF4-201ENST00000286835 CFAP65Q6ZU64 1925 aaKnown RBP16.44■□□□□ 0.22
SCAF4-201ENST00000286835 CD2BP2O95400 341 aaKnown RBP16.44■□□□□ 0.22
SCAF4-201ENST00000286835 C16orf71Q8IYS4 520 aaPredicted RBP16.44■□□□□ 0.22
SCAF4-201ENST00000286835 FSD2A1L4K1 749 aa16.44■□□□□ 0.22
SCAF4-201ENST00000286835 RRP9O43818 475 aaKnown RBP16.44■□□□□ 0.22
SCAF4-201ENST00000286835 BAG4O95429 457 aaKnown RBP16.44■□□□□ 0.22
SCAF4-201ENST00000286835 COG3Q96JB2 828 aa16.44■□□□□ 0.22
SCAF4-201ENST00000286835 NUTM2GQ5VZR2 741 aa16.43■□□□□ 0.22
SCAF4-201ENST00000286835 RBM27Q9P2N5 1060 aaKnown RBP16.43■□□□□ 0.22
SCAF4-201ENST00000286835 NEK4P51957 841 aa16.43■□□□□ 0.22
SCAF4-201ENST00000286835 FAM83GA6ND36 823 aa16.43■□□□□ 0.22
SCAF4-201ENST00000286835 CDK19Q9BWU1 502 aa16.43■□□□□ 0.22
SCAF4-201ENST00000286835 ISY1Q9ULR0 285 aaKnown RBP16.43■□□□□ 0.22
SCAF4-201ENST00000286835 UGGT1Q9NYU2 1555 aa16.43■□□□□ 0.22
SCAF4-201ENST00000286835 FYB1O15117 783 aa16.42■□□□□ 0.22
SCAF4-201ENST00000286835 PTPRTO14522 1441 aa16.42■□□□□ 0.22
SCAF4-201ENST00000286835 RRS1Q15050 365 aaKnown RBP16.42■□□□□ 0.22
SCAF4-201ENST00000286835 RABEP1Q15276 862 aa16.42■□□□□ 0.22
SCAF4-201ENST00000286835 ATP10AO60312 1499 aa16.42■□□□□ 0.22
SCAF4-201ENST00000286835 MCCP23508 829 aa16.42■□□□□ 0.22
SCAF4-201ENST00000286835 XPCQ01831 940 aaPredicted RBP16.42■□□□□ 0.22
SCAF4-201ENST00000286835 RAB3GAP1Q15042 981 aa16.42■□□□□ 0.22
SCAF4-201ENST00000286835 ZMYND15Q9H091 742 aa16.42■□□□□ 0.22
SCAF4-201ENST00000286835 ANO2Q9NQ90 1003 aa16.42■□□□□ 0.22
SCAF4-201ENST00000286835 WAPLQ7Z5K2 1190 aa16.41■□□□□ 0.22
SCAF4-201ENST00000286835 ZSCAN30Q86W11 494 aa16.41■□□□□ 0.22
SCAF4-201ENST00000286835 RTF1Q92541 710 aaKnown RBP16.41■□□□□ 0.22
SCAF4-201ENST00000286835 EMILIN1Q9Y6C2 1016 aa16.41■□□□□ 0.22
SCAF4-201ENST00000286835 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.41■□□□□ 0.221e-23■■■■□ 23.1
SCAF4-201ENST00000286835 SYNMO15061 1565 aa16.41■□□□□ 0.22
SCAF4-201ENST00000286835 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.41■□□□□ 0.22
SCAF4-201ENST00000286835 TTC37Q6PGP7 1564 aa16.4■□□□□ 0.22
SCAF4-201ENST00000286835 REC8O95072 547 aa16.4■□□□□ 0.22
SCAF4-201ENST00000286835 ATAD2Q6PL18 1390 aa16.4■□□□□ 0.22
SCAF4-201ENST00000286835 SYCE3A1L190 88 aa16.4■□□□□ 0.22
SCAF4-201ENST00000286835 CSB-PGBD3P0DP91 1061 aa16.4■□□□□ 0.22
SCAF4-201ENST00000286835 CFAP44Q96MT7 982 aa16.4■□□□□ 0.22
SCAF4-201ENST00000286835 FCHSD2O94868 740 aa16.39■□□□□ 0.21
SCAF4-201ENST00000286835 LMOD3Q0VAK6 560 aa16.39■□□□□ 0.21
SCAF4-201ENST00000286835 SNX21Q969T3 373 aa16.39■□□□□ 0.21
SCAF4-201ENST00000286835 PHACTR3Q96KR7 559 aa16.39■□□□□ 0.21
SCAF4-201ENST00000286835 RBM25P49756 843 aaKnown RBP16.39■□□□□ 0.21
SCAF4-201ENST00000286835 HMMRO75330 724 aa16.38■□□□□ 0.21
SCAF4-201ENST00000286835 ALDH1L2Q3SY69 923 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 111.5 ms