RNA–Protein interactions for RNA: ENST00000280154.11

PDCD4-201, Transcript of programmed cell death 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDCD4, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-201ENST00000280154 ANKRD26Q9UPS8 1709 aa12.72□□□□□ -0.37
PDCD4-201ENST00000280154 LTKP29376 864 aa12.71□□□□□ -0.37
PDCD4-201ENST00000280154 DCCP43146 1447 aa12.71□□□□□ -0.37
PDCD4-201ENST00000280154 MLECQ14165 292 aa12.7□□□□□ -0.38
PDCD4-201ENST00000280154 MARF1Q9Y4F3 1742 aaKnown RBP12.7□□□□□ -0.38
PDCD4-201ENST00000280154 MST1RQ04912 1400 aa12.7□□□□□ -0.38
PDCD4-201ENST00000280154 CLSTN1O94985 981 aa12.69□□□□□ -0.38
PDCD4-201ENST00000280154 HDGFP51858 240 aaKnown RBP12.69□□□□□ -0.38
PDCD4-201ENST00000280154 KIF1AQ12756 1690 aa12.69□□□□□ -0.38
PDCD4-201ENST00000280154 METP08581 1390 aa12.68□□□□□ -0.38
PDCD4-201ENST00000280154 FAM177A1Q8N128 213 aaPredicted RBP12.68□□□□□ -0.38
PDCD4-201ENST00000280154 CRYBG1Q9Y4K1 1723 aa12.68□□□□□ -0.38
PDCD4-201ENST00000280154 FAM193AP78312 1265 aa12.67□□□□□ -0.38
PDCD4-201ENST00000280154 CNGB1Q14028 1251 aaPredicted RBP12.66□□□□□ -0.38
PDCD4-201ENST00000280154 TRPM3Q9HCF6 1732 aaPredicted RBP12.66□□□□□ -0.38
PDCD4-201ENST00000280154 FOXD4L6Q3SYB3 417 aaPredicted RBP12.66□□□□□ -0.38
PDCD4-201ENST00000280154 FOXD4L3Q6VB84 417 aaPredicted RBP12.66□□□□□ -0.38
PDCD4-201ENST00000280154 YTHDC1Q96MU7 727 aaKnown RBP12.66□□□□□ -0.38
PDCD4-201ENST00000280154 NHSL1Q5SYE7 1610 aa12.65□□□□□ -0.38
PDCD4-201ENST00000280154 IPO4Q8TEX9 1081 aaKnown RBP12.65□□□□□ -0.38
PDCD4-201ENST00000280154 FTSJ3Q8IY81 847 aaKnown RBP12.64□□□□□ -0.39
PDCD4-201ENST00000280154 TESK2Q96S53 571 aa12.64□□□□□ -0.39
PDCD4-201ENST00000280154 DCAF11Q8TEB1 546 aa12.64□□□□□ -0.39
PDCD4-201ENST00000280154 PHRF1Q9P1Y6 1649 aaKnown RBP12.63□□□□□ -0.39
PDCD4-201ENST00000280154 ANKARQ7Z5J8 1434 aa12.63□□□□□ -0.39
PDCD4-201ENST00000280154 EIF3AQ14152 1382 aaKnown RBP12.63□□□□□ -0.39
PDCD4-201ENST00000280154 USP47Q96K76 1375 aa12.63□□□□□ -0.39
PDCD4-201ENST00000280154 APPP05067 770 aa12.62□□□□□ -0.39
PDCD4-201ENST00000280154 ROCK2O75116 1388 aaKnown RBP12.62□□□□□ -0.39
PDCD4-201ENST00000280154 ANKLE2Q86XL3 938 aa12.61□□□□□ -0.39
PDCD4-201ENST00000280154 RGPD8O14715 1765 aaPredicted RBP12.61□□□□□ -0.39
PDCD4-201ENST00000280154 CD163L1Q9NR16 1453 aa12.61□□□□□ -0.39
PDCD4-201ENST00000280154 ADGRL3Q9HAR2 1447 aa12.61□□□□□ -0.39
PDCD4-201ENST00000280154 KIF20BQ96Q89 1820 aa12.61□□□□□ -0.39
PDCD4-201ENST00000280154 NPM3O75607 178 aaKnown RBP12.6□□□□□ -0.39
PDCD4-201ENST00000280154 ATP7BP35670 1465 aa12.6□□□□□ -0.39
PDCD4-201ENST00000280154 ALS2Q96Q42 1657 aa12.6□□□□□ -0.39
PDCD4-201ENST00000280154 ROBO2Q9HCK4 1378 aa12.6□□□□□ -0.39
PDCD4-201ENST00000280154 NINLQ9Y2I6 1382 aa12.6□□□□□ -0.39
PDCD4-201ENST00000280154 TEX2Q8IWB9 1127 aa12.6□□□□□ -0.39
PDCD4-201ENST00000280154 COL22A1Q8NFW1 1626 aaPredicted RBP12.58□□□□□ -0.4
PDCD4-201ENST00000280154 MED1Q15648 1581 aaPredicted RBP12.58□□□□□ -0.4
PDCD4-201ENST00000280154 NBPF1Q3BBV0 1214 aa12.58□□□□□ -0.4
PDCD4-201ENST00000280154 EID1Q9Y6B2 187 aa12.58□□□□□ -0.4
PDCD4-201ENST00000280154 VGLL3A8MV65 326 aa12.57□□□□□ -0.4
PDCD4-201ENST00000280154 ANAPC15P60006 121 aa12.57□□□□□ -0.4
PDCD4-201ENST00000280154 CFAP70Q5T0N1 1121 aa12.57□□□□□ -0.4
PDCD4-201ENST00000280154 TXNDC2Q86VQ3 553 aa12.57□□□□□ -0.4
PDCD4-201ENST00000280154 CDCA8Q53HL2 280 aa12.57□□□□□ -0.4
PDCD4-201ENST00000280154 SSH2Q76I76 1423 aa12.57□□□□□ -0.4
PDCD4-201ENST00000280154 KCNA6P17658 529 aa12.56□□□□□ -0.4
PDCD4-201ENST00000280154 CCDC27Q2M243 656 aa12.56□□□□□ -0.4
PDCD4-201ENST00000280154 AHDC1Q5TGY3 1603 aaPredicted RBP12.56□□□□□ -0.4
PDCD4-201ENST00000280154 ABCA3Q99758 1704 aa12.56□□□□□ -0.4
PDCD4-201ENST00000280154 CPSF1Q10570 1443 aaKnown RBP12.55□□□□□ -0.4
PDCD4-201ENST00000280154 APBB1O00213 710 aa12.55□□□□□ -0.4
PDCD4-201ENST00000280154 BRD4O60885 1362 aaPredicted RBP12.54□□□□□ -0.4
PDCD4-201ENST00000280154 MPNDQ8N594 471 aa12.54□□□□□ -0.4
PDCD4-201ENST00000280154 NPC1L1Q9UHC9 1359 aa12.54□□□□□ -0.4
PDCD4-201ENST00000280154 GPATCH11Q8N954 259 aa12.53□□□□□ -0.4
PDCD4-201ENST00000280154 GTF2E1P29083 439 aaPredicted RBP12.53□□□□□ -0.4
PDCD4-201ENST00000280154 POLR3AO14802 1390 aaPredicted RBP12.52□□□□□ -0.4
PDCD4-201ENST00000280154 RGL3Q3MIN7 710 aa12.52□□□□□ -0.4
PDCD4-201ENST00000280154 ABCC6O95255 1503 aa12.52□□□□□ -0.4
PDCD4-201ENST00000280154 DMRT2Q9Y5R5 561 aa12.52□□□□□ -0.41
PDCD4-201ENST00000280154 CCDC7Q96M83 1385 aa12.52□□□□□ -0.41
PDCD4-201ENST00000280154 DISP3Q9P2K9 1392 aa12.52□□□□□ -0.41
PDCD4-201ENST00000280154 NCKAP5LQ9HCH0 1330 aa12.51□□□□□ -0.41
PDCD4-201ENST00000280154 PLEKHH1Q9ULM0 1364 aa12.51□□□□□ -0.41
PDCD4-201ENST00000280154 PIK3C2AO00443 1686 aa12.5□□□□□ -0.41
PDCD4-201ENST00000280154 HSPA5P11021 654 aaKnown RBP12.49□□□□□ -0.41
PDCD4-201ENST00000280154 RGS3P49796 1198 aa12.49□□□□□ -0.41
PDCD4-201ENST00000280154 EIF4G2P78344 907 aaKnown RBP eCLIP12.49□□□□□ -0.41
PDCD4-201ENST00000280154 CENPJQ9HC77 1338 aaPredicted RBP12.49□□□□□ -0.41
PDCD4-201ENST00000280154 CAMTA1Q9Y6Y1 1673 aa12.49□□□□□ -0.41
PDCD4-201ENST00000280154 SHPRHQ149N8 1683 aa12.48□□□□□ -0.41
PDCD4-201ENST00000280154 PTMAP06454 111 aaKnown RBP12.48□□□□□ -0.41
PDCD4-201ENST00000280154 CARD11Q9BXL7 1154 aa12.47□□□□□ -0.41
PDCD4-201ENST00000280154 SLIT3O75094 1523 aa12.47□□□□□ -0.41
PDCD4-201ENST00000280154 PXDNQ92626 1479 aa12.46□□□□□ -0.41
PDCD4-201ENST00000280154 WASHC2AQ641Q2 1341 aa12.46□□□□□ -0.41
PDCD4-201ENST00000280154 STAG3Q9UJ98 1225 aa12.46□□□□□ -0.41
PDCD4-201ENST00000280154 ATAD2Q6PL18 1390 aa12.46□□□□□ -0.42
PDCD4-201ENST00000280154 SMG6Q86US8 1419 aaKnown RBP12.45□□□□□ -0.42
PDCD4-201ENST00000280154 E9PSI1 815 aa12.45□□□□□ -0.42
PDCD4-201ENST00000280154 COL16A1Q07092 1604 aaPredicted RBP12.45□□□□□ -0.42
PDCD4-201ENST00000280154 C11orf95C9JLR9 678 aaPredicted RBP12.45□□□□□ -0.42
PDCD4-201ENST00000280154 NEUROD2Q15784 382 aa12.45□□□□□ -0.42
PDCD4-201ENST00000280154 AMOTL2Q9Y2J4 779 aa12.44□□□□□ -0.42
PDCD4-201ENST00000280154 KIF7Q2M1P5 1343 aa12.44□□□□□ -0.42
PDCD4-201ENST00000280154 RNF216Q9NWF9 866 aaPredicted RBP12.43□□□□□ -0.42
PDCD4-201ENST00000280154 LMO7Q8WWI1 1683 aa12.43□□□□□ -0.42
PDCD4-201ENST00000280154 ROBO1Q9Y6N7 1651 aa12.43□□□□□ -0.42
PDCD4-201ENST00000280154 C1orf167Q5SNV9 1468 aa12.43□□□□□ -0.42
PDCD4-201ENST00000280154 ST20-MTHFSA0A0A6YYL1 179 aa12.43□□□□□ -0.42
PDCD4-201ENST00000280154 RGPD1P0DJD0 1748 aa12.43□□□□□ -0.42
PDCD4-201ENST00000280154 KTN1Q86UP2 1357 aaKnown RBP12.43□□□□□ -0.42
PDCD4-201ENST00000280154 ANKRD36BQ8N2N9 1353 aa12.43□□□□□ -0.42
PDCD4-201ENST00000280154 COL18A1P39060 1754 aa12.43□□□□□ -0.42
PDCD4-201ENST00000280154 PLEKHG3A1L390 1219 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms