RNA–Protein interactions for RNA: ENST00000283415.3

LPCAT1-201, Transcript of lysophosphatidylcholine acyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPCAT1, Length 3,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1-201ENST00000283415 GZF1Q9H116 711 aaPredicted RBP17.65■□□□□ 0.42
LPCAT1-201ENST00000283415 ARHGEF40Q8TER5 1519 aa17.65■□□□□ 0.42
LPCAT1-201ENST00000283415 C8orf34Q49A92 452 aa17.65■□□□□ 0.42
LPCAT1-201ENST00000283415 YEATS2Q9ULM3 1422 aa17.65■□□□□ 0.42
LPCAT1-201ENST00000283415 ZMYM3Q14202 1370 aa17.64■□□□□ 0.41
LPCAT1-201ENST00000283415 WWC1Q8IX03 1113 aa17.64■□□□□ 0.41
LPCAT1-201ENST00000283415 ANO8Q9HCE9 1232 aaPredicted RBP17.64■□□□□ 0.41
LPCAT1-201ENST00000283415 MTHFSP49914 203 aa17.61■□□□□ 0.41
LPCAT1-201ENST00000283415 PNPLA6Q8IY17 1366 aa17.61■□□□□ 0.41
LPCAT1-201ENST00000283415 PDE3AQ14432 1141 aa17.6■□□□□ 0.41
LPCAT1-201ENST00000283415 ITPRIPQ8IWB1 547 aa17.6■□□□□ 0.41
LPCAT1-201ENST00000283415 TPRNQ4KMQ1 711 aa17.6■□□□□ 0.41
LPCAT1-201ENST00000283415 MON2Q7Z3U7 1717 aa17.59■□□□□ 0.41
LPCAT1-201ENST00000283415 OSCARQ8IYS5 282 aa17.59■□□□□ 0.41
LPCAT1-201ENST00000283415 BRPF3Q9ULD4 1205 aa17.59■□□□□ 0.41
LPCAT1-201ENST00000283415 AKAP12Q02952 1782 aa17.58■□□□□ 0.41
LPCAT1-201ENST00000283415 SMC4Q9NTJ3 1288 aa17.58■□□□□ 0.41
LPCAT1-201ENST00000283415 WDR63Q8IWG1 891 aa17.57■□□□□ 0.4
LPCAT1-201ENST00000283415 PLEKHF1Q96S99 279 aa17.57■□□□□ 0.4
LPCAT1-201ENST00000283415 A0A1W2PP64 1363 aa17.57■□□□□ 0.4
LPCAT1-201ENST00000283415 FBLN1P23142 703 aa17.56■□□□□ 0.4
LPCAT1-201ENST00000283415 USP19O94966 1318 aa17.56■□□□□ 0.4
LPCAT1-201ENST00000283415 BECN1Q14457 450 aa17.55■□□□□ 0.4
LPCAT1-201ENST00000283415 RUNDC1Q96C34 613 aa17.55■□□□□ 0.4
LPCAT1-201ENST00000283415 TCP11L2Q8N4U5 519 aa17.55■□□□□ 0.4
LPCAT1-201ENST00000283415 TSR2Q969E8 191 aaKnown RBP17.55■□□□□ 0.4
LPCAT1-201ENST00000283415 YTHDC2Q9H6S0 1430 aaKnown RBP17.55■□□□□ 0.4
LPCAT1-201ENST00000283415 HMOX1P09601 288 aa17.54■□□□□ 0.4
LPCAT1-201ENST00000283415 NRKQ7Z2Y5 1582 aa17.53■□□□□ 0.4
LPCAT1-201ENST00000283415 C3P01024 1663 aa17.53■□□□□ 0.4
LPCAT1-201ENST00000283415 LMOD2Q6P5Q4 547 aa17.53■□□□□ 0.4
LPCAT1-201ENST00000283415 SLC52A1Q9NWF4 448 aa17.53■□□□□ 0.4
LPCAT1-201ENST00000283415 VGFO15240 615 aaPredicted RBP17.53■□□□□ 0.4
LPCAT1-201ENST00000283415 IDI1Q13907 227 aa17.53■□□□□ 0.4
LPCAT1-201ENST00000283415 CGNL1Q0VF96 1302 aa17.53■□□□□ 0.4
LPCAT1-201ENST00000283415 IGHDP01880 384 aa17.53■□□□□ 0.4
LPCAT1-201ENST00000283415 AAMPQ13685 434 aa17.52■□□□□ 0.4
LPCAT1-201ENST00000283415 NFKBIBQ15653 356 aa17.52■□□□□ 0.4
LPCAT1-201ENST00000283415 TOPAZ1Q8N9V7 1692 aa17.52■□□□□ 0.4
LPCAT1-201ENST00000283415 RARSP54136 660 aaKnown RBP17.52■□□□□ 0.4
LPCAT1-201ENST00000283415 EVC2Q86UK5 1308 aa17.52■□□□□ 0.4
LPCAT1-201ENST00000283415 A2ML1A8K2U0 1454 aa17.52■□□□□ 0.39
LPCAT1-201ENST00000283415 MFAP1P55081 439 aaKnown RBP17.52■□□□□ 0.39
LPCAT1-201ENST00000283415 FOXD4L1Q9NU39 408 aa17.51■□□□□ 0.39
LPCAT1-201ENST00000283415 ATP7BP35670 1465 aa17.51■□□□□ 0.39
LPCAT1-201ENST00000283415 MAP2P11137 1827 aaKnown RBP17.51■□□□□ 0.39
LPCAT1-201ENST00000283415 FAM161AQ3B820 660 aa17.5■□□□□ 0.39
LPCAT1-201ENST00000283415 KIF13AQ9H1H9 1805 aa17.5■□□□□ 0.39
LPCAT1-201ENST00000283415 PPIP5K1Q6PFW1 1433 aa17.5■□□□□ 0.39
LPCAT1-201ENST00000283415 FRAT2O75474 233 aaPredicted RBP17.49■□□□□ 0.39
LPCAT1-201ENST00000283415 DLG5Q8TDM6 1919 aa17.49■□□□□ 0.39
LPCAT1-201ENST00000283415 LRRC7Q96NW7 1537 aa17.49■□□□□ 0.39
LPCAT1-201ENST00000283415 GSE1Q14687 1217 aa17.49■□□□□ 0.39
LPCAT1-201ENST00000283415 CPS1P31327 1500 aa17.49■□□□□ 0.39
LPCAT1-201ENST00000283415 NALCNQ8IZF0 1738 aa17.48■□□□□ 0.39
LPCAT1-201ENST00000283415 USP35Q9P2H5 1018 aa17.48■□□□□ 0.39
LPCAT1-201ENST00000283415 HDGFL2Q7Z4V5 671 aaPredicted RBP17.48■□□□□ 0.39
LPCAT1-201ENST00000283415 ATAD2Q6PL18 1390 aa17.47■□□□□ 0.39
LPCAT1-201ENST00000283415 CPSF1Q10570 1443 aaKnown RBP17.46■□□□□ 0.39
LPCAT1-201ENST00000283415 RGPD1P0DJD0 1748 aa17.45■□□□□ 0.38
LPCAT1-201ENST00000283415 TECPR2O15040 1411 aa17.45■□□□□ 0.38
LPCAT1-201ENST00000283415 FAM69CQ0P6D2 419 aa17.45■□□□□ 0.38
LPCAT1-201ENST00000283415 RIPK4P57078 832 aa17.44■□□□□ 0.38
LPCAT1-201ENST00000283415 FAM135BQ49AJ0 1406 aa17.44■□□□□ 0.38
LPCAT1-201ENST00000283415 CT47B1P0C2W7 299 aaPredicted RBP17.44■□□□□ 0.38
LPCAT1-201ENST00000283415 RLBP1P12271 317 aa17.44■□□□□ 0.38
LPCAT1-201ENST00000283415 LTV1Q96GA3 475 aaPredicted RBP17.44■□□□□ 0.38
LPCAT1-201ENST00000283415 PRAM1Q96QH2 718 aa17.44■□□□□ 0.38
LPCAT1-201ENST00000283415 TRIM35Q9UPQ4 493 aa17.44■□□□□ 0.38
LPCAT1-201ENST00000283415 UBR1Q8IWV7 1749 aa17.44■□□□□ 0.38
LPCAT1-201ENST00000283415 NCLP19338 710 aaKnown RBP17.44■□□□□ 0.38
LPCAT1-201ENST00000283415 MYH16Q9H6N6 1097 aa17.44■□□□□ 0.38
LPCAT1-201ENST00000283415 TNNQ9UQP3 1299 aa17.44■□□□□ 0.38
LPCAT1-201ENST00000283415 IL16Q14005 1332 aa17.43■□□□□ 0.38
LPCAT1-201ENST00000283415 PPP6R1Q9UPN7 881 aa17.43■□□□□ 0.38
LPCAT1-201ENST00000283415 FBXO31Q5XUX0 539 aaPredicted RBP17.43■□□□□ 0.38
LPCAT1-201ENST00000283415 THUMPD2Q9BTF0 503 aaKnown RBP17.42■□□□□ 0.38
LPCAT1-201ENST00000283415 TERF2IPQ9NYB0 399 aa17.42■□□□□ 0.38
LPCAT1-201ENST00000283415 ITSN1Q15811 1721 aa17.42■□□□□ 0.38
LPCAT1-201ENST00000283415 NAP1L5Q96NT1 182 aaPredicted RBP17.42■□□□□ 0.38
LPCAT1-201ENST00000283415 FYB1O15117 783 aa17.41■□□□□ 0.38
LPCAT1-201ENST00000283415 NECTIN2Q92692 538 aa17.4■□□□□ 0.38
LPCAT1-201ENST00000283415 EXOSC9Q06265 439 aaKnown RBP17.4■□□□□ 0.38
LPCAT1-201ENST00000283415 RWDD1Q9H446 243 aaPredicted RBP17.39■□□□□ 0.38
LPCAT1-201ENST00000283415 PCDHB15Q9Y5E8 787 aa17.39■□□□□ 0.38
LPCAT1-201ENST00000283415 WAPLQ7Z5K2 1190 aa17.39■□□□□ 0.37
LPCAT1-201ENST00000283415 C1orf115Q9H7X2 142 aa17.39■□□□□ 0.37
LPCAT1-201ENST00000283415 CABP1Q9NZU7 370 aa17.39■□□□□ 0.37
LPCAT1-201ENST00000283415 RIMS1Q86UR5 1692 aaKnown RBP17.39■□□□□ 0.37
LPCAT1-201ENST00000283415 BRPF1P55201 1214 aaPredicted RBP17.38■□□□□ 0.37
LPCAT1-201ENST00000283415 TSPOAP1O95153 1857 aa17.38■□□□□ 0.37
LPCAT1-201ENST00000283415 NUTM2GQ5VZR2 741 aa17.38■□□□□ 0.37
LPCAT1-201ENST00000283415 SLC4A10Q6U841 1118 aa17.38■□□□□ 0.37
LPCAT1-201ENST00000283415 CDK12Q9NYV4 1490 aaPredicted RBP17.37■□□□□ 0.37
LPCAT1-201ENST00000283415 TRHP20396 242 aaPredicted RBP17.37■□□□□ 0.37
LPCAT1-201ENST00000283415 LNPKQ9C0E8 428 aa17.37■□□□□ 0.37
LPCAT1-201ENST00000283415 USP54Q70EL1 1684 aa17.37■□□□□ 0.37
LPCAT1-201ENST00000283415 TXNDC2Q86VQ3 553 aa17.36■□□□□ 0.37
LPCAT1-201ENST00000283415 PIK3R4Q99570 1358 aa17.36■□□□□ 0.37
LPCAT1-201ENST00000283415 ZNF428Q96B54 188 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms