RNA–Protein interactions for RNA: ENST00000269571.9

ERBB2-201, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERBB2, Length 4,545 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-201ENST00000269571 FAM184AQ8NB25 1140 aa14.6□□□□□ -0.07
ERBB2-201ENST00000269571 TPM4P67936 248 aa14.6□□□□□ -0.07
ERBB2-201ENST00000269571 ROCK1Q13464 1354 aa14.6□□□□□ -0.07
ERBB2-201ENST00000269571 SEC24BO95487 1268 aa14.6□□□□□ -0.07
ERBB2-201ENST00000269571 CHD1LQ86WJ1 897 aa14.6□□□□□ -0.07
ERBB2-201ENST00000269571 MBD3O95983 291 aa14.6□□□□□ -0.07
ERBB2-201ENST00000269571 HOMER1Q86YM7 354 aa14.6□□□□□ -0.07
ERBB2-201ENST00000269571 FKBP5Q13451 457 aaPredicted RBP14.59□□□□□ -0.07
ERBB2-201ENST00000269571 HDAC5Q9UQL6 1122 aa14.59□□□□□ -0.07
ERBB2-201ENST00000269571 MAP3K1Q13233 1512 aa14.59□□□□□ -0.07
ERBB2-201ENST00000269571 TEFQ10587 303 aa14.59□□□□□ -0.07
ERBB2-201ENST00000269571 GPS2Q13227 327 aa14.59□□□□□ -0.07
ERBB2-201ENST00000269571 TMEM57Q8N5G2 664 aa14.59□□□□□ -0.07
ERBB2-201ENST00000269571 PAXIP1Q6ZW49 1069 aaPredicted RBP14.59□□□□□ -0.07
ERBB2-201ENST00000269571 SMAP1Q8IYB5 467 aaPredicted RBP14.59□□□□□ -0.07
ERBB2-201ENST00000269571 PTPN23Q9H3S7 1636 aa14.59□□□□□ -0.07
ERBB2-201ENST00000269571 RARSP54136 660 aaKnown RBP14.58□□□□□ -0.08
ERBB2-201ENST00000269571 PDCL2Q8N4E4 241 aa14.58□□□□□ -0.08
ERBB2-201ENST00000269571 TRIM5Q9C035 493 aa14.58□□□□□ -0.08
ERBB2-201ENST00000269571 PRKAR2BP31323 418 aa14.57□□□□□ -0.08
ERBB2-201ENST00000269571 SASS6Q6UVJ0 657 aa14.57□□□□□ -0.08
ERBB2-201ENST00000269571 PRAM1Q96QH2 718 aa14.57□□□□□ -0.08
ERBB2-201ENST00000269571 CCDC141Q6ZP82 1450 aa14.57□□□□□ -0.08
ERBB2-201ENST00000269571 THOC2Q8NI27 1593 aaKnown RBP14.57□□□□□ -0.08
ERBB2-201ENST00000269571 DYNC1I1O14576 645 aa14.57□□□□□ -0.08
ERBB2-201ENST00000269571 TOMM22Q9NS69 142 aa14.57□□□□□ -0.08
ERBB2-201ENST00000269571 GNAI1P63096 354 aa14.56□□□□□ -0.08
ERBB2-201ENST00000269571 CIZ1Q9ULV3 898 aaPredicted RBP14.56□□□□□ -0.08
ERBB2-201ENST00000269571 KIF3AQ9Y496 699 aa14.56□□□□□ -0.08
ERBB2-201ENST00000269571 ZKSCAN1P17029 563 aaPredicted RBP14.56□□□□□ -0.08
ERBB2-201ENST00000269571 TBC1D32Q96NH3 1257 aa14.56□□□□□ -0.08
ERBB2-201ENST00000269571 PTPRKQ15262 1439 aa14.55□□□□□ -0.08
ERBB2-201ENST00000269571 NOM1Q5C9Z4 860 aaKnown RBP14.55□□□□□ -0.08
ERBB2-201ENST00000269571 TPD52L1Q16890 204 aaPredicted RBP14.55□□□□□ -0.08
ERBB2-201ENST00000269571 NUTM2GQ5VZR2 741 aa14.55□□□□□ -0.08
ERBB2-201ENST00000269571 TXNDC2Q86VQ3 553 aa14.55□□□□□ -0.08
ERBB2-201ENST00000269571 LETM1O95202 739 aaPredicted RBP14.54□□□□□ -0.08
ERBB2-201ENST00000269571 PCDHB15Q9Y5E8 787 aa14.54□□□□□ -0.08
ERBB2-201ENST00000269571 ERBINQ96RT1 1412 aa14.54□□□□□ -0.08
ERBB2-201ENST00000269571 C9orf78Q9NZ63 289 aaPredicted RBP14.54□□□□□ -0.08
ERBB2-201ENST00000269571 CD109Q6YHK3 1445 aa14.54□□□□□ -0.08
ERBB2-201ENST00000269571 SETQ01105 290 aaPredicted RBP14.54□□□□□ -0.08
ERBB2-201ENST00000269571 SSH1Q8WYL5 1049 aa14.54□□□□□ -0.08
ERBB2-201ENST00000269571 THUMPD2Q9BTF0 503 aaKnown RBP14.54□□□□□ -0.08
ERBB2-201ENST00000269571 IRX3P78415 501 aaPredicted RBP14.53□□□□□ -0.08
ERBB2-201ENST00000269571 GCC1Q96CN9 775 aa14.53□□□□□ -0.08
ERBB2-201ENST00000269571 ERICH4A6NGS2 130 aa14.53□□□□□ -0.08
ERBB2-201ENST00000269571 TWISTNBQ3B726 338 aaPredicted RBP14.53□□□□□ -0.08
ERBB2-201ENST00000269571 TNNQ9UQP3 1299 aa14.53□□□□□ -0.08
ERBB2-201ENST00000269571 WDR63Q8IWG1 891 aa14.53□□□□□ -0.08
ERBB2-201ENST00000269571 SLC26A8Q96RN1 970 aa14.52□□□□□ -0.08
ERBB2-201ENST00000269571 SLC52A1Q9NWF4 448 aa14.52□□□□□ -0.08
ERBB2-201ENST00000269571 FMNL2Q96PY5 1086 aa14.52□□□□□ -0.09
ERBB2-201ENST00000269571 RBM27Q9P2N5 1060 aaKnown RBP14.52□□□□□ -0.09
ERBB2-201ENST00000269571 LRPPRCP42704 1394 aaKnown RBP14.52□□□□□ -0.09
ERBB2-201ENST00000269571 UPF3BQ9BZI7 483 aaKnown RBP14.51□□□□□ -0.09
ERBB2-201ENST00000269571 GDPD2Q9HCC8 539 aa14.51□□□□□ -0.09
ERBB2-201ENST00000269571 VGLL3A8MV65 326 aa14.51□□□□□ -0.09
ERBB2-201ENST00000269571 C1orf141Q5JVX7 400 aa14.51□□□□□ -0.09
ERBB2-201ENST00000269571 ZNF428Q96B54 188 aa14.51□□□□□ -0.09
ERBB2-201ENST00000269571 GTPBP4Q9BZE4 634 aaKnown RBP14.51□□□□□ -0.09
ERBB2-201ENST00000269571 TSPYL4Q9UJ04 414 aa14.51□□□□□ -0.09
ERBB2-201ENST00000269571 CEBPZQ03701 1054 aaKnown RBP14.51□□□□□ -0.09
ERBB2-201ENST00000269571 TSPYL1Q9H0U9 437 aa14.51□□□□□ -0.09
ERBB2-201ENST00000269571 CWC15Q9P013 229 aaKnown RBP14.51□□□□□ -0.09
ERBB2-201ENST00000269571 PPP4R3BQ5MIZ7 849 aa14.51□□□□□ -0.09
ERBB2-201ENST00000269571 PSME1Q06323 249 aa14.5□□□□□ -0.09
ERBB2-201ENST00000269571 GPATCH8Q9UKJ3 1502 aaKnown RBP14.5□□□□□ -0.09
ERBB2-201ENST00000269571 MAP4K4O95819 1239 aaPredicted RBP14.5□□□□□ -0.09
ERBB2-201ENST00000269571 PES1O00541 588 aaKnown RBP14.5□□□□□ -0.09
ERBB2-201ENST00000269571 IFIT2P09913 472 aaKnown RBP14.5□□□□□ -0.09
ERBB2-201ENST00000269571 RUFY2Q8WXA3 655 aa14.5□□□□□ -0.09
ERBB2-201ENST00000269571 CWC22Q9HCG8 908 aaKnown RBP14.5□□□□□ -0.09
ERBB2-201ENST00000269571 ATP10BO94823 1461 aa14.5□□□□□ -0.09
ERBB2-201ENST00000269571 NUP153P49790 1475 aaKnown RBP14.49□□□□□ -0.09
ERBB2-201ENST00000269571 ERC2O15083 957 aa14.49□□□□□ -0.09
ERBB2-201ENST00000269571 TRERF1Q96PN7 1200 aa14.49□□□□□ -0.09
ERBB2-201ENST00000269571 CALCOCO1Q9P1Z2 691 aa14.49□□□□□ -0.09
ERBB2-201ENST00000269571 SURF6O75683 361 aaKnown RBP14.49□□□□□ -0.09
ERBB2-201ENST00000269571 MNS1Q8NEH6 495 aa14.49□□□□□ -0.09
ERBB2-201ENST00000269571 RBM42Q9BTD8 480 aaKnown RBP14.49□□□□□ -0.09
ERBB2-201ENST00000269571 KIF14Q15058 1648 aa14.49□□□□□ -0.09
ERBB2-201ENST00000269571 ADGRL1O94910 1474 aa14.48□□□□□ -0.09
ERBB2-201ENST00000269571 SMARCA5O60264 1052 aaPredicted RBP14.48□□□□□ -0.09
ERBB2-201ENST00000269571 CLSTN1O94985 981 aa14.48□□□□□ -0.09
ERBB2-201ENST00000269571 CABP1Q9NZU7 370 aa14.48□□□□□ -0.09
ERBB2-201ENST00000269571 SPDYE4A6NLX3 237 aa14.48□□□□□ -0.09
ERBB2-201ENST00000269571 OFD1O75665 1012 aa14.48□□□□□ -0.09
ERBB2-201ENST00000269571 KIF20AO95235 890 aa14.47□□□□□ -0.09
ERBB2-201ENST00000269571 BAG4O95429 457 aaKnown RBP14.47□□□□□ -0.09
ERBB2-201ENST00000269571 USP25Q9UHP3 1055 aa14.47□□□□□ -0.09
ERBB2-201ENST00000269571 CALRP27797 417 aaKnown RBP14.47□□□□□ -0.09
ERBB2-201ENST00000269571 RASSF8Q8NHQ8 419 aa14.47□□□□□ -0.09
ERBB2-201ENST00000269571 CCDC94Q9BW85 323 aaPredicted RBP14.47□□□□□ -0.09
ERBB2-201ENST00000269571 TRIM27P14373 513 aa14.47□□□□□ -0.09
ERBB2-201ENST00000269571 NEXNQ0ZGT2 675 aa14.47□□□□□ -0.09
ERBB2-201ENST00000269571 SDF4Q9BRK5 362 aa14.47□□□□□ -0.09
ERBB2-201ENST00000269571 NKTRP30414 1462 aaKnown RBP14.47□□□□□ -0.09
ERBB2-201ENST00000269571 NLRP6P59044 892 aa14.47□□□□□ -0.09
ERBB2-201ENST00000269571 FBXO31Q5XUX0 539 aaPredicted RBP14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms