RNA–Protein interactions for RNA: ENST00000272793.9

UBR3-201, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UBR3, Length 8,005 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-201ENST00000272793 KIAA1328Q86T90 577 aa18.68■□□□□ 0.58
UBR3-201ENST00000272793 DZIP1Q86YF9 867 aaKnown RBP18.68■□□□□ 0.58
UBR3-201ENST00000272793 CEBPZQ03701 1054 aaKnown RBP18.68■□□□□ 0.58
UBR3-201ENST00000272793 STIM1Q13586 685 aa18.68■□□□□ 0.58
UBR3-201ENST00000272793 APBB1IPQ7Z5R6 666 aaPredicted RBP18.68■□□□□ 0.58
UBR3-201ENST00000272793 NUCB2P80303 420 aa18.67■□□□□ 0.58
UBR3-201ENST00000272793 CAVIN1Q6NZI2 390 aaKnown RBP18.67■□□□□ 0.58
UBR3-201ENST00000272793 NUTM2FA1L443 756 aa18.67■□□□□ 0.58
UBR3-201ENST00000272793 SEPT10Q9P0V9 454 aa18.66■□□□□ 0.58
UBR3-201ENST00000272793 FERP16591 822 aa18.66■□□□□ 0.58
UBR3-201ENST00000272793 LETM1O95202 739 aaPredicted RBP18.66■□□□□ 0.58
UBR3-201ENST00000272793 PRKCSHP14314 528 aaPredicted RBP18.66■□□□□ 0.58
UBR3-201ENST00000272793 GOLGA3Q08378 1498 aa18.65■□□□□ 0.58
UBR3-201ENST00000272793 EIF2S2P20042 333 aaKnown RBP18.65■□□□□ 0.58
UBR3-201ENST00000272793 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.65■□□□□ 0.58
UBR3-201ENST00000272793 GSTTP1A0A1W2PQM5 241 aa18.64■□□□□ 0.57
UBR3-201ENST00000272793 TMCO4Q5TGY1 634 aa18.64■□□□□ 0.57
UBR3-201ENST00000272793 CRACR2AQ9BSW2 395 aa18.64■□□□□ 0.57
UBR3-201ENST00000272793 WASHC4Q2M389 1173 aa18.64■□□□□ 0.57
UBR3-201ENST00000272793 PRDM10Q9NQV6 1147 aa18.64■□□□□ 0.57
UBR3-201ENST00000272793 NGDNQ8NEJ9 315 aaKnown RBP18.64■□□□□ 0.57
UBR3-201ENST00000272793 MRPS9P82933 396 aaKnown RBP18.64■□□□□ 0.57
UBR3-201ENST00000272793 UQCRHLA0A096LP55 91 aa18.63■□□□□ 0.57
UBR3-201ENST00000272793 UQCRHP07919 91 aa18.63■□□□□ 0.57
UBR3-201ENST00000272793 IFFO1Q0D2I5 559 aa18.63■□□□□ 0.57
UBR3-201ENST00000272793 TMEM87AQ8NBN3 555 aa18.63■□□□□ 0.57
UBR3-201ENST00000272793 MYO10Q9HD67 2058 aa18.63■□□□□ 0.57
UBR3-201ENST00000272793 EPB41L2O43491 1005 aaKnown RBP18.63■□□□□ 0.57
UBR3-201ENST00000272793 GTPBP4Q9BZE4 634 aaKnown RBP18.62■□□□□ 0.57
UBR3-201ENST00000272793 CFAP58Q5T655 872 aa18.62■□□□□ 0.57
UBR3-201ENST00000272793 GIGYF2Q6Y7W6 1299 aaKnown RBP18.62■□□□□ 0.57
UBR3-201ENST00000272793 TSPY26PQ9H489 355 aa18.62■□□□□ 0.57
UBR3-201ENST00000272793 MRE11P49959 708 aa18.61■□□□□ 0.57
UBR3-201ENST00000272793 NUTM2DQ5VT03 806 aaPredicted RBP18.61■□□□□ 0.57
UBR3-201ENST00000272793 E9PSI1 815 aa18.61■□□□□ 0.57
UBR3-201ENST00000272793 MPHOSPH10O00566 681 aaKnown RBP18.61■□□□□ 0.57
UBR3-201ENST00000272793 KIF3CO14782 793 aa18.61■□□□□ 0.57
UBR3-201ENST00000272793 PABPN1LA6NDY0 278 aaKnown RBP18.6■□□□□ 0.57
UBR3-201ENST00000272793 RAB3IL1Q8TBN0 382 aa18.6■□□□□ 0.57
UBR3-201ENST00000272793 TTC5Q8N0Z6 440 aa18.6■□□□□ 0.57
UBR3-201ENST00000272793 SRRTQ9BXP5 876 aaKnown RBP18.6■□□□□ 0.57
UBR3-201ENST00000272793 GCOM1H8Y6P7 765 aaPredicted RBP18.6■□□□□ 0.57
UBR3-201ENST00000272793 MYZAPP0CAP1 466 aa18.6■□□□□ 0.57
UBR3-201ENST00000272793 RRP1P56182 461 aaKnown RBP18.6■□□□□ 0.57
UBR3-201ENST00000272793 GGT6Q6P531 493 aa18.6■□□□□ 0.57
UBR3-201ENST00000272793 HOOK3Q86VS8 718 aa18.6■□□□□ 0.57
UBR3-201ENST00000272793 MICALCLQ6ZW33 695 aa18.6■□□□□ 0.57
UBR3-201ENST00000272793 CTNNBL1Q8WYA6 563 aaPredicted RBP18.6■□□□□ 0.57
UBR3-201ENST00000272793 G3BP1Q13283 466 aaKnown RBP eCLIP18.6■□□□□ 0.57
UBR3-201ENST00000272793 SART3Q15020 963 aaKnown RBP18.59■□□□□ 0.57
UBR3-201ENST00000272793 FANCIQ9NVI1 1328 aa18.59■□□□□ 0.57
UBR3-201ENST00000272793 TRERF1Q96PN7 1200 aa18.59■□□□□ 0.57
UBR3-201ENST00000272793 TRAK2O60296 914 aa18.59■□□□□ 0.57
UBR3-201ENST00000272793 ERC1Q8IUD2 1116 aa18.59■□□□□ 0.57
UBR3-201ENST00000272793 ARL1P40616 181 aaPredicted RBP18.59■□□□□ 0.57
UBR3-201ENST00000272793 PLCD3Q8N3E9 789 aa18.58■□□□□ 0.57
UBR3-201ENST00000272793 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.58■□□□□ 0.57
UBR3-201ENST00000272793 V9GYY5 206 aaPredicted RBP18.58■□□□□ 0.57
UBR3-201ENST00000272793 PKD2Q13563 968 aa18.58■□□□□ 0.57
UBR3-201ENST00000272793 POTEJP0CG39 1038 aa18.58■□□□□ 0.56
UBR3-201ENST00000272793 PIP4K2AP48426 406 aaPredicted RBP18.58■□□□□ 0.56
UBR3-201ENST00000272793 CCDC148Q8NFR7 591 aa18.58■□□□□ 0.56
UBR3-201ENST00000272793 CCNB3Q8WWL7 1395 aa18.57■□□□□ 0.56
UBR3-201ENST00000272793 CETN2P41208 172 aa18.57■□□□□ 0.56
UBR3-201ENST00000272793 PSMC4P43686 418 aa18.57■□□□□ 0.56
UBR3-201ENST00000272793 C6orf163Q5TEZ5 329 aa18.57■□□□□ 0.56
UBR3-201ENST00000272793 INTS3Q68E01 1043 aaKnown RBP18.57■□□□□ 0.56
UBR3-201ENST00000272793 SSX2IPQ9Y2D8 614 aa18.57■□□□□ 0.56
UBR3-201ENST00000272793 NEUROD6Q96NK8 337 aa18.57■□□□□ 0.56
UBR3-201ENST00000272793 PPP1R9BQ96SB3 815 aa18.57■□□□□ 0.56
UBR3-201ENST00000272793 FEZ2Q9UHY8 353 aaPredicted RBP18.56■□□□□ 0.56
UBR3-201ENST00000272793 ZKSCAN2Q63HK3 967 aa18.56■□□□□ 0.56
UBR3-201ENST00000272793 ZFP91Q96JP5 570 aaPredicted RBP18.56■□□□□ 0.56
UBR3-201ENST00000272793 DRC1Q96MC2 740 aa18.56■□□□□ 0.56
UBR3-201ENST00000272793 TAF4BQ92750 862 aa18.56■□□□□ 0.56
UBR3-201ENST00000272793 CCDC178Q5BJE1 867 aa18.56■□□□□ 0.56
UBR3-201ENST00000272793 DNAI2Q9GZS0 605 aa18.56■□□□□ 0.56
UBR3-201ENST00000272793 PPP1R1BQ9UD71 204 aaPredicted RBP18.56■□□□□ 0.56
UBR3-201ENST00000272793 C22orf23Q9BZE7 217 aa18.55■□□□□ 0.56
UBR3-201ENST00000272793 CHMP4BP1P59074 171 aa18.55■□□□□ 0.56
UBR3-201ENST00000272793 KIF7Q2M1P5 1343 aa18.55■□□□□ 0.56
UBR3-201ENST00000272793 SLC3A2P08195 630 aaKnown RBP18.55■□□□□ 0.56
UBR3-201ENST00000272793 LNPKQ9C0E8 428 aa18.55■□□□□ 0.56
UBR3-201ENST00000272793 ZNF397Q8NF99 534 aaPredicted RBP18.55■□□□□ 0.56
UBR3-201ENST00000272793 MAP9Q49MG5 647 aa18.54■□□□□ 0.56
UBR3-201ENST00000272793 TCHPQ9BT92 498 aa18.54■□□□□ 0.56
UBR3-201ENST00000272793 NOL3O60936 208 aaKnown RBP18.54■□□□□ 0.56
UBR3-201ENST00000272793 SATB1Q01826 763 aa18.54■□□□□ 0.56
UBR3-201ENST00000272793 FAM114A1Q8IWE2 563 aa18.54■□□□□ 0.56
UBR3-201ENST00000272793 MACROD2A1Z1Q3 448 aa18.53■□□□□ 0.56
UBR3-201ENST00000272793 PRPF40AO75400 957 aaKnown RBP18.53■□□□□ 0.56
UBR3-201ENST00000272793 TEFQ10587 303 aa18.53■□□□□ 0.56
UBR3-201ENST00000272793 NINLQ9Y2I6 1382 aa18.53■□□□□ 0.56
UBR3-201ENST00000272793 DACH1Q9UI36 760 aa18.53■□□□□ 0.56
UBR3-201ENST00000272793 WDR66Q8TBY9 1149 aa18.53■□□□□ 0.56
UBR3-201ENST00000272793 PSMA5P28066 241 aa18.52■□□□□ 0.56
UBR3-201ENST00000272793 NLRP13Q86W25 1043 aa18.52■□□□□ 0.56
UBR3-201ENST00000272793 TPD52P55327 224 aaPredicted RBP18.52■□□□□ 0.56
UBR3-201ENST00000272793 DDX46Q7L014 1031 aaKnown RBP18.52■□□□□ 0.56
UBR3-201ENST00000272793 POLR3GO15318 223 aaPredicted RBP18.52■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms