RNA–Protein interactions for RNA: ENST00000285398.6

ERCC3-201, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC3, Length 2,750 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-201ENST00000285398 PLIN1O60240 522 aa13.56□□□□□ -0.24
ERCC3-201ENST00000285398 SKAP1Q86WV1 359 aa13.56□□□□□ -0.24
ERCC3-201ENST00000285398 SBNO2Q9Y2G9 1366 aa13.56□□□□□ -0.24
ERCC3-201ENST00000285398 CARD14Q9BXL6 1004 aa13.55□□□□□ -0.24
ERCC3-201ENST00000285398 HOMEZQ8IX15 550 aa13.55□□□□□ -0.24
ERCC3-201ENST00000285398 TAOK2Q9UL54 1235 aa13.55□□□□□ -0.24
ERCC3-201ENST00000285398 NPHP4O75161 1426 aaPredicted RBP13.55□□□□□ -0.24
ERCC3-201ENST00000285398 C8orf34Q49A92 452 aa13.54□□□□□ -0.24
ERCC3-201ENST00000285398 CABP1Q9NZU7 370 aa13.54□□□□□ -0.24
ERCC3-201ENST00000285398 LMTK3Q96Q04 1460 aa13.53□□□□□ -0.24
ERCC3-201ENST00000285398 L1TD1Q5T7N2 865 aaKnown RBP13.53□□□□□ -0.24
ERCC3-201ENST00000285398 KNSTRNQ9Y448 316 aa13.52□□□□□ -0.24
ERCC3-201ENST00000285398 WASLO00401 505 aaPredicted RBP13.52□□□□□ -0.25
ERCC3-201ENST00000285398 TNNT2P45379 298 aaPredicted RBP13.51□□□□□ -0.25
ERCC3-201ENST00000285398 TECPR2O15040 1411 aa13.5□□□□□ -0.25
ERCC3-201ENST00000285398 C14orf37Q86TY3 774 aa13.5□□□□□ -0.25
ERCC3-201ENST00000285398 DLC1Q96QB1 1528 aa13.5□□□□□ -0.25
ERCC3-201ENST00000285398 PRR36Q9H6K5 1346 aa13.49□□□□□ -0.25
ERCC3-201ENST00000285398 MYOM1P52179 1685 aa13.49□□□□□ -0.25
ERCC3-201ENST00000285398 C20orf194Q5TEA3 1177 aa13.49□□□□□ -0.25
ERCC3-201ENST00000285398 NUDT16Q96DE0 195 aaKnown RBP13.49□□□□□ -0.25
ERCC3-201ENST00000285398 FAM135BQ49AJ0 1406 aa13.48□□□□□ -0.25
ERCC3-201ENST00000285398 PMFBP1Q8TBY8 1022 aa13.48□□□□□ -0.25
ERCC3-201ENST00000285398 RRAGDQ9NQL2 400 aaPredicted RBP13.48□□□□□ -0.25
ERCC3-201ENST00000285398 CPS1P31327 1500 aa13.48□□□□□ -0.25
ERCC3-201ENST00000285398 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.47□□□□□ -0.25
ERCC3-201ENST00000285398 DIP2AQ14689 1571 aa13.47□□□□□ -0.25
ERCC3-201ENST00000285398 NSD3Q9BZ95 1437 aa13.47□□□□□ -0.25
ERCC3-201ENST00000285398 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.47□□□□□ -0.25
ERCC3-201ENST00000285398 SIRT1Q96EB6 747 aa13.47□□□□□ -0.25
ERCC3-201ENST00000285398 A0A1W2PP64 1363 aa13.47□□□□□ -0.25
ERCC3-201ENST00000285398 KNDC1Q76NI1 1749 aa13.46□□□□□ -0.25
ERCC3-201ENST00000285398 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.46□□□□□ -0.26
ERCC3-201ENST00000285398 BECN1Q14457 450 aa13.45□□□□□ -0.26
ERCC3-201ENST00000285398 PROSER2Q86WR7 435 aaPredicted RBP13.45□□□□□ -0.26
ERCC3-201ENST00000285398 PIK3R4Q99570 1358 aa13.45□□□□□ -0.26
ERCC3-201ENST00000285398 GGNBP2Q9H3C7 697 aa13.44□□□□□ -0.26
ERCC3-201ENST00000285398 ATAD2Q6PL18 1390 aa13.44□□□□□ -0.26
ERCC3-201ENST00000285398 FBLN1P23142 703 aa13.44□□□□□ -0.26
ERCC3-201ENST00000285398 CCDC61Q9Y6R9 512 aa13.44□□□□□ -0.26
ERCC3-201ENST00000285398 XRN1Q8IZH2 1706 aaKnown RBP13.44□□□□□ -0.26
ERCC3-201ENST00000285398 ZNF335Q9H4Z2 1342 aaPredicted RBP13.44□□□□□ -0.26
ERCC3-201ENST00000285398 PTCH1Q13635 1447 aa13.43□□□□□ -0.26
ERCC3-201ENST00000285398 PPIP5K1Q6PFW1 1433 aa13.43□□□□□ -0.26
ERCC3-201ENST00000285398 VIRMAQ69YN4 1812 aaKnown RBP13.43□□□□□ -0.26
ERCC3-201ENST00000285398 CHD2O14647 1828 aaKnown RBP13.43□□□□□ -0.26
ERCC3-201ENST00000285398 RRP9O43818 475 aaKnown RBP13.43□□□□□ -0.26
ERCC3-201ENST00000285398 PNNQ9H307 717 aaKnown RBP13.43□□□□□ -0.26
ERCC3-201ENST00000285398 RGS3P49796 1198 aa13.43□□□□□ -0.26
ERCC3-201ENST00000285398 DUSP27Q5VZP5 1158 aa13.43□□□□□ -0.26
ERCC3-201ENST00000285398 STRCQ7RTU9 1775 aa13.42□□□□□ -0.26
ERCC3-201ENST00000285398 HSP90AA2PQ14568 343 aaPredicted RBP13.42□□□□□ -0.26
ERCC3-201ENST00000285398 VSIG10Q8N0Z9 540 aa13.42□□□□□ -0.26
ERCC3-201ENST00000285398 ZRANB1Q9UGI0 708 aa13.42□□□□□ -0.26
ERCC3-201ENST00000285398 ANKRD36BQ8N2N9 1353 aa13.42□□□□□ -0.26
ERCC3-201ENST00000285398 CD163L1Q9NR16 1453 aa13.42□□□□□ -0.26
ERCC3-201ENST00000285398 NAP1L5Q96NT1 182 aaPredicted RBP13.42□□□□□ -0.26
ERCC3-201ENST00000285398 TERF2IPQ9NYB0 399 aa13.42□□□□□ -0.26
ERCC3-201ENST00000285398 HSP90AA1P07900 732 aaKnown RBP13.41□□□□□ -0.26
ERCC3-201ENST00000285398 ZMYND15Q9H091 742 aa13.41□□□□□ -0.26
ERCC3-201ENST00000285398 ZNF521Q96K83 1311 aa13.41□□□□□ -0.26
ERCC3-201ENST00000285398 CLCN1P35523 988 aa13.41□□□□□ -0.26
ERCC3-201ENST00000285398 ATP7BP35670 1465 aa13.4□□□□□ -0.26
ERCC3-201ENST00000285398 HDGFL2Q7Z4V5 671 aaPredicted RBP13.4□□□□□ -0.26
ERCC3-201ENST00000285398 PUS7Q96PZ0 661 aaKnown RBP13.4□□□□□ -0.26
ERCC3-201ENST00000285398 ACEP12821 1306 aa13.4□□□□□ -0.26
ERCC3-201ENST00000285398 ADAMTS8Q9UP79 889 aa13.39□□□□□ -0.27
ERCC3-201ENST00000285398 TMEM94Q12767 1356 aa13.39□□□□□ -0.27
ERCC3-201ENST00000285398 FYB1O15117 783 aa13.39□□□□□ -0.27
ERCC3-201ENST00000285398 MORC1Q86VD1 984 aa13.39□□□□□ -0.27
ERCC3-201ENST00000285398 NME9Q86XW9 330 aa13.39□□□□□ -0.27
ERCC3-201ENST00000285398 CGNL1Q0VF96 1302 aa13.39□□□□□ -0.27
ERCC3-201ENST00000285398 GOLGA6L3A6NEY3 463 aa13.38□□□□□ -0.27
ERCC3-201ENST00000285398 PPP2R1AP30153 589 aa13.38□□□□□ -0.27
ERCC3-201ENST00000285398 XPCQ01831 940 aaPredicted RBP13.38□□□□□ -0.27
ERCC3-201ENST00000285398 SOX12O15370 315 aa13.38□□□□□ -0.27
ERCC3-201ENST00000285398 ORAI2Q96SN7 254 aa13.38□□□□□ -0.27
ERCC3-201ENST00000285398 ESCO1Q5FWF5 840 aa13.37□□□□□ -0.27
ERCC3-201ENST00000285398 NGDNQ8NEJ9 315 aaKnown RBP13.37□□□□□ -0.27
ERCC3-201ENST00000285398 NKTRP30414 1462 aaKnown RBP13.37□□□□□ -0.27
ERCC3-201ENST00000285398 GOLGA2Q08379 1002 aa13.37□□□□□ -0.27
ERCC3-201ENST00000285398 NUTM2GQ5VZR2 741 aa13.37□□□□□ -0.27
ERCC3-201ENST00000285398 USP19O94966 1318 aa13.37□□□□□ -0.27
ERCC3-201ENST00000285398 STRCP1A6NGW2 1772 aa13.36□□□□□ -0.27
ERCC3-201ENST00000285398 DDX17Q92841 729 aaKnown RBP13.36□□□□□ -0.27
ERCC3-201ENST00000285398 SLKQ9H2G2 1235 aaPredicted RBP13.36□□□□□ -0.27
ERCC3-201ENST00000285398 XRCC6P12956 609 aaKnown RBP eCLIP13.35□□□□□ -0.27
ERCC3-201ENST00000285398 PDIA4P13667 645 aaKnown RBP13.35□□□□□ -0.27
ERCC3-201ENST00000285398 RGPD8O14715 1765 aaPredicted RBP13.35□□□□□ -0.27
ERCC3-201ENST00000285398 NALCNQ8IZF0 1738 aa13.35□□□□□ -0.27
ERCC3-201ENST00000285398 ADGRB2O60241 1585 aa13.35□□□□□ -0.27
ERCC3-201ENST00000285398 MAPK8IP3Q9UPT6 1336 aa13.35□□□□□ -0.27
ERCC3-201ENST00000285398 TPRNQ4KMQ1 711 aa13.35□□□□□ -0.27
ERCC3-201ENST00000285398 FSD2A1L4K1 749 aa13.34□□□□□ -0.27
ERCC3-201ENST00000285398 FOXO3O43524 673 aa13.34□□□□□ -0.27
ERCC3-201ENST00000285398 ADGRL3Q9HAR2 1447 aa13.34□□□□□ -0.27
ERCC3-201ENST00000285398 NINLQ9Y2I6 1382 aa13.34□□□□□ -0.27
ERCC3-201ENST00000285398 SLFN5Q08AF3 891 aa13.34□□□□□ -0.27
ERCC3-201ENST00000285398 WDR43Q15061 677 aaKnown RBP eCLIP13.34□□□□□ -0.27
ERCC3-201ENST00000285398 ANTXR1Q9H6X2 564 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms