RNA–Protein interactions for RNA: ENST00000274432.12

SPATA9-201, Transcript of spermatogenesis associated 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPATA9, Length 1,100 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPATA9-201ENST00000274432 PLSCR2Q9NRY7 297 aa9.52□□□□□ -0.89
SPATA9-201ENST00000274432 KDM5AP29375 1690 aaKnown RBP9.51□□□□□ -0.89
SPATA9-201ENST00000274432 MSH6P52701 1360 aa9.51□□□□□ -0.89
SPATA9-201ENST00000274432 G3V3G9 751 aa9.51□□□□□ -0.89
SPATA9-201ENST00000274432 C19orf44Q9H6X5 657 aa9.51□□□□□ -0.89
SPATA9-201ENST00000274432 ALKQ9UM73 1620 aa9.51□□□□□ -0.89
SPATA9-201ENST00000274432 RPGRIP1LQ68CZ1 1315 aa9.51□□□□□ -0.89
SPATA9-201ENST00000274432 CCDC144AA2RUR9 1427 aa9.5□□□□□ -0.89
SPATA9-201ENST00000274432 WAPLQ7Z5K2 1190 aa9.5□□□□□ -0.89
SPATA9-201ENST00000274432 DDX17Q92841 729 aaKnown RBP9.5□□□□□ -0.89
SPATA9-201ENST00000274432 TMEM121BQ9BXQ6 578 aaPredicted RBP9.5□□□□□ -0.89
SPATA9-201ENST00000274432 XIRP1Q702N8 1843 aaKnown RBP9.49□□□□□ -0.89
SPATA9-201ENST00000274432 NUTM2FA1L443 756 aa9.49□□□□□ -0.89
SPATA9-201ENST00000274432 CFAP70Q5T0N1 1121 aa9.49□□□□□ -0.89
SPATA9-201ENST00000274432 TRPM2O94759 1503 aa9.49□□□□□ -0.89
SPATA9-201ENST00000274432 CHD2O14647 1828 aaKnown RBP9.48□□□□□ -0.89
SPATA9-201ENST00000274432 KIF1BO60333 1816 aa9.48□□□□□ -0.89
SPATA9-201ENST00000274432 DCAF11Q8TEB1 546 aa9.48□□□□□ -0.89
SPATA9-201ENST00000274432 NEXMIFQ5QGS0 1516 aa9.47□□□□□ -0.89
SPATA9-201ENST00000274432 SAFB2Q14151 953 aaKnown RBP eCLIP9.47□□□□□ -0.89
SPATA9-201ENST00000274432 DPY19L2Q6NUT2 758 aa9.47□□□□□ -0.89
SPATA9-201ENST00000274432 CADPS2Q86UW7 1296 aa9.47□□□□□ -0.89
SPATA9-201ENST00000274432 EFCAB3Q8N7B9 438 aa9.47□□□□□ -0.89
SPATA9-201ENST00000274432 TSHZ2Q9NRE2 1034 aa9.47□□□□□ -0.89
SPATA9-201ENST00000274432 ST18O60284 1047 aa9.46□□□□□ -0.9
SPATA9-201ENST00000274432 NEUROD1Q13562 356 aa9.46□□□□□ -0.9
SPATA9-201ENST00000274432 NUTM2BA6NNL0 878 aaPredicted RBP9.45□□□□□ -0.9
SPATA9-201ENST00000274432 NUTM2EB1AL46 878 aaPredicted RBP9.45□□□□□ -0.9
SPATA9-201ENST00000274432 HRCP23327 699 aa9.45□□□□□ -0.9
SPATA9-201ENST00000274432 NUTM2AQ8IVF1 878 aaPredicted RBP9.45□□□□□ -0.9
SPATA9-201ENST00000274432 ORAI2Q96SN7 254 aa9.45□□□□□ -0.9
SPATA9-201ENST00000274432 SIN3AQ96ST3 1273 aa9.45□□□□□ -0.9
SPATA9-201ENST00000274432 PIK3R4Q99570 1358 aa9.45□□□□□ -0.9
SPATA9-201ENST00000274432 ANKRD30BQ9BXX2 1392 aa9.45□□□□□ -0.9
SPATA9-201ENST00000274432 ROBO2Q9HCK4 1378 aa9.45□□□□□ -0.9
SPATA9-201ENST00000274432 FAM135BQ49AJ0 1406 aa9.45□□□□□ -0.9
SPATA9-201ENST00000274432 SPATA31E1Q6ZUB1 1445 aa9.45□□□□□ -0.9
SPATA9-201ENST00000274432 BRINP3Q76B58 766 aa9.44□□□□□ -0.9
SPATA9-201ENST00000274432 VSIG10Q8N0Z9 540 aa9.44□□□□□ -0.9
SPATA9-201ENST00000274432 BOLA1Q9Y3E2 137 aa9.44□□□□□ -0.9
SPATA9-201ENST00000274432 NKTRP30414 1462 aaKnown RBP9.44□□□□□ -0.9
SPATA9-201ENST00000274432 NRXN3Q9Y4C0 1643 aa9.44□□□□□ -0.9
SPATA9-201ENST00000274432 ACIN1Q9UKV3 1341 aaKnown RBP9.43□□□□□ -0.9
SPATA9-201ENST00000274432 SOX12O15370 315 aa9.43□□□□□ -0.9
SPATA9-201ENST00000274432 C14orf93Q9H972 538 aaKnown RBP9.43□□□□□ -0.9
SPATA9-201ENST00000274432 TRAK1Q9UPV9 953 aa9.43□□□□□ -0.9
SPATA9-201ENST00000274432 NWD1Q149M9 1564 aa9.42□□□□□ -0.9
SPATA9-201ENST00000274432 SETBP1Q9Y6X0 1596 aa9.42□□□□□ -0.9
SPATA9-201ENST00000274432 PLEKHH1Q9ULM0 1364 aa9.42□□□□□ -0.9
SPATA9-201ENST00000274432 GTPBP6O43824 516 aaPredicted RBP9.42□□□□□ -0.9
SPATA9-201ENST00000274432 XPCQ01831 940 aaPredicted RBP9.42□□□□□ -0.9
SPATA9-201ENST00000274432 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.42□□□□□ -0.9
SPATA9-201ENST00000274432 ESCO1Q5FWF5 840 aa9.41□□□□□ -0.9
SPATA9-201ENST00000274432 POGKQ9P215 609 aa9.41□□□□□ -0.9
SPATA9-201ENST00000274432 RGS17Q9UGC6 210 aaPredicted RBP9.41□□□□□ -0.9
SPATA9-201ENST00000274432 ROBO1Q9Y6N7 1651 aa9.41□□□□□ -0.9
SPATA9-201ENST00000274432 PRAM1Q96QH2 718 aa9.4□□□□□ -0.9
SPATA9-201ENST00000274432 HIRIP3Q9BW71 556 aaPredicted RBP9.4□□□□□ -0.9
SPATA9-201ENST00000274432 DIP2AQ14689 1571 aa9.4□□□□□ -0.9
SPATA9-201ENST00000274432 PPLO60437 1756 aa9.4□□□□□ -0.91
SPATA9-201ENST00000274432 NCOA3Q9Y6Q9 1424 aa9.39□□□□□ -0.91
SPATA9-201ENST00000274432 FOXO3O43524 673 aa9.39□□□□□ -0.91
SPATA9-201ENST00000274432 MEX3CQ5U5Q3 659 aaKnown RBP9.39□□□□□ -0.91
SPATA9-201ENST00000274432 DHX57Q6P158 1386 aaKnown RBP9.38□□□□□ -0.91
SPATA9-201ENST00000274432 TRIM26Q12899 539 aaPredicted RBP9.38□□□□□ -0.91
SPATA9-201ENST00000274432 NBPF1Q3BBV0 1214 aa9.38□□□□□ -0.91
SPATA9-201ENST00000274432 POTEAQ6S8J7 498 aa9.38□□□□□ -0.91
SPATA9-201ENST00000274432 CDAN1Q8IWY9 1227 aa9.38□□□□□ -0.91
SPATA9-201ENST00000274432 MST1RQ04912 1400 aa9.38□□□□□ -0.91
SPATA9-201ENST00000274432 LRPPRCP42704 1394 aaKnown RBP9.37□□□□□ -0.91
SPATA9-201ENST00000274432 MINK1Q8N4C8 1332 aaPredicted RBP9.37□□□□□ -0.91
SPATA9-201ENST00000274432 L3MBTL2Q969R5 705 aa9.37□□□□□ -0.91
SPATA9-201ENST00000274432 YTHDC2Q9H6S0 1430 aaKnown RBP9.37□□□□□ -0.91
SPATA9-201ENST00000274432 MED1Q15648 1581 aaPredicted RBP9.37□□□□□ -0.91
SPATA9-201ENST00000274432 ABCC11Q96J66 1382 aa9.37□□□□□ -0.91
SPATA9-201ENST00000274432 XRN1Q8IZH2 1706 aaKnown RBP9.36□□□□□ -0.91
SPATA9-201ENST00000274432 ADAMTS2O95450 1211 aa9.36□□□□□ -0.91
SPATA9-201ENST00000274432 PMFBP1Q8TBY8 1022 aa9.36□□□□□ -0.91
SPATA9-201ENST00000274432 LRRC59Q96AG4 307 aaKnown RBP9.36□□□□□ -0.91
SPATA9-201ENST00000274432 PIK3C2GO75747 1445 aa9.36□□□□□ -0.91
SPATA9-201ENST00000274432 ADGRL3Q9HAR2 1447 aa9.36□□□□□ -0.91
SPATA9-201ENST00000274432 PHLPP1O60346 1717 aa9.36□□□□□ -0.91
SPATA9-201ENST00000274432 JCADQ9P266 1359 aa9.36□□□□□ -0.91
SPATA9-201ENST00000274432 C1orf167Q5SNV9 1468 aa9.35□□□□□ -0.91
SPATA9-201ENST00000274432 SOCS7O14512 581 aa9.35□□□□□ -0.91
SPATA9-201ENST00000274432 PHF8Q9UPP1 1060 aa9.35□□□□□ -0.91
SPATA9-201ENST00000274432 SETD1AO15047 1707 aaKnown RBP9.34□□□□□ -0.91
SPATA9-201ENST00000274432 LMOD2Q6P5Q4 547 aa9.34□□□□□ -0.91
SPATA9-201ENST00000274432 ASXL1Q8IXJ9 1541 aa9.33□□□□□ -0.92
SPATA9-201ENST00000274432 NLRP6P59044 892 aa9.33□□□□□ -0.92
SPATA9-201ENST00000274432 KRT28Q7Z3Y7 464 aa9.33□□□□□ -0.92
SPATA9-201ENST00000274432 SIRT1Q96EB6 747 aa9.33□□□□□ -0.92
SPATA9-201ENST00000274432 C8orf37Q96NL8 207 aa9.33□□□□□ -0.92
SPATA9-201ENST00000274432 PCGF6Q9BYE7 350 aa9.33□□□□□ -0.92
SPATA9-201ENST00000274432 NALCNQ8IZF0 1738 aa9.33□□□□□ -0.92
SPATA9-201ENST00000274432 PTCH1Q13635 1447 aa9.32□□□□□ -0.92
SPATA9-201ENST00000274432 PSME1Q06323 249 aa9.32□□□□□ -0.92
SPATA9-201ENST00000274432 NGLY1Q96IV0 654 aa9.32□□□□□ -0.92
SPATA9-201ENST00000274432 MS4A4AQ96JQ5 239 aa9.32□□□□□ -0.92
SPATA9-201ENST00000274432 DCCP43146 1447 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms