RNA–Protein interactions for RNA: ENST00000281834.3

TNFSF4-201, Transcript of TNF superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF4, Length 3,470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4-201ENST00000281834 CCDC61Q9Y6R9 512 aa7.8□□□□□ -1.16
TNFSF4-201ENST00000281834 SETBP1Q9Y6X0 1596 aa7.8□□□□□ -1.16
TNFSF4-201ENST00000281834 RARSP54136 660 aaKnown RBP7.79□□□□□ -1.16
TNFSF4-201ENST00000281834 MYH16Q9H6N6 1097 aa7.79□□□□□ -1.16
TNFSF4-201ENST00000281834 CLTCQ00610 1675 aaKnown RBP7.79□□□□□ -1.16
TNFSF4-201ENST00000281834 ABCC11Q96J66 1382 aa7.79□□□□□ -1.16
TNFSF4-201ENST00000281834 DCTN1Q14203 1278 aa7.79□□□□□ -1.16
TNFSF4-201ENST00000281834 ZBTB47Q9UFB7 747 aaPredicted RBP7.79□□□□□ -1.16
TNFSF4-201ENST00000281834 PPP6R1Q9UPN7 881 aa7.79□□□□□ -1.16
TNFSF4-201ENST00000281834 PREX1Q8TCU6 1659 aa7.79□□□□□ -1.16
TNFSF4-201ENST00000281834 PTPRMP28827 1452 aa7.79□□□□□ -1.16
TNFSF4-201ENST00000281834 SLC4A3P48751 1232 aa7.79□□□□□ -1.16
TNFSF4-201ENST00000281834 NGDNQ8NEJ9 315 aaKnown RBP7.79□□□□□ -1.16
TNFSF4-201ENST00000281834 PHACTR3Q96KR7 559 aa7.79□□□□□ -1.16
TNFSF4-201ENST00000281834 IGHDP01880 384 aa7.78□□□□□ -1.16
TNFSF4-201ENST00000281834 NOP58Q9Y2X3 529 aaKnown RBP7.78□□□□□ -1.16
TNFSF4-201ENST00000281834 ALKQ9UM73 1620 aa7.78□□□□□ -1.16
TNFSF4-201ENST00000281834 PPIP5K1Q6PFW1 1433 aa7.78□□□□□ -1.16
TNFSF4-201ENST00000281834 TMEM131LA2VDJ0 1609 aa7.78□□□□□ -1.16
TNFSF4-201ENST00000281834 ITPRIPQ8IWB1 547 aa7.78□□□□□ -1.16
TNFSF4-201ENST00000281834 TRMT2AQ8IZ69 625 aaKnown RBP7.78□□□□□ -1.16
TNFSF4-201ENST00000281834 AMOTL2Q9Y2J4 779 aa7.77□□□□□ -1.16
TNFSF4-201ENST00000281834 NEURL4Q96JN8 1562 aa7.77□□□□□ -1.17
TNFSF4-201ENST00000281834 FAM83GA6ND36 823 aa7.77□□□□□ -1.17
TNFSF4-201ENST00000281834 CENPQQ7L2Z9 268 aaPredicted RBP7.77□□□□□ -1.17
TNFSF4-201ENST00000281834 LTV1Q96GA3 475 aaPredicted RBP7.77□□□□□ -1.17
TNFSF4-201ENST00000281834 ZFYVE9O95405 1425 aa7.77□□□□□ -1.17
TNFSF4-201ENST00000281834 ROBO2Q9HCK4 1378 aa7.76□□□□□ -1.17
TNFSF4-201ENST00000281834 PRR36Q9H6K5 1346 aa7.76□□□□□ -1.17
TNFSF4-201ENST00000281834 AEBP1Q8IUX7 1158 aa7.76□□□□□ -1.17
TNFSF4-201ENST00000281834 TRIM35Q9UPQ4 493 aa7.76□□□□□ -1.17
TNFSF4-201ENST00000281834 ARHGEF28Q8N1W1 1705 aaKnown RBP7.76□□□□□ -1.17
TNFSF4-201ENST00000281834 INSRP06213 1382 aa7.76□□□□□ -1.17
TNFSF4-201ENST00000281834 ACEP12821 1306 aa7.76□□□□□ -1.17
TNFSF4-201ENST00000281834 LMOD2Q6P5Q4 547 aa7.76□□□□□ -1.17
TNFSF4-201ENST00000281834 WDR63Q8IWG1 891 aa7.76□□□□□ -1.17
TNFSF4-201ENST00000281834 SSH1Q8WYL5 1049 aa7.76□□□□□ -1.17
TNFSF4-201ENST00000281834 PUS7Q96PZ0 661 aaKnown RBP7.76□□□□□ -1.17
TNFSF4-201ENST00000281834 BACH2Q9BYV9 841 aa7.76□□□□□ -1.17
TNFSF4-201ENST00000281834 NSD2O96028 1365 aa7.76□□□□□ -1.17
TNFSF4-201ENST00000281834 TMEM2Q9UHN6 1383 aa7.76□□□□□ -1.17
TNFSF4-201ENST00000281834 IPO9Q96P70 1041 aaKnown RBP7.75□□□□□ -1.17
TNFSF4-201ENST00000281834 HSP90AB2PQ58FF8 381 aa7.75□□□□□ -1.17
TNFSF4-201ENST00000281834 SULT6B1Q6IMI4 303 aa7.75□□□□□ -1.17
TNFSF4-201ENST00000281834 PLEKHF1Q96S99 279 aa7.75□□□□□ -1.17
TNFSF4-201ENST00000281834 DAXXQ9UER7 740 aaPredicted RBP7.75□□□□□ -1.17
TNFSF4-201ENST00000281834 ZC3H13Q5T200 1668 aaKnown RBP7.75□□□□□ -1.17
TNFSF4-201ENST00000281834 NGEFQ8N5V2 710 aa7.75□□□□□ -1.17
TNFSF4-201ENST00000281834 NOB1Q9ULX3 412 aaKnown RBP7.75□□□□□ -1.17
TNFSF4-201ENST00000281834 PCDHB15Q9Y5E8 787 aa7.75□□□□□ -1.17
TNFSF4-201ENST00000281834 ZKSCAN2Q63HK3 967 aa7.74□□□□□ -1.17
TNFSF4-201ENST00000281834 NINLQ9Y2I6 1382 aa7.74□□□□□ -1.17
TNFSF4-201ENST00000281834 MYO3AQ8NEV4 1616 aa7.74□□□□□ -1.17
TNFSF4-201ENST00000281834 DZIP1LQ8IYY4 767 aaKnown RBP7.74□□□□□ -1.17
TNFSF4-201ENST00000281834 ARHGEF40Q8TER5 1519 aa7.74□□□□□ -1.17
TNFSF4-201ENST00000281834 CD163L1Q9NR16 1453 aa7.74□□□□□ -1.17
TNFSF4-201ENST00000281834 PDE3AQ14432 1141 aa7.73□□□□□ -1.17
TNFSF4-201ENST00000281834 MIS18AQ9NYP9 233 aa7.73□□□□□ -1.17
TNFSF4-201ENST00000281834 KDM2BQ8NHM5 1336 aa7.73□□□□□ -1.17
TNFSF4-201ENST00000281834 FCHSD2O94868 740 aa7.73□□□□□ -1.17
TNFSF4-201ENST00000281834 TRIM27P14373 513 aa7.73□□□□□ -1.17
TNFSF4-201ENST00000281834 KCNA6P17658 529 aa7.73□□□□□ -1.17
TNFSF4-201ENST00000281834 XPCQ01831 940 aaPredicted RBP7.73□□□□□ -1.17
TNFSF4-201ENST00000281834 TSPYL6Q8N831 410 aa7.73□□□□□ -1.17
TNFSF4-201ENST00000281834 RSPH6AQ9H0K4 717 aa7.73□□□□□ -1.17
TNFSF4-201ENST00000281834 C1orf115Q9H7X2 142 aa7.73□□□□□ -1.17
TNFSF4-201ENST00000281834 AMPHP49418 695 aa7.73□□□□□ -1.17
TNFSF4-201ENST00000281834 NLRP6P59044 892 aa7.73□□□□□ -1.17
TNFSF4-201ENST00000281834 KRT24Q2M2I5 525 aa7.73□□□□□ -1.17
TNFSF4-201ENST00000281834 MCM10Q7L590 875 aa7.73□□□□□ -1.17
TNFSF4-201ENST00000281834 THEMISQ8N1K5 641 aaPredicted RBP7.73□□□□□ -1.17
TNFSF4-201ENST00000281834 PNNQ9H307 717 aaKnown RBP7.72□□□□□ -1.17
TNFSF4-201ENST00000281834 KIF13AQ9H1H9 1805 aa7.72□□□□□ -1.17
TNFSF4-201ENST00000281834 TTC21BQ7Z4L5 1316 aa7.72□□□□□ -1.17
TNFSF4-201ENST00000281834 TMEM57Q8N5G2 664 aa7.72□□□□□ -1.17
TNFSF4-201ENST00000281834 MS4A1P11836 297 aa7.71□□□□□ -1.17
TNFSF4-201ENST00000281834 NFE2L2Q16236 605 aa7.71□□□□□ -1.17
TNFSF4-201ENST00000281834 CCDC27Q2M243 656 aa7.71□□□□□ -1.17
TNFSF4-201ENST00000281834 NECTIN2Q92692 538 aa7.71□□□□□ -1.17
TNFSF4-201ENST00000281834 PHF23Q9BUL5 403 aaPredicted RBP7.71□□□□□ -1.17
TNFSF4-201ENST00000281834 AGLP35573 1532 aa7.71□□□□□ -1.17
TNFSF4-201ENST00000281834 IL13P35225 146 aa7.71□□□□□ -1.18
TNFSF4-201ENST00000281834 ZNF692Q9BU19 519 aaPredicted RBP7.71□□□□□ -1.18
TNFSF4-201ENST00000281834 FOXO3O43524 673 aa7.71□□□□□ -1.18
TNFSF4-201ENST00000281834 EIF4A2Q14240 407 aaKnown RBP7.71□□□□□ -1.18
TNFSF4-201ENST00000281834 MVPQ14764 893 aaKnown RBP7.71□□□□□ -1.18
TNFSF4-201ENST00000281834 FAM161AQ3B820 660 aa7.71□□□□□ -1.18
TNFSF4-201ENST00000281834 ATF7IPQ6VMQ6 1270 aa7.71□□□□□ -1.18
TNFSF4-201ENST00000281834 SPATA31D1Q6ZQQ2 1576 aa7.7□□□□□ -1.18
TNFSF4-201ENST00000281834 APBB1O00213 710 aa7.7□□□□□ -1.18
TNFSF4-201ENST00000281834 PDZRN3Q9UPQ7 1066 aa7.7□□□□□ -1.18
TNFSF4-201ENST00000281834 USHBP1Q8N6Y0 703 aa7.7□□□□□ -1.18
TNFSF4-201ENST00000281834 ABTB2Q8N961 1025 aa7.7□□□□□ -1.18
TNFSF4-201ENST00000281834 MBIPQ9NS73 344 aa7.7□□□□□ -1.18
TNFSF4-201ENST00000281834 RTL5Q5HYW3 569 aaPredicted RBP7.69□□□□□ -1.18
TNFSF4-201ENST00000281834 EDC4Q6P2E9 1401 aaKnown RBP7.69□□□□□ -1.18
TNFSF4-201ENST00000281834 C8orf58Q8NAV2 365 aa7.69□□□□□ -1.18
TNFSF4-201ENST00000281834 RWDD1Q9H446 243 aaPredicted RBP7.69□□□□□ -1.18
TNFSF4-201ENST00000281834 NLRP1Q9C000 1473 aa7.69□□□□□ -1.18
TNFSF4-201ENST00000281834 CPS1P31327 1500 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 162.1 ms