RNA–Protein interactions for RNA: ENST00000281821.6

EPHA4-201, Transcript of EPH receptor A4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHA4, Length 6,346 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-201ENST00000281821 MTHFSP49914 203 aa9.96□□□□□ -0.81
EPHA4-201ENST00000281821 NPHP1O15259 732 aa9.96□□□□□ -0.82
EPHA4-201ENST00000281821 DIP2AQ14689 1571 aa9.95□□□□□ -0.82
EPHA4-201ENST00000281821 ADGRL3Q9HAR2 1447 aa9.95□□□□□ -0.82
EPHA4-201ENST00000281821 DDX58O95786 925 aaKnown RBP9.95□□□□□ -0.82
EPHA4-201ENST00000281821 WWC1Q8IX03 1113 aa9.95□□□□□ -0.82
EPHA4-201ENST00000281821 CAMSAP1Q5T5Y3 1602 aa9.94□□□□□ -0.82
EPHA4-201ENST00000281821 TESK2Q96S53 571 aa9.94□□□□□ -0.82
EPHA4-201ENST00000281821 LAS1LQ9Y4W2 734 aaKnown RBP9.94□□□□□ -0.82
EPHA4-201ENST00000281821 FLT4P35916 1363 aa9.93□□□□□ -0.82
EPHA4-201ENST00000281821 LAMC1P11047 1609 aa9.93□□□□□ -0.82
EPHA4-201ENST00000281821 DCCP43146 1447 aa9.93□□□□□ -0.82
EPHA4-201ENST00000281821 SALL2Q9Y467 1007 aaPredicted RBP9.93□□□□□ -0.82
EPHA4-201ENST00000281821 DLC1Q96QB1 1528 aa9.93□□□□□ -0.82
EPHA4-201ENST00000281821 KIF1BO60333 1816 aa9.92□□□□□ -0.82
EPHA4-201ENST00000281821 NCBP3Q53F19 620 aaKnown RBP9.92□□□□□ -0.82
EPHA4-201ENST00000281821 ATP7BP35670 1465 aa9.92□□□□□ -0.82
EPHA4-201ENST00000281821 RICTORQ6R327 1708 aa9.92□□□□□ -0.82
EPHA4-201ENST00000281821 CEP170BQ9Y4F5 1589 aaPredicted RBP9.92□□□□□ -0.82
EPHA4-201ENST00000281821 NEXNQ0ZGT2 675 aa9.91□□□□□ -0.82
EPHA4-201ENST00000281821 API5Q9BZZ5 524 aaKnown RBP9.91□□□□□ -0.82
EPHA4-201ENST00000281821 TEX13AQ9BXU3 409 aaPredicted RBP9.91□□□□□ -0.82
EPHA4-201ENST00000281821 HTATSF1O43719 755 aaKnown RBP9.91□□□□□ -0.82
EPHA4-201ENST00000281821 HMMRO75330 724 aa9.91□□□□□ -0.82
EPHA4-201ENST00000281821 TECPR2O15040 1411 aa9.91□□□□□ -0.82
EPHA4-201ENST00000281821 ZBED9Q6R2W3 1325 aa9.9□□□□□ -0.82
EPHA4-201ENST00000281821 ARXQ96QS3 562 aa9.9□□□□□ -0.82
EPHA4-201ENST00000281821 UPF2Q9HAU5 1272 aaKnown RBP9.9□□□□□ -0.82
EPHA4-201ENST00000281821 SETBP1Q9Y6X0 1596 aa9.9□□□□□ -0.82
EPHA4-201ENST00000281821 DEPDC5O75140 1603 aa9.9□□□□□ -0.82
EPHA4-201ENST00000281821 ZNF530Q6P9A1 599 aaPredicted RBP9.9□□□□□ -0.82
EPHA4-201ENST00000281821 NUTM2BA6NNL0 878 aaPredicted RBP9.9□□□□□ -0.83
EPHA4-201ENST00000281821 NUTM2EB1AL46 878 aaPredicted RBP9.9□□□□□ -0.83
EPHA4-201ENST00000281821 NUTM2AQ8IVF1 878 aaPredicted RBP9.9□□□□□ -0.83
EPHA4-201ENST00000281821 METP08581 1390 aa9.9□□□□□ -0.83
EPHA4-201ENST00000281821 FRMPD1Q5SYB0 1578 aa9.89□□□□□ -0.83
EPHA4-201ENST00000281821 RIPK4P57078 832 aa9.89□□□□□ -0.83
EPHA4-201ENST00000281821 WDR63Q8IWG1 891 aa9.89□□□□□ -0.83
EPHA4-201ENST00000281821 ASXL1Q8IXJ9 1541 aa9.89□□□□□ -0.83
EPHA4-201ENST00000281821 EXOC5O00471 708 aa9.89□□□□□ -0.83
EPHA4-201ENST00000281821 MYO3AQ8NEV4 1616 aa9.89□□□□□ -0.83
EPHA4-201ENST00000281821 KIF16BQ96L93 1317 aa9.89□□□□□ -0.83
EPHA4-201ENST00000281821 SMARCC1Q92922 1105 aaPredicted RBP9.89□□□□□ -0.83
EPHA4-201ENST00000281821 STRN4Q9NRL3 753 aa9.89□□□□□ -0.83
EPHA4-201ENST00000281821 SOS1Q07889 1333 aaPredicted RBP9.89□□□□□ -0.83
EPHA4-201ENST00000281821 ARHGAP23Q9P227 1491 aa9.89□□□□□ -0.83
EPHA4-201ENST00000281821 SLIT1O75093 1534 aa9.88□□□□□ -0.83
EPHA4-201ENST00000281821 RTL1A6NKG5 1358 aa9.88□□□□□ -0.83
EPHA4-201ENST00000281821 LRRIQ1Q96JM4 1722 aa9.88□□□□□ -0.83
EPHA4-201ENST00000281821 INSRP06213 1382 aa9.88□□□□□ -0.83
EPHA4-201ENST00000281821 SPHKAPQ2M3C7 1700 aa9.88□□□□□ -0.83
EPHA4-201ENST00000281821 POLR3AO14802 1390 aaPredicted RBP9.88□□□□□ -0.83
EPHA4-201ENST00000281821 NME9Q86XW9 330 aa9.88□□□□□ -0.83
EPHA4-201ENST00000281821 CPS1P31327 1500 aa9.88□□□□□ -0.83
EPHA4-201ENST00000281821 GCP02774 474 aa9.87□□□□□ -0.83
EPHA4-201ENST00000281821 ZC3H6P61129 1189 aaKnown RBP9.87□□□□□ -0.83
EPHA4-201ENST00000281821 SBNO1A3KN83 1393 aa9.87□□□□□ -0.83
EPHA4-201ENST00000281821 PPRC1Q5VV67 1664 aaKnown RBP9.87□□□□□ -0.83
EPHA4-201ENST00000281821 NUTM2GQ5VZR2 741 aa9.87□□□□□ -0.83
EPHA4-201ENST00000281821 CERKQ8TCT0 537 aa9.87□□□□□ -0.83
EPHA4-201ENST00000281821 PRKAR2BP31323 418 aa9.87□□□□□ -0.83
EPHA4-201ENST00000281821 IFNL2Q8IZJ0 200 aa9.87□□□□□ -0.83
EPHA4-201ENST00000281821 DISP3Q9P2K9 1392 aa9.87□□□□□ -0.83
EPHA4-201ENST00000281821 BCORL1Q5H9F3 1711 aa9.87□□□□□ -0.83
EPHA4-201ENST00000281821 CLTCQ00610 1675 aaKnown RBP9.87□□□□□ -0.83
EPHA4-201ENST00000281821 FYB1O15117 783 aa9.87□□□□□ -0.83
EPHA4-201ENST00000281821 SULT6B1Q6IMI4 303 aa9.87□□□□□ -0.83
EPHA4-201ENST00000281821 IP6K1Q92551 441 aa9.87□□□□□ -0.83
EPHA4-201ENST00000281821 CCDC136Q96JN2 1154 aa9.87□□□□□ -0.83
EPHA4-201ENST00000281821 ANO8Q9HCE9 1232 aaPredicted RBP9.87□□□□□ -0.83
EPHA4-201ENST00000281821 MROH2AA6NES4 1674 aa9.86□□□□□ -0.83
EPHA4-201ENST00000281821 BABAM1Q9NWV8 329 aa9.86□□□□□ -0.83
EPHA4-201ENST00000281821 NFE2L2Q16236 605 aa9.86□□□□□ -0.83
EPHA4-201ENST00000281821 AATKQ6ZMQ8 1374 aa9.86□□□□□ -0.83
EPHA4-201ENST00000281821 DCAF8L1A6NGE4 600 aa9.86□□□□□ -0.83
EPHA4-201ENST00000281821 RTL5Q5HYW3 569 aaPredicted RBP9.86□□□□□ -0.83
EPHA4-201ENST00000281821 ZNF772Q68DY9 489 aaPredicted RBP9.85□□□□□ -0.83
EPHA4-201ENST00000281821 GTF2E1P29083 439 aaPredicted RBP9.85□□□□□ -0.83
EPHA4-201ENST00000281821 ROBO2Q9HCK4 1378 aa9.85□□□□□ -0.83
EPHA4-201ENST00000281821 CLTCL1P53675 1640 aa9.85□□□□□ -0.83
EPHA4-201ENST00000281821 CABP4P57796 275 aa9.85□□□□□ -0.83
EPHA4-201ENST00000281821 TCP11L2Q8N4U5 519 aa9.85□□□□□ -0.83
EPHA4-201ENST00000281821 APAF1O14727 1248 aa9.85□□□□□ -0.83
EPHA4-201ENST00000281821 TSPYL4Q9UJ04 414 aa9.85□□□□□ -0.83
EPHA4-201ENST00000281821 IL16Q14005 1332 aa9.84□□□□□ -0.83
EPHA4-201ENST00000281821 CCDC30Q5VVM6 783 aa9.84□□□□□ -0.83
EPHA4-201ENST00000281821 RIMS1Q86UR5 1692 aaKnown RBP9.84□□□□□ -0.83
EPHA4-201ENST00000281821 A0A1W2PP64 1363 aa9.84□□□□□ -0.83
EPHA4-201ENST00000281821 AMER1Q5JTC6 1135 aaPredicted RBP9.84□□□□□ -0.83
EPHA4-201ENST00000281821 SMC4Q9NTJ3 1288 aa9.84□□□□□ -0.83
EPHA4-201ENST00000281821 GNAT3A8MTJ3 354 aa9.84□□□□□ -0.83
EPHA4-201ENST00000281821 ANKRD24Q8TF21 1146 aa9.84□□□□□ -0.83
EPHA4-201ENST00000281821 RCAN3Q9UKA8 241 aa9.84□□□□□ -0.83
EPHA4-201ENST00000281821 ZNF335Q9H4Z2 1342 aaPredicted RBP9.84□□□□□ -0.83
EPHA4-201ENST00000281821 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.84□□□□□ -0.83
EPHA4-201ENST00000281821 SPATA31A6Q5VVP1 1343 aa9.83□□□□□ -0.84
EPHA4-201ENST00000281821 CASC1Q6TDU7 716 aa9.83□□□□□ -0.84
EPHA4-201ENST00000281821 ALKQ9UM73 1620 aa9.83□□□□□ -0.84
EPHA4-201ENST00000281821 NRXN1Q9ULB1 1477 aa9.83□□□□□ -0.84
EPHA4-201ENST00000281821 MADDQ8WXG6 1647 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms