RNA–Protein interactions for RNA: ENST00000272238.8

ATP6V1C2-201, Transcript of ATPase H+ transporting V1 subunit C2, humanhuman

TSL 5 BASIC

Gene ATP6V1C2, Length 1,565 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1C2-201ENST00000272238 HDGFL2Q7Z4V5 671 aaPredicted RBP21.59■■□□□ 1.05
ATP6V1C2-201ENST00000272238 LRRC59Q96AG4 307 aaKnown RBP21.59■■□□□ 1.05
ATP6V1C2-201ENST00000272238 CCDC7Q96M83 1385 aa21.59■■□□□ 1.05
ATP6V1C2-201ENST00000272238 JCADQ9P266 1359 aa21.59■■□□□ 1.05
ATP6V1C2-201ENST00000272238 COL22A1Q8NFW1 1626 aaPredicted RBP21.58■■□□□ 1.05
ATP6V1C2-201ENST00000272238 TERF2IPQ9NYB0 399 aa21.58■■□□□ 1.05
ATP6V1C2-201ENST00000272238 PNPLA6Q8IY17 1366 aa21.58■■□□□ 1.05
ATP6V1C2-201ENST00000272238 ANKRD36BQ8N2N9 1353 aa21.58■■□□□ 1.05
ATP6V1C2-201ENST00000272238 WASHC2AQ641Q2 1341 aa21.58■■□□□ 1.04
ATP6V1C2-201ENST00000272238 SBNO1A3KN83 1393 aa21.57■■□□□ 1.04
ATP6V1C2-201ENST00000272238 SPATA31A3Q5VYP0 1347 aa21.57■■□□□ 1.04
ATP6V1C2-201ENST00000272238 KIF20BQ96Q89 1820 aa21.56■■□□□ 1.04
ATP6V1C2-201ENST00000272238 NUTM2GQ5VZR2 741 aa21.56■■□□□ 1.04
ATP6V1C2-201ENST00000272238 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.55■■□□□ 1.04
ATP6V1C2-201ENST00000272238 CRYBG1Q9Y4K1 1723 aa21.55■■□□□ 1.04
ATP6V1C2-201ENST00000272238 PHRF1Q9P1Y6 1649 aaKnown RBP21.54■■□□□ 1.04
ATP6V1C2-201ENST00000272238 ARHGEF10O15013 1369 aa21.54■■□□□ 1.04
ATP6V1C2-201ENST00000272238 EDC4Q6P2E9 1401 aaKnown RBP21.53■■□□□ 1.04
ATP6V1C2-201ENST00000272238 ZNF692Q9BU19 519 aaPredicted RBP21.53■■□□□ 1.04
ATP6V1C2-201ENST00000272238 MARF1Q9Y4F3 1742 aaKnown RBP21.53■■□□□ 1.04
ATP6V1C2-201ENST00000272238 SSH2Q76I76 1423 aa21.53■■□□□ 1.04
ATP6V1C2-201ENST00000272238 NSD3Q9BZ95 1437 aa21.53■■□□□ 1.04
ATP6V1C2-201ENST00000272238 MED1Q15648 1581 aaPredicted RBP21.52■■□□□ 1.04
ATP6V1C2-201ENST00000272238 NUTM2BA6NNL0 878 aaPredicted RBP21.52■■□□□ 1.04
ATP6V1C2-201ENST00000272238 NUTM2EB1AL46 878 aaPredicted RBP21.52■■□□□ 1.04
ATP6V1C2-201ENST00000272238 NUTM2AQ8IVF1 878 aaPredicted RBP21.52■■□□□ 1.04
ATP6V1C2-201ENST00000272238 TTC21BQ7Z4L5 1316 aa21.52■■□□□ 1.03
ATP6V1C2-201ENST00000272238 LRP6O75581 1613 aa21.51■■□□□ 1.03
ATP6V1C2-201ENST00000272238 ABTB2Q8N961 1025 aa21.51■■□□□ 1.03
ATP6V1C2-201ENST00000272238 CABLES1Q8TDN4 633 aa21.5■■□□□ 1.03
ATP6V1C2-201ENST00000272238 BRD4O60885 1362 aaPredicted RBP21.49■■□□□ 1.03
ATP6V1C2-201ENST00000272238 HAP1P54257 671 aaPredicted RBP21.48■■□□□ 1.03
ATP6V1C2-201ENST00000272238 NME9Q86XW9 330 aa21.48■■□□□ 1.03
ATP6V1C2-201ENST00000272238 PANK3Q9H999 370 aa21.48■■□□□ 1.03
ATP6V1C2-201ENST00000272238 SPATA31A6Q5VVP1 1343 aa21.47■■□□□ 1.03
ATP6V1C2-201ENST00000272238 TTC21AQ8NDW8 1320 aa21.47■■□□□ 1.03
ATP6V1C2-201ENST00000272238 USP54Q70EL1 1684 aa21.46■■□□□ 1.03
ATP6V1C2-201ENST00000272238 CARD14Q9BXL6 1004 aa21.45■■□□□ 1.02
ATP6V1C2-201ENST00000272238 NLRP6P59044 892 aa21.44■■□□□ 1.02
ATP6V1C2-201ENST00000272238 ZRANB1Q9UGI0 708 aa21.44■■□□□ 1.02
ATP6V1C2-201ENST00000272238 ANKRD26Q9UPS8 1709 aa21.44■■□□□ 1.02
ATP6V1C2-201ENST00000272238 SOX12O15370 315 aa21.44■■□□□ 1.02
ATP6V1C2-201ENST00000272238 ADAMTS2O95450 1211 aa21.44■■□□□ 1.02
ATP6V1C2-201ENST00000272238 MEX3CQ5U5Q3 659 aaKnown RBP21.43■■□□□ 1.02
ATP6V1C2-201ENST00000272238 SLIT3O75094 1523 aa21.41■■□□□ 1.02
ATP6V1C2-201ENST00000272238 NLRP13Q86W25 1043 aa21.41■■□□□ 1.02
ATP6V1C2-201ENST00000272238 OVOS2A0A0J9YW53 1432 aa21.41■■□□□ 1.02
ATP6V1C2-201ENST00000272238 OVOS2Q6IE36 1432 aa21.41■■□□□ 1.02
ATP6V1C2-201ENST00000272238 GGNBP2Q9H3C7 697 aa21.4■■□□□ 1.02
ATP6V1C2-201ENST00000272238 PLCH1Q4KWH8 1693 aa21.39■■□□□ 1.02
ATP6V1C2-201ENST00000272238 LTN1O94822 1766 aa21.39■■□□□ 1.02
ATP6V1C2-201ENST00000272238 USP19O94966 1318 aa21.39■■□□□ 1.01
ATP6V1C2-201ENST00000272238 CNGB1Q14028 1251 aaPredicted RBP21.39■■□□□ 1.01
ATP6V1C2-201ENST00000272238 CGNL1Q0VF96 1302 aa21.38■■□□□ 1.01
ATP6V1C2-201ENST00000272238 ZBTB7CA1YPR0 619 aa21.38■■□□□ 1.01
ATP6V1C2-201ENST00000272238 ZNF316A6NFI3 1004 aaPredicted RBP21.37■■□□□ 1.01
ATP6V1C2-201ENST00000272238 C8orf37Q96NL8 207 aa21.37■■□□□ 1.01
ATP6V1C2-201ENST00000272238 KNSTRNQ9Y448 316 aa21.37■■□□□ 1.01
ATP6V1C2-201ENST00000272238 USP31Q70CQ4 1352 aa21.36■■□□□ 1.01
ATP6V1C2-201ENST00000272238 COG3Q96JB2 828 aa21.36■■□□□ 1.01
ATP6V1C2-201ENST00000272238 NFAT5O94916 1531 aa21.36■■□□□ 1.01
ATP6V1C2-201ENST00000272238 FYB1O15117 783 aa21.36■■□□□ 1.01
ATP6V1C2-201ENST00000272238 ZC3H6P61129 1189 aaKnown RBP21.36■■□□□ 1.01
ATP6V1C2-201ENST00000272238 KIAA0232Q92628 1395 aa21.34■■□□□ 1.01
ATP6V1C2-201ENST00000272238 COL14A1Q05707 1796 aaKnown RBP21.34■■□□□ 1.01
ATP6V1C2-201ENST00000272238 GCP02774 474 aa21.34■■□□□ 1.01
ATP6V1C2-201ENST00000272238 DDX10Q13206 875 aaKnown RBP21.34■■□□□ 1.01
ATP6V1C2-201ENST00000272238 PRDM11Q9NQV5 511 aa21.31■■□□□ 1
ATP6V1C2-201ENST00000272238 CHRNA2Q15822 529 aa21.31■■□□□ 1
ATP6V1C2-201ENST00000272238 CC2D1BQ5T0F9 858 aaKnown RBP21.31■■□□□ 1
ATP6V1C2-201ENST00000272238 PHF23Q9BUL5 403 aaPredicted RBP21.31■■□□□ 1
ATP6V1C2-201ENST00000272238 RGPD5Q99666 1765 aa21.3■■□□□ 1
ATP6V1C2-201ENST00000272238 KCNH5Q8NCM2 988 aa21.3■■□□□ 1
ATP6V1C2-201ENST00000272238 TNNT2P45379 298 aaPredicted RBP21.29■■□□□ 1
ATP6V1C2-201ENST00000272238 NGLY1Q96IV0 654 aa21.29■■□□□ 1
ATP6V1C2-201ENST00000272238 NRAPQ86VF7 1730 aa21.29■■□□□ 1
ATP6V1C2-201ENST00000272238 NWD2Q9ULI1 1742 aa21.29■■□□□ 1
ATP6V1C2-201ENST00000272238 NSD2O96028 1365 aa21.29■■□□□ 1
ATP6V1C2-201ENST00000272238 LMO7Q8WWI1 1683 aa21.28■■□□□ 1
ATP6V1C2-201ENST00000272238 PER1O15534 1290 aaPredicted RBP21.28■■□□□ 1
ATP6V1C2-201ENST00000272238 FBLN1P23142 703 aa21.28■■□□□ 1
ATP6V1C2-201ENST00000272238 AMER1Q5JTC6 1135 aaPredicted RBP21.27■■□□□ 1
ATP6V1C2-201ENST00000272238 AFF2P51816 1311 aa21.27■■□□□ 1
ATP6V1C2-201ENST00000272238 MAP2P11137 1827 aaKnown RBP21.27■□□□□ 0.99
ATP6V1C2-201ENST00000272238 CPDO75976 1380 aa21.26■□□□□ 0.99
ATP6V1C2-201ENST00000272238 COL18A1P39060 1754 aa21.25■□□□□ 0.99
ATP6V1C2-201ENST00000272238 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.25■□□□□ 0.99
ATP6V1C2-201ENST00000272238 FAM83GA6ND36 823 aa21.25■□□□□ 0.99
ATP6V1C2-201ENST00000272238 RRS1Q15050 365 aaKnown RBP21.25■□□□□ 0.99
ATP6V1C2-201ENST00000272238 PEAK1Q9H792 1746 aa21.25■□□□□ 0.99
ATP6V1C2-201ENST00000272238 SLIT2O94813 1529 aa21.25■□□□□ 0.99
ATP6V1C2-201ENST00000272238 MORC1Q86VD1 984 aa21.24■□□□□ 0.99
ATP6V1C2-201ENST00000272238 BTG4Q9NY30 223 aa21.23■□□□□ 0.99
ATP6V1C2-201ENST00000272238 CAMTA1Q9Y6Y1 1673 aa21.22■□□□□ 0.99
ATP6V1C2-201ENST00000272238 USP21Q9UK80 565 aa21.22■□□□□ 0.99
ATP6V1C2-201ENST00000272238 MAP3K19Q56UN5 1328 aa21.21■□□□□ 0.99
ATP6V1C2-201ENST00000272238 ARHGEF25Q86VW2 580 aa21.21■□□□□ 0.99
ATP6V1C2-201ENST00000272238 BCL9LQ86UU0 1499 aa21.2■□□□□ 0.98
ATP6V1C2-201ENST00000272238 ABCC6O95255 1503 aa21.2■□□□□ 0.98
ATP6V1C2-201ENST00000272238 PPM1GO15355 546 aaPredicted RBP21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms