RNA–Protein interactions for RNA: ENST00000274254.9

SKP2-201, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene SKP2, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-201ENST00000274254 XPCQ01831 940 aaPredicted RBP23.63■■□□□ 1.37
SKP2-201ENST00000274254 TTC21BQ7Z4L5 1316 aa23.62■■□□□ 1.37
SKP2-201ENST00000274254 KNSTRNQ9Y448 316 aa23.62■■□□□ 1.37
SKP2-201ENST00000274254 SBNO1A3KN83 1393 aa23.61■■□□□ 1.37
SKP2-201ENST00000274254 SCAF1Q9H7N4 1312 aaKnown RBP23.6■■□□□ 1.37
SKP2-201ENST00000274254 AMER1Q5JTC6 1135 aaPredicted RBP23.6■■□□□ 1.37
SKP2-201ENST00000274254 TTC21AQ8NDW8 1320 aa23.6■■□□□ 1.37
SKP2-201ENST00000274254 CGNL1Q0VF96 1302 aa23.59■■□□□ 1.37
SKP2-201ENST00000274254 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.59■■□□□ 1.37
SKP2-201ENST00000274254 NPC1L1Q9UHC9 1359 aa23.58■■□□□ 1.36
SKP2-201ENST00000274254 FYB1O15117 783 aa23.56■■□□□ 1.36
SKP2-201ENST00000274254 ALS2Q96Q42 1657 aa23.56■■□□□ 1.36
SKP2-201ENST00000274254 PIK3C2AO00443 1686 aa23.55■■□□□ 1.36
SKP2-201ENST00000274254 PAK3O75914 559 aaPredicted RBP23.55■■□□□ 1.36
SKP2-201ENST00000274254 TNS3Q68CZ2 1445 aa23.55■■□□□ 1.36
SKP2-201ENST00000274254 SPATA31A3Q5VYP0 1347 aa23.55■■□□□ 1.36
SKP2-201ENST00000274254 KIF20BQ96Q89 1820 aa23.55■■□□□ 1.36
SKP2-201ENST00000274254 NSD2O96028 1365 aa23.54■■□□□ 1.36
SKP2-201ENST00000274254 PHLPP1O60346 1717 aa23.54■■□□□ 1.36
SKP2-201ENST00000274254 NME9Q86XW9 330 aa23.54■■□□□ 1.36
SKP2-201ENST00000274254 COL16A1Q07092 1604 aaPredicted RBP23.54■■□□□ 1.36
SKP2-201ENST00000274254 USP31Q70CQ4 1352 aa23.52■■□□□ 1.36
SKP2-201ENST00000274254 ABTB2Q8N961 1025 aa23.52■■□□□ 1.36
SKP2-201ENST00000274254 GGNBP2Q9H3C7 697 aa23.51■■□□□ 1.35
SKP2-201ENST00000274254 USP54Q70EL1 1684 aa23.51■■□□□ 1.35
SKP2-201ENST00000274254 OVOS2A0A0J9YW53 1432 aa23.5■■□□□ 1.35
SKP2-201ENST00000274254 OVOS2Q6IE36 1432 aa23.5■■□□□ 1.35
SKP2-201ENST00000274254 LRRC59Q96AG4 307 aaKnown RBP23.5■■□□□ 1.35
SKP2-201ENST00000274254 ZRANB1Q9UGI0 708 aa23.5■■□□□ 1.35
SKP2-201ENST00000274254 ARHGEF10O15013 1369 aa23.5■■□□□ 1.35
SKP2-201ENST00000274254 ANKRD26Q9UPS8 1709 aa23.49■■□□□ 1.35
SKP2-201ENST00000274254 CC2D1BQ5T0F9 858 aaKnown RBP23.49■■□□□ 1.35
SKP2-201ENST00000274254 DIEXFQ68CQ4 756 aaKnown RBP23.49■■□□□ 1.35
SKP2-201ENST00000274254 MARF1Q9Y4F3 1742 aaKnown RBP23.48■■□□□ 1.35
SKP2-201ENST00000274254 NLRP6P59044 892 aa23.48■■□□□ 1.35
SKP2-201ENST00000274254 NUTM2GQ5VZR2 741 aa23.46■■□□□ 1.35
SKP2-201ENST00000274254 LMOD2Q6P5Q4 547 aa23.46■■□□□ 1.35
SKP2-201ENST00000274254 NLRP13Q86W25 1043 aa23.46■■□□□ 1.35
SKP2-201ENST00000274254 COG3Q96JB2 828 aa23.46■■□□□ 1.35
SKP2-201ENST00000274254 MED1Q15648 1581 aaPredicted RBP23.45■■□□□ 1.34
SKP2-201ENST00000274254 PARD3Q8TEW0 1356 aa23.44■■□□□ 1.34
SKP2-201ENST00000274254 USP19O94966 1318 aa23.44■■□□□ 1.34
SKP2-201ENST00000274254 FBXO41Q8TF61 875 aa23.44■■□□□ 1.34
SKP2-201ENST00000274254 HSPA1LP34931 641 aa23.43■■□□□ 1.34
SKP2-201ENST00000274254 PNPLA6Q8IY17 1366 aa23.43■■□□□ 1.34
SKP2-201ENST00000274254 CNGB1Q14028 1251 aaPredicted RBP23.43■■□□□ 1.34
SKP2-201ENST00000274254 MORC1Q86VD1 984 aa23.43■■□□□ 1.34
SKP2-201ENST00000274254 COL22A1Q8NFW1 1626 aaPredicted RBP23.42■■□□□ 1.34
SKP2-201ENST00000274254 PRKRIP1Q9H875 184 aaPredicted RBP23.42■■□□□ 1.34
SKP2-201ENST00000274254 SLIT3O75094 1523 aa23.42■■□□□ 1.34
SKP2-201ENST00000274254 CRYBG1Q9Y4K1 1723 aa23.41■■□□□ 1.34
SKP2-201ENST00000274254 RALBP1Q15311 655 aa23.4■■□□□ 1.34
SKP2-201ENST00000274254 ANP32CO43423 234 aa23.39■■□□□ 1.34
SKP2-201ENST00000274254 JCADQ9P266 1359 aa23.38■■□□□ 1.33
SKP2-201ENST00000274254 SHPRHQ149N8 1683 aa23.38■■□□□ 1.33
SKP2-201ENST00000274254 PHRF1Q9P1Y6 1649 aaKnown RBP23.38■■□□□ 1.33
SKP2-201ENST00000274254 KCNH5Q8NCM2 988 aa23.37■■□□□ 1.33
SKP2-201ENST00000274254 CABLES1Q8TDN4 633 aa23.37■■□□□ 1.33
SKP2-201ENST00000274254 NFAT5O94916 1531 aa23.37■■□□□ 1.33
SKP2-201ENST00000274254 AATKQ6ZMQ8 1374 aa23.37■■□□□ 1.33
SKP2-201ENST00000274254 ABCA3Q99758 1704 aa23.37■■□□□ 1.33
SKP2-201ENST00000274254 GCP02774 474 aa23.36■■□□□ 1.33
SKP2-201ENST00000274254 TNNT2P45379 298 aaPredicted RBP23.34■■□□□ 1.33
SKP2-201ENST00000274254 FBLN1P23142 703 aa23.33■■□□□ 1.33
SKP2-201ENST00000274254 PLEKHG5O94827 1062 aa23.33■■□□□ 1.32
SKP2-201ENST00000274254 SOX12O15370 315 aa23.32■■□□□ 1.32
SKP2-201ENST00000274254 PPP2R1AP30153 589 aa23.32■■□□□ 1.32
SKP2-201ENST00000274254 MYBBP1AQ9BQG0 1328 aaKnown RBP23.31■■□□□ 1.32
SKP2-201ENST00000274254 MAP2P11137 1827 aaKnown RBP23.31■■□□□ 1.32
SKP2-201ENST00000274254 SMG6Q86US8 1419 aaKnown RBP23.29■■□□□ 1.32
SKP2-201ENST00000274254 RRS1Q15050 365 aaKnown RBP23.29■■□□□ 1.32
SKP2-201ENST00000274254 POLKQ9UBT6 870 aa23.29■■□□□ 1.32
SKP2-201ENST00000274254 CPDO75976 1380 aa23.29■■□□□ 1.32
SKP2-201ENST00000274254 ARHGEF25Q86VW2 580 aa23.28■■□□□ 1.32
SKP2-201ENST00000274254 MAP3K19Q56UN5 1328 aa23.28■■□□□ 1.32
SKP2-201ENST00000274254 SPATA31A6Q5VVP1 1343 aa23.28■■□□□ 1.32
SKP2-201ENST00000274254 HAP1P54257 671 aaPredicted RBP23.27■■□□□ 1.32
SKP2-201ENST00000274254 EMILIN1Q9Y6C2 1016 aa23.27■■□□□ 1.32
SKP2-201ENST00000274254 LTN1O94822 1766 aa23.27■■□□□ 1.31
SKP2-201ENST00000274254 MTHFSP49914 203 aa23.26■■□□□ 1.31
SKP2-201ENST00000274254 ZC3H6P61129 1189 aaKnown RBP23.26■■□□□ 1.31
SKP2-201ENST00000274254 MIER1Q8N108 512 aa23.25■■□□□ 1.31
SKP2-201ENST00000274254 KIF24Q5T7B8 1368 aa23.25■■□□□ 1.31
SKP2-201ENST00000274254 KIAA0232Q92628 1395 aa23.25■■□□□ 1.31
SKP2-201ENST00000274254 PEAK1Q9H792 1746 aa23.25■■□□□ 1.31
SKP2-201ENST00000274254 CDK12Q9NYV4 1490 aaPredicted RBP23.23■■□□□ 1.31
SKP2-201ENST00000274254 RTL1A6NKG5 1358 aa23.23■■□□□ 1.31
SKP2-201ENST00000274254 ABCC6O95255 1503 aa23.21■■□□□ 1.31
SKP2-201ENST00000274254 COL18A1P39060 1754 aa23.21■■□□□ 1.31
SKP2-201ENST00000274254 FLT4P35916 1363 aa23.21■■□□□ 1.31
SKP2-201ENST00000274254 NUTM2BA6NNL0 878 aaPredicted RBP23.21■■□□□ 1.31
SKP2-201ENST00000274254 NUTM2EB1AL46 878 aaPredicted RBP23.21■■□□□ 1.31
SKP2-201ENST00000274254 NUTM2AQ8IVF1 878 aaPredicted RBP23.21■■□□□ 1.31
SKP2-201ENST00000274254 LRP6O75581 1613 aa23.21■■□□□ 1.31
SKP2-201ENST00000274254 INSRP06213 1382 aa23.2■■□□□ 1.31
SKP2-201ENST00000274254 PPM1GO15355 546 aaPredicted RBP23.2■■□□□ 1.3
SKP2-201ENST00000274254 HOXC9P31274 260 aa23.2■■□□□ 1.3
SKP2-201ENST00000274254 AMPHP49418 695 aa23.2■■□□□ 1.3
SKP2-201ENST00000274254 IP6K1Q92551 441 aa23.2■■□□□ 1.3
SKP2-201ENST00000274254 PRDM11Q9NQV5 511 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms