RNA–Protein interactions for RNA: ENST00000278916.7

CHEK1-201, Transcript of checkpoint kinase 1, humanhuman

TSL 5 BASIC

Gene CHEK1, Length 1,712 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-201ENST00000278916 MED1Q15648 1581 aaPredicted RBP16.42■□□□□ 0.22
CHEK1-201ENST00000278916 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.42■□□□□ 0.221e-6■■■■■ 28.9
CHEK1-201ENST00000278916 ALS2Q96Q42 1657 aa16.42■□□□□ 0.22
CHEK1-201ENST00000278916 CPSF1Q10570 1443 aaKnown RBP16.42■□□□□ 0.22
CHEK1-201ENST00000278916 SLC24A1O60721 1099 aa16.42■□□□□ 0.22
CHEK1-201ENST00000278916 ADAMTS2O95450 1211 aa16.42■□□□□ 0.22
CHEK1-201ENST00000278916 CDCA8Q53HL2 280 aa16.41■□□□□ 0.22
CHEK1-201ENST00000278916 HDGFL2Q7Z4V5 671 aaPredicted RBP16.4■□□□□ 0.22
CHEK1-201ENST00000278916 ABTB2Q8N961 1025 aa16.4■□□□□ 0.22
CHEK1-201ENST00000278916 PUS7Q96PZ0 661 aaKnown RBP16.4■□□□□ 0.22
CHEK1-201ENST00000278916 KIF7Q2M1P5 1343 aa16.4■□□□□ 0.22
CHEK1-201ENST00000278916 MON2Q7Z3U7 1717 aa16.39■□□□□ 0.22
CHEK1-201ENST00000278916 ZRANB1Q9UGI0 708 aa16.39■□□□□ 0.21
CHEK1-201ENST00000278916 COL22A1Q8NFW1 1626 aaPredicted RBP16.39■□□□□ 0.21
CHEK1-201ENST00000278916 NRKQ7Z2Y5 1582 aa16.39■□□□□ 0.21
CHEK1-201ENST00000278916 SPATA31A6Q5VVP1 1343 aa16.39■□□□□ 0.21
CHEK1-201ENST00000278916 TTC21BQ7Z4L5 1316 aa16.39■□□□□ 0.21
CHEK1-201ENST00000278916 MEX3CQ5U5Q3 659 aaKnown RBP16.39■□□□□ 0.21
CHEK1-201ENST00000278916 TERF2IPQ9NYB0 399 aa16.39■□□□□ 0.21
CHEK1-201ENST00000278916 SSH2Q76I76 1423 aa16.38■□□□□ 0.21
CHEK1-201ENST00000278916 ARHGEF10O15013 1369 aa16.38■□□□□ 0.21
CHEK1-201ENST00000278916 HAP1P54257 671 aaPredicted RBP16.38■□□□□ 0.21
CHEK1-201ENST00000278916 PIK3C2AO00443 1686 aa16.38■□□□□ 0.21
CHEK1-201ENST00000278916 NME9Q86XW9 330 aa16.37■□□□□ 0.21
CHEK1-201ENST00000278916 ZNF692Q9BU19 519 aaPredicted RBP16.37■□□□□ 0.21
CHEK1-201ENST00000278916 SOX12O15370 315 aa16.36■□□□□ 0.21
CHEK1-201ENST00000278916 C8orf37Q96NL8 207 aa16.36■□□□□ 0.21
CHEK1-201ENST00000278916 ABCA3Q99758 1704 aa16.36■□□□□ 0.21
CHEK1-201ENST00000278916 ANKRD36BQ8N2N9 1353 aa16.36■□□□□ 0.21
CHEK1-201ENST00000278916 NINLQ9Y2I6 1382 aa16.36■□□□□ 0.21
CHEK1-201ENST00000278916 WASHC2AQ641Q2 1341 aa16.36■□□□□ 0.21
CHEK1-201ENST00000278916 NLRP6P59044 892 aa16.35■□□□□ 0.21
CHEK1-201ENST00000278916 CARD14Q9BXL6 1004 aa16.34■□□□□ 0.21
CHEK1-201ENST00000278916 EDC4Q6P2E9 1401 aaKnown RBP16.33■□□□□ 0.21
CHEK1-201ENST00000278916 PHF23Q9BUL5 403 aaPredicted RBP16.33■□□□□ 0.21
CHEK1-201ENST00000278916 CRYBG1Q9Y4K1 1723 aa16.33■□□□□ 0.21
CHEK1-201ENST00000278916 CCDC7Q96M83 1385 aa16.33■□□□□ 0.21
CHEK1-201ENST00000278916 PANK3Q9H999 370 aa16.33■□□□□ 0.2
CHEK1-201ENST00000278916 PHRF1Q9P1Y6 1649 aaKnown RBP16.33■□□□□ 0.2
CHEK1-201ENST00000278916 NSD3Q9BZ95 1437 aa16.32■□□□□ 0.2
CHEK1-201ENST00000278916 MARF1Q9Y4F3 1742 aaKnown RBP16.32■□□□□ 0.2
CHEK1-201ENST00000278916 ZBTB7CA1YPR0 619 aa16.31■□□□□ 0.2
CHEK1-201ENST00000278916 ZC3H6P61129 1189 aaKnown RBP16.31■□□□□ 0.2
CHEK1-201ENST00000278916 TTC21AQ8NDW8 1320 aa16.31■□□□□ 0.2
CHEK1-201ENST00000278916 NLRP13Q86W25 1043 aa16.31■□□□□ 0.2
CHEK1-201ENST00000278916 CHRNA2Q15822 529 aa16.3■□□□□ 0.2
CHEK1-201ENST00000278916 NGLY1Q96IV0 654 aa16.3■□□□□ 0.2
CHEK1-201ENST00000278916 GGNBP2Q9H3C7 697 aa16.3■□□□□ 0.2
CHEK1-201ENST00000278916 RGS17Q9UGC6 210 aaPredicted RBP16.3■□□□□ 0.2
CHEK1-201ENST00000278916 BRD4O60885 1362 aaPredicted RBP16.29■□□□□ 0.2
CHEK1-201ENST00000278916 USP19O94966 1318 aa16.29■□□□□ 0.2
CHEK1-201ENST00000278916 AFF2P51816 1311 aa16.29■□□□□ 0.2
CHEK1-201ENST00000278916 KIAA0232Q92628 1395 aa16.28■□□□□ 0.2
CHEK1-201ENST00000278916 FBLN1P23142 703 aa16.28■□□□□ 0.2
CHEK1-201ENST00000278916 CNGB1Q14028 1251 aaPredicted RBP16.28■□□□□ 0.2
CHEK1-201ENST00000278916 FAM83GA6ND36 823 aa16.28■□□□□ 0.2
CHEK1-201ENST00000278916 GCP02774 474 aa16.28■□□□□ 0.2
CHEK1-201ENST00000278916 FYB1O15117 783 aa16.27■□□□□ 0.19
CHEK1-201ENST00000278916 PRDM11Q9NQV5 511 aa16.26■□□□□ 0.19
CHEK1-201ENST00000278916 KIF20BQ96Q89 1820 aa16.26■□□□□ 0.19
CHEK1-201ENST00000278916 SLIT3O75094 1523 aa16.25■□□□□ 0.19
CHEK1-201ENST00000278916 OVOS2A0A0J9YW53 1432 aa16.25■□□□□ 0.19
CHEK1-201ENST00000278916 OVOS2Q6IE36 1432 aa16.25■□□□□ 0.19
CHEK1-201ENST00000278916 POTEAQ6S8J7 498 aa16.24■□□□□ 0.19
CHEK1-201ENST00000278916 COG3Q96JB2 828 aa16.24■□□□□ 0.19
CHEK1-201ENST00000278916 USP21Q9UK80 565 aa16.24■□□□□ 0.19
CHEK1-201ENST00000278916 PLCH1Q4KWH8 1693 aa16.24■□□□□ 0.19
CHEK1-201ENST00000278916 USP31Q70CQ4 1352 aa16.24■□□□□ 0.19
CHEK1-201ENST00000278916 NFAT5O94916 1531 aa16.23■□□□□ 0.19
CHEK1-201ENST00000278916 BTG4Q9NY30 223 aa16.22■□□□□ 0.19
CHEK1-201ENST00000278916 TNNT2P45379 298 aaPredicted RBP16.22■□□□□ 0.19
CHEK1-201ENST00000278916 CGNL1Q0VF96 1302 aa16.22■□□□□ 0.19
CHEK1-201ENST00000278916 BCL9LQ86UU0 1499 aa16.22■□□□□ 0.19
CHEK1-201ENST00000278916 USP54Q70EL1 1684 aa16.21■□□□□ 0.19
CHEK1-201ENST00000278916 FNBP4Q8N3X1 1017 aaPredicted RBP16.21■□□□□ 0.19
CHEK1-201ENST00000278916 COL14A1Q05707 1796 aaKnown RBP16.2■□□□□ 0.18
CHEK1-201ENST00000278916 SLIT2O94813 1529 aa16.2■□□□□ 0.18
CHEK1-201ENST00000278916 STRN4Q9NRL3 753 aa16.2■□□□□ 0.18
CHEK1-201ENST00000278916 KNSTRNQ9Y448 316 aa16.2■□□□□ 0.18
CHEK1-201ENST00000278916 RRS1Q15050 365 aaKnown RBP16.19■□□□□ 0.18
CHEK1-201ENST00000278916 KCNH5Q8NCM2 988 aa16.19■□□□□ 0.18
CHEK1-201ENST00000278916 ARHGEF25Q86VW2 580 aa16.19■□□□□ 0.18
CHEK1-201ENST00000278916 QTRT2Q9H974 415 aaKnown RBP16.19■□□□□ 0.18
CHEK1-201ENST00000278916 AXIN2Q9Y2T1 843 aa16.19■□□□□ 0.18
CHEK1-201ENST00000278916 LTN1O94822 1766 aa16.18■□□□□ 0.18
CHEK1-201ENST00000278916 CPDO75976 1380 aa16.18■□□□□ 0.18
CHEK1-201ENST00000278916 CAMTA1Q9Y6Y1 1673 aa16.18■□□□□ 0.18
CHEK1-201ENST00000278916 PER1O15534 1290 aaPredicted RBP16.18■□□□□ 0.18
CHEK1-201ENST00000278916 DDX10Q13206 875 aaKnown RBP16.18■□□□□ 0.18
CHEK1-201ENST00000278916 CC2D1BQ5T0F9 858 aaKnown RBP16.18■□□□□ 0.18
CHEK1-201ENST00000278916 ZNF772Q68DY9 489 aaPredicted RBP16.18■□□□□ 0.18
CHEK1-201ENST00000278916 ZNF316A6NFI3 1004 aaPredicted RBP16.17■□□□□ 0.18
CHEK1-201ENST00000278916 UNC5CLQ8IV45 518 aa16.17■□□□□ 0.18
CHEK1-201ENST00000278916 CCDC9Q9Y3X0 531 aaKnown RBP16.17■□□□□ 0.18
CHEK1-201ENST00000278916 RGPD5Q99666 1765 aa16.17■□□□□ 0.18
CHEK1-201ENST00000278916 NRAPQ86VF7 1730 aa16.17■□□□□ 0.18
CHEK1-201ENST00000278916 AMER1Q5JTC6 1135 aaPredicted RBP16.16■□□□□ 0.18
CHEK1-201ENST00000278916 LMO7Q8WWI1 1683 aa16.16■□□□□ 0.18
CHEK1-201ENST00000278916 ILDR2Q71H61 639 aa16.16■□□□□ 0.18
CHEK1-201ENST00000278916 NWD2Q9ULI1 1742 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms