RNA–Protein interactions for RNA: ENST00000273156.11

SEC22C-202, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 1 (best) BASIC

Gene SEC22C, Length 1,608 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-202ENST00000273156 RGS12O14924 1447 aa24.76■■□□□ 1.55
SEC22C-202ENST00000273156 GJD4Q96KN9 370 aaPredicted RBP24.75■■□□□ 1.55
SEC22C-202ENST00000273156 TRPM1Q7Z4N2 1603 aa24.75■■□□□ 1.55
SEC22C-202ENST00000273156 SLIT2O94813 1529 aa24.75■■□□□ 1.55
SEC22C-202ENST00000273156 UPF1Q92900 1129 aaKnown RBP eCLIP24.75■■□□□ 1.553e-7■□□□□ 10.1
SEC22C-202ENST00000273156 POLR3AO14802 1390 aaPredicted RBP24.74■■□□□ 1.55
SEC22C-202ENST00000273156 ITSN1Q15811 1721 aa24.73■■□□□ 1.55
SEC22C-202ENST00000273156 PLEKHG5O94827 1062 aa24.73■■□□□ 1.55
SEC22C-202ENST00000273156 MARF1Q9Y4F3 1742 aaKnown RBP24.73■■□□□ 1.55
SEC22C-202ENST00000273156 DDX10Q13206 875 aaKnown RBP24.72■■□□□ 1.55
SEC22C-202ENST00000273156 ACEP12821 1306 aa24.72■■□□□ 1.55
SEC22C-202ENST00000273156 EVC2Q86UK5 1308 aa24.71■■□□□ 1.55
SEC22C-202ENST00000273156 TRPM3Q9HCF6 1732 aaPredicted RBP24.7■■□□□ 1.54
SEC22C-202ENST00000273156 FAM83GA6ND36 823 aa24.68■■□□□ 1.54
SEC22C-202ENST00000273156 VPS72Q15906 364 aa24.68■■□□□ 1.54
SEC22C-202ENST00000273156 CABP2Q9NPB3 220 aa24.68■■□□□ 1.54
SEC22C-202ENST00000273156 ATAD2Q6PL18 1390 aa24.68■■□□□ 1.54
SEC22C-202ENST00000273156 BRD4O60885 1362 aaPredicted RBP24.67■■□□□ 1.54
SEC22C-202ENST00000273156 ST20-MTHFSA0A0A6YYL1 179 aa24.67■■□□□ 1.54
SEC22C-202ENST00000273156 WASHC2AQ641Q2 1341 aa24.67■■□□□ 1.54
SEC22C-202ENST00000273156 PPIP5K1Q6PFW1 1433 aa24.66■■□□□ 1.54
SEC22C-202ENST00000273156 ALS2Q96Q42 1657 aa24.66■■□□□ 1.54
SEC22C-202ENST00000273156 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.66■■□□□ 1.54
SEC22C-202ENST00000273156 CCDC7Q96M83 1385 aa24.63■■□□□ 1.53
SEC22C-202ENST00000273156 TOPAZ1Q8N9V7 1692 aa24.63■■□□□ 1.53
SEC22C-202ENST00000273156 ABTB2Q8N961 1025 aa24.63■■□□□ 1.53
SEC22C-202ENST00000273156 PRDM11Q9NQV5 511 aa24.63■■□□□ 1.53
SEC22C-202ENST00000273156 CCDC9Q9Y3X0 531 aaKnown RBP24.63■■□□□ 1.53
SEC22C-202ENST00000273156 QRICH2Q9H0J4 1663 aa24.62■■□□□ 1.53
SEC22C-202ENST00000273156 C11orf95C9JLR9 678 aaPredicted RBP24.62■■□□□ 1.53
SEC22C-202ENST00000273156 BTG4Q9NY30 223 aa24.62■■□□□ 1.53
SEC22C-202ENST00000273156 CABP1Q9NZU7 370 aa24.62■■□□□ 1.53
SEC22C-202ENST00000273156 ABCA3Q99758 1704 aa24.61■■□□□ 1.53
SEC22C-202ENST00000273156 MIER1Q8N108 512 aa24.61■■□□□ 1.53
SEC22C-202ENST00000273156 NWD2Q9ULI1 1742 aa24.6■■□□□ 1.53
SEC22C-202ENST00000273156 NLRP13Q86W25 1043 aa24.6■■□□□ 1.53
SEC22C-202ENST00000273156 SBNO2Q9Y2G9 1366 aa24.59■■□□□ 1.53
SEC22C-202ENST00000273156 KIF7Q2M1P5 1343 aa24.59■■□□□ 1.53
SEC22C-202ENST00000273156 ONECUT3O60422 494 aaPredicted RBP24.58■■□□□ 1.53
SEC22C-202ENST00000273156 CCDC125Q86Z20 511 aa24.57■■□□□ 1.52
SEC22C-202ENST00000273156 ZNF692Q9BU19 519 aaPredicted RBP24.57■■□□□ 1.52
SEC22C-202ENST00000273156 NUTM2GQ5VZR2 741 aa24.57■■□□□ 1.52
SEC22C-202ENST00000273156 COL14A1Q05707 1796 aaKnown RBP24.56■■□□□ 1.52
SEC22C-202ENST00000273156 SEPT12Q8IYM1 358 aa24.55■■□□□ 1.52
SEC22C-202ENST00000273156 GLI3P10071 1580 aa24.55■■□□□ 1.52
SEC22C-202ENST00000273156 KIAA0232Q92628 1395 aa24.55■■□□□ 1.52
SEC22C-202ENST00000273156 PLCH1Q4KWH8 1693 aa24.55■■□□□ 1.52
SEC22C-202ENST00000273156 SLC24A1O60721 1099 aa24.54■■□□□ 1.52
SEC22C-202ENST00000273156 USP6P35125 1406 aa24.54■■□□□ 1.52
SEC22C-202ENST00000273156 USP19O94966 1318 aa24.54■■□□□ 1.52
SEC22C-202ENST00000273156 ZC3H6P61129 1189 aaKnown RBP24.53■■□□□ 1.52
SEC22C-202ENST00000273156 TESK2Q96S53 571 aa24.51■■□□□ 1.51
SEC22C-202ENST00000273156 CPDO75976 1380 aa24.51■■□□□ 1.51
SEC22C-202ENST00000273156 GCP02774 474 aa24.5■■□□□ 1.51
SEC22C-202ENST00000273156 TMF1P82094 1093 aa24.5■■□□□ 1.51
SEC22C-202ENST00000273156 SPATA31A5Q5VU36 1347 aa24.5■■□□□ 1.51
SEC22C-202ENST00000273156 SPATA31A7Q8IWB4 1347 aa24.5■■□□□ 1.51
SEC22C-202ENST00000273156 NLRP6P59044 892 aa24.5■■□□□ 1.51
SEC22C-202ENST00000273156 POLR3GLQ9BT43 218 aa24.5■■□□□ 1.51
SEC22C-202ENST00000273156 CRYBG1Q9Y4K1 1723 aa24.49■■□□□ 1.51
SEC22C-202ENST00000273156 A0A0G2JS52 829 aa24.49■■□□□ 1.51
SEC22C-202ENST00000273156 MYT1Q01538 1121 aa24.49■■□□□ 1.51
SEC22C-202ENST00000273156 CHRNA2Q15822 529 aa24.49■■□□□ 1.51
SEC22C-202ENST00000273156 EVA1CP58658 441 aa24.48■■□□□ 1.51
SEC22C-202ENST00000273156 KRT27Q7Z3Y8 459 aa24.48■■□□□ 1.51
SEC22C-202ENST00000273156 PUS7Q96PZ0 661 aaKnown RBP24.48■■□□□ 1.51
SEC22C-202ENST00000273156 ANP32CO43423 234 aa24.47■■□□□ 1.51
SEC22C-202ENST00000273156 FAM98CQ17RN3 349 aaKnown RBP24.47■■□□□ 1.51
SEC22C-202ENST00000273156 SSH2Q76I76 1423 aa24.47■■□□□ 1.51
SEC22C-202ENST00000273156 TTC21AQ8NDW8 1320 aa24.46■■□□□ 1.51
SEC22C-202ENST00000273156 PHRF1Q9P1Y6 1649 aaKnown RBP24.45■■□□□ 1.5
SEC22C-202ENST00000273156 NRAPQ86VF7 1730 aa24.45■■□□□ 1.5
SEC22C-202ENST00000273156 STRN4Q9NRL3 753 aa24.45■■□□□ 1.5
SEC22C-202ENST00000273156 CDCA8Q53HL2 280 aa24.44■■□□□ 1.5
SEC22C-202ENST00000273156 TTC21BQ7Z4L5 1316 aa24.44■■□□□ 1.5
SEC22C-202ENST00000273156 SPATA31A1Q5TZJ5 1347 aa24.43■■□□□ 1.5
SEC22C-202ENST00000273156 CPSF1Q10570 1443 aaKnown RBP24.43■■□□□ 1.5
SEC22C-202ENST00000273156 EP400Q96L91 3159 aa24.43■■□□□ 1.5
SEC22C-202ENST00000273156 KCNH5Q8NCM2 988 aa24.43■■□□□ 1.5
SEC22C-202ENST00000273156 KTN1Q86UP2 1357 aaKnown RBP24.42■■□□□ 1.5
SEC22C-202ENST00000273156 SF3B2Q13435 895 aaKnown RBP24.42■■□□□ 1.5
SEC22C-202ENST00000273156 BLMP54132 1417 aaPredicted RBP24.42■■□□□ 1.5
SEC22C-202ENST00000273156 NRKQ7Z2Y5 1582 aa24.42■■□□□ 1.5
SEC22C-202ENST00000273156 HDGFL2Q7Z4V5 671 aaPredicted RBP24.4■■□□□ 1.5
SEC22C-202ENST00000273156 TMC1Q8TDI8 760 aa24.4■■□□□ 1.5
SEC22C-202ENST00000273156 TERF2IPQ9NYB0 399 aa24.39■■□□□ 1.5
SEC22C-202ENST00000273156 AATKQ6ZMQ8 1374 aa24.38■■□□□ 1.49
SEC22C-202ENST00000273156 BARGINQ6ZT62 677 aa24.38■■□□□ 1.49
SEC22C-202ENST00000273156 SLIT3O75094 1523 aa24.37■■□□□ 1.49
SEC22C-202ENST00000273156 NINLQ9Y2I6 1382 aa24.37■■□□□ 1.49
SEC22C-202ENST00000273156 THRAP3Q9Y2W1 955 aaKnown RBP24.36■■□□□ 1.49
SEC22C-202ENST00000273156 CAMTA1Q9Y6Y1 1673 aa24.35■■□□□ 1.49
SEC22C-202ENST00000273156 LARP1Q6PKG0 1096 aaKnown RBP24.35■■□□□ 1.49
SEC22C-202ENST00000273156 TCP11L2Q8N4U5 519 aa24.35■■□□□ 1.49
SEC22C-202ENST00000273156 SLC12A5Q9H2X9 1139 aa24.34■■□□□ 1.49
SEC22C-202ENST00000273156 USP35Q9P2H5 1018 aa24.34■■□□□ 1.49
SEC22C-202ENST00000273156 ZBTB7CA1YPR0 619 aa24.33■■□□□ 1.49
SEC22C-202ENST00000273156 ARHGEF25Q86VW2 580 aa24.32■■□□□ 1.48
SEC22C-202ENST00000273156 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.32■■□□□ 1.48
SEC22C-202ENST00000273156 ZRANB1Q9UGI0 708 aa24.32■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms