RNA–Protein interactions for RNA: ENST00000279052.10

ERGIC3-201, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 2,846 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-201ENST00000279052 LIG1P18858 919 aa12.93□□□□□ -0.34
ERGIC3-201ENST00000279052 SWT1Q5T5J6 900 aaKnown RBP12.93□□□□□ -0.34
ERGIC3-201ENST00000279052 PAIP2Q9BPZ3 127 aaKnown RBP12.93□□□□□ -0.34
ERGIC3-201ENST00000279052 RRP7BPQ9NSQ0 103 aa12.93□□□□□ -0.34
ERGIC3-201ENST00000279052 ZC3H12AQ5D1E8 599 aaKnown RBP12.92□□□□□ -0.34
ERGIC3-201ENST00000279052 ANKRD23Q86SG2 305 aa12.92□□□□□ -0.34
ERGIC3-201ENST00000279052 KRT222Q8N1A0 295 aa12.92□□□□□ -0.34
ERGIC3-201ENST00000279052 EHBP1L1Q8N3D4 1523 aa12.92□□□□□ -0.34
ERGIC3-201ENST00000279052 SUPT6HQ7KZ85 1726 aaKnown RBP12.92□□□□□ -0.34
ERGIC3-201ENST00000279052 IPO8O15397 1037 aaKnown RBP12.92□□□□□ -0.34
ERGIC3-201ENST00000279052 GSCP56915 257 aaPredicted RBP12.92□□□□□ -0.34
ERGIC3-201ENST00000279052 SRPK2P78362 688 aaKnown RBP12.92□□□□□ -0.34
ERGIC3-201ENST00000279052 TRDNQ13061 729 aa12.92□□□□□ -0.34
ERGIC3-201ENST00000279052 C11orf91Q3C1V1 193 aa12.92□□□□□ -0.34
ERGIC3-201ENST00000279052 DEF6Q9H4E7 631 aa12.92□□□□□ -0.34
ERGIC3-201ENST00000279052 CTNNA3Q9UI47 895 aa12.92□□□□□ -0.34
ERGIC3-201ENST00000279052 CHIC2Q9UKJ5 165 aa12.92□□□□□ -0.34
ERGIC3-201ENST00000279052 CCDC27Q2M243 656 aa12.91□□□□□ -0.34
ERGIC3-201ENST00000279052 THOC2Q8NI27 1593 aaKnown RBP12.91□□□□□ -0.34
ERGIC3-201ENST00000279052 LAMC3Q9Y6N6 1575 aa12.9□□□□□ -0.34
ERGIC3-201ENST00000279052 TSHZ1Q6ZSZ6 1077 aa12.9□□□□□ -0.34
ERGIC3-201ENST00000279052 DRC1Q96MC2 740 aa12.9□□□□□ -0.34
ERGIC3-201ENST00000279052 ABCA5Q8WWZ7 1642 aa12.9□□□□□ -0.34
ERGIC3-201ENST00000279052 FAM177BA6PVY3 158 aa12.9□□□□□ -0.34
ERGIC3-201ENST00000279052 RINLQ6ZS11 566 aa12.9□□□□□ -0.34
ERGIC3-201ENST00000279052 GBP4Q96PP9 640 aa12.9□□□□□ -0.34
ERGIC3-201ENST00000279052 REC8O95072 547 aa12.89□□□□□ -0.35
ERGIC3-201ENST00000279052 CYP2C19P33261 490 aa12.89□□□□□ -0.35
ERGIC3-201ENST00000279052 GOLGA6L22H0YM25 854 aa12.89□□□□□ -0.35
ERGIC3-201ENST00000279052 ATP2B1P20020 1258 aa12.89□□□□□ -0.35
ERGIC3-201ENST00000279052 GYS2P54840 703 aa12.89□□□□□ -0.35
ERGIC3-201ENST00000279052 ARMCX6Q7L4S7 300 aa12.89□□□□□ -0.35
ERGIC3-201ENST00000279052 DIAPH3Q9NSV4 1193 aa12.89□□□□□ -0.35
ERGIC3-201ENST00000279052 ATP6V1AP38606 617 aa12.89□□□□□ -0.35
ERGIC3-201ENST00000279052 FAM212AQ96EL1 285 aa12.89□□□□□ -0.35
ERGIC3-201ENST00000279052 PDS5BQ9NTI5 1447 aa12.88□□□□□ -0.35
ERGIC3-201ENST00000279052 MUM1L1Q5H9M0 696 aa12.88□□□□□ -0.35
ERGIC3-201ENST00000279052 LRRIQ1Q96JM4 1722 aa12.88□□□□□ -0.35
ERGIC3-201ENST00000279052 CTAGE5O15320 804 aa12.88□□□□□ -0.35
ERGIC3-201ENST00000279052 CT47B1P0C2W7 299 aaPredicted RBP12.88□□□□□ -0.35
ERGIC3-201ENST00000279052 PPP2R5AQ15172 486 aa12.88□□□□□ -0.35
ERGIC3-201ENST00000279052 SYCP1Q15431 976 aa12.88□□□□□ -0.35
ERGIC3-201ENST00000279052 RPAINQ86UA6 219 aa12.88□□□□□ -0.35
ERGIC3-201ENST00000279052 UGGT2Q9NYU1 1516 aa12.87□□□□□ -0.35
ERGIC3-201ENST00000279052 H0YHG0 523 aa12.87□□□□□ -0.35
ERGIC3-201ENST00000279052 CTIFO43310 598 aaKnown RBP12.87□□□□□ -0.35
ERGIC3-201ENST00000279052 SARNPP82979 210 aaKnown RBP12.87□□□□□ -0.35
ERGIC3-201ENST00000279052 CHAF1AQ13111 956 aaPredicted RBP12.87□□□□□ -0.35
ERGIC3-201ENST00000279052 MYO1CO00159 1063 aa12.86□□□□□ -0.35
ERGIC3-201ENST00000279052 IPO7O95373 1038 aaKnown RBP12.86□□□□□ -0.35
ERGIC3-201ENST00000279052 HSPA5P11021 654 aaKnown RBP12.86□□□□□ -0.35
ERGIC3-201ENST00000279052 HSP90AB4PQ58FF6 505 aa12.86□□□□□ -0.35
ERGIC3-201ENST00000279052 C10orf67Q8IYJ2 551 aa12.86□□□□□ -0.35
ERGIC3-201ENST00000279052 NLRP1Q9C000 1473 aa12.86□□□□□ -0.35
ERGIC3-201ENST00000279052 A0A1B0GUL7 405 aa12.86□□□□□ -0.35
ERGIC3-201ENST00000279052 PIBF1Q8WXW3 757 aa12.86□□□□□ -0.35
ERGIC3-201ENST00000279052 CRBNQ96SW2 442 aa12.86□□□□□ -0.35
ERGIC3-201ENST00000279052 EIF4G2P78344 907 aaKnown RBP eCLIP12.85□□□□□ -0.35
ERGIC3-201ENST00000279052 POLKQ9UBT6 870 aa12.85□□□□□ -0.35
ERGIC3-201ENST00000279052 NRDCO43847 1150 aa12.85□□□□□ -0.35
ERGIC3-201ENST00000279052 ZNF445P59923 1031 aa12.85□□□□□ -0.35
ERGIC3-201ENST00000279052 SART3Q15020 963 aaKnown RBP12.85□□□□□ -0.35
ERGIC3-201ENST00000279052 PAXBP1Q9Y5B6 917 aa12.85□□□□□ -0.35
ERGIC3-201ENST00000279052 HDAC1Q13547 482 aaPredicted RBP12.84□□□□□ -0.35
ERGIC3-201ENST00000279052 NOLC1Q14978 699 aaKnown RBP eCLIP12.84□□□□□ -0.35
ERGIC3-201ENST00000279052 MAP9Q49MG5 647 aa12.84□□□□□ -0.35
ERGIC3-201ENST00000279052 NUCKS1Q9H1E3 243 aaKnown RBP12.84□□□□□ -0.35
ERGIC3-201ENST00000279052 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.84□□□□□ -0.358e-11■■■■■ 211.4
ERGIC3-201ENST00000279052 RPS6KL1Q9Y6S9 549 aa12.84□□□□□ -0.35
ERGIC3-201ENST00000279052 COQ9O75208 318 aa12.84□□□□□ -0.35
ERGIC3-201ENST00000279052 FKBP5Q13451 457 aaPredicted RBP12.84□□□□□ -0.35
ERGIC3-201ENST00000279052 SPRYD3Q8NCJ5 442 aa12.84□□□□□ -0.35
ERGIC3-201ENST00000279052 TBC1D22AQ8WUA7 517 aa12.84□□□□□ -0.35
ERGIC3-201ENST00000279052 ARHGEF11O15085 1522 aa12.83□□□□□ -0.36
ERGIC3-201ENST00000279052 MAGI3Q5TCQ9 1506 aa12.83□□□□□ -0.36
ERGIC3-201ENST00000279052 KDM5BQ9UGL1 1544 aa12.83□□□□□ -0.36
ERGIC3-201ENST00000279052 CCDC196A0A1B0GTZ2 297 aa12.83□□□□□ -0.36
ERGIC3-201ENST00000279052 C20orf194Q5TEA3 1177 aa12.83□□□□□ -0.36
ERGIC3-201ENST00000279052 DNAJC14Q6Y2X3 702 aaPredicted RBP12.83□□□□□ -0.36
ERGIC3-201ENST00000279052 FAM184AQ8NB25 1140 aa12.83□□□□□ -0.36
ERGIC3-201ENST00000279052 KIF18AQ8NI77 898 aa12.83□□□□□ -0.36
ERGIC3-201ENST00000279052 DDX49Q9Y6V7 483 aaKnown RBP12.83□□□□□ -0.36
ERGIC3-201ENST00000279052 TCOF1Q13428 1488 aaKnown RBP12.83□□□□□ -0.36
ERGIC3-201ENST00000279052 ARID3CA6NKF2 412 aa12.83□□□□□ -0.36
ERGIC3-201ENST00000279052 SETDB1Q15047 1291 aa12.83□□□□□ -0.36
ERGIC3-201ENST00000279052 TSGA10IPQ3SY00 556 aa12.83□□□□□ -0.36
ERGIC3-201ENST00000279052 MPHOSPH9Q99550 1183 aa12.83□□□□□ -0.36
ERGIC3-201ENST00000279052 TPM3P06753 285 aa12.82□□□□□ -0.36
ERGIC3-201ENST00000279052 MAP2K2P36507 400 aa12.82□□□□□ -0.36
ERGIC3-201ENST00000279052 TTC31Q49AM3 519 aaPredicted RBP12.82□□□□□ -0.36
ERGIC3-201ENST00000279052 NPC1L1Q9UHC9 1359 aa12.82□□□□□ -0.36
ERGIC3-201ENST00000279052 KIF21AQ7Z4S6 1674 aa12.82□□□□□ -0.36
ERGIC3-201ENST00000279052 NOM1Q5C9Z4 860 aaKnown RBP12.82□□□□□ -0.36
ERGIC3-201ENST00000279052 ANKRD20A12PQ8NF67 263 aa12.82□□□□□ -0.36
ERGIC3-201ENST00000279052 HECW1Q76N89 1606 aa12.82□□□□□ -0.36
ERGIC3-201ENST00000279052 SYT10Q6XYQ8 523 aa12.81□□□□□ -0.36
ERGIC3-201ENST00000279052 SENP3Q9H4L4 574 aaPredicted RBP12.81□□□□□ -0.36
ERGIC3-201ENST00000279052 KIAA1107Q9UPP5 1409 aa12.81□□□□□ -0.36
ERGIC3-201ENST00000279052 KLHL40Q2TBA0 621 aa12.81□□□□□ -0.36
ERGIC3-201ENST00000279052 PIK3R5Q8WYR1 880 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms