RNA–Protein interactions for RNA: ENST00000269347.10

RAB40B-201, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 2,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-201ENST00000269347 NUTM2FA1L443 756 aa30.45■■■□□ 2.47
RAB40B-201ENST00000269347 MAP2P11137 1827 aaKnown RBP30.45■■■□□ 2.46
RAB40B-201ENST00000269347 AKAP12Q02952 1782 aa30.45■■■□□ 2.46
RAB40B-201ENST00000269347 PHF23Q9BUL5 403 aaPredicted RBP30.45■■■□□ 2.46
RAB40B-201ENST00000269347 EID1Q9Y6B2 187 aa30.42■■■□□ 2.46
RAB40B-201ENST00000269347 CCDC61Q9Y6R9 512 aa30.42■■■□□ 2.46
RAB40B-201ENST00000269347 ADGRB2O60241 1585 aa30.42■■■□□ 2.46
RAB40B-201ENST00000269347 CRBNQ96SW2 442 aa30.41■■■□□ 2.46
RAB40B-201ENST00000269347 AMOTL2Q9Y2J4 779 aa30.41■■■□□ 2.46
RAB40B-201ENST00000269347 RBM19Q9Y4C8 960 aaKnown RBP30.41■■■□□ 2.46
RAB40B-201ENST00000269347 PNPLA6Q8IY17 1366 aa30.41■■■□□ 2.46
RAB40B-201ENST00000269347 EDC4Q6P2E9 1401 aaKnown RBP30.41■■■□□ 2.46
RAB40B-201ENST00000269347 NKTRP30414 1462 aaKnown RBP30.4■■■□□ 2.46
RAB40B-201ENST00000269347 PLEKHF1Q96S99 279 aa30.4■■■□□ 2.46
RAB40B-201ENST00000269347 POLKQ9UBT6 870 aa30.4■■■□□ 2.46
RAB40B-201ENST00000269347 U2SURPO15042 1029 aaKnown RBP30.39■■■□□ 2.46
RAB40B-201ENST00000269347 ITSN1Q15811 1721 aa30.39■■■□□ 2.46
RAB40B-201ENST00000269347 TOPAZ1Q8N9V7 1692 aa30.39■■■□□ 2.46
RAB40B-201ENST00000269347 E9PSI1 815 aa30.38■■■□□ 2.45
RAB40B-201ENST00000269347 CEP170BQ9Y4F5 1589 aaPredicted RBP30.38■■■□□ 2.45
RAB40B-201ENST00000269347 THEMISQ8N1K5 641 aaPredicted RBP30.37■■■□□ 2.45
RAB40B-201ENST00000269347 BCAR3O75815 825 aa30.37■■■□□ 2.45
RAB40B-201ENST00000269347 EMILIN1Q9Y6C2 1016 aa30.36■■■□□ 2.45
RAB40B-201ENST00000269347 TBX22Q9Y458 520 aa30.35■■■□□ 2.45
RAB40B-201ENST00000269347 RGPD8O14715 1765 aaPredicted RBP30.34■■■□□ 2.45
RAB40B-201ENST00000269347 PPM1GO15355 546 aaPredicted RBP30.34■■■□□ 2.45
RAB40B-201ENST00000269347 NGEFQ8N5V2 710 aa30.32■■■□□ 2.44
RAB40B-201ENST00000269347 NRKQ7Z2Y5 1582 aa30.32■■■□□ 2.44
RAB40B-201ENST00000269347 XRN1Q8IZH2 1706 aaKnown RBP30.31■■■□□ 2.44
RAB40B-201ENST00000269347 DIAPH1O60610 1272 aaKnown RBP30.31■■■□□ 2.44
RAB40B-201ENST00000269347 ADAMTSL3P82987 1691 aa30.3■■■□□ 2.44
RAB40B-201ENST00000269347 ACEP12821 1306 aa30.29■■■□□ 2.44
RAB40B-201ENST00000269347 RRS1Q15050 365 aaKnown RBP30.28■■■□□ 2.44
RAB40B-201ENST00000269347 CCDC27Q2M243 656 aa30.27■■■□□ 2.44
RAB40B-201ENST00000269347 PTCH1Q13635 1447 aa30.27■■■□□ 2.44
RAB40B-201ENST00000269347 TRIM35Q9UPQ4 493 aa30.27■■■□□ 2.44
RAB40B-201ENST00000269347 LRRC7Q96NW7 1537 aa30.26■■■□□ 2.44
RAB40B-201ENST00000269347 KCNA6P17658 529 aa30.25■■■□□ 2.43
RAB40B-201ENST00000269347 TMPOP42166 694 aaKnown RBP30.25■■■□□ 2.43
RAB40B-201ENST00000269347 DIP2AQ14689 1571 aa30.25■■■□□ 2.43
RAB40B-201ENST00000269347 WDR63Q8IWG1 891 aa30.24■■■□□ 2.43
RAB40B-201ENST00000269347 PLEKHG3A1L390 1219 aa30.23■■■□□ 2.43
RAB40B-201ENST00000269347 TTC21BQ7Z4L5 1316 aa30.22■■■□□ 2.43
RAB40B-201ENST00000269347 SKAP1Q86WV1 359 aa30.22■■■□□ 2.43
RAB40B-201ENST00000269347 PMFBP1Q8TBY8 1022 aa30.22■■■□□ 2.43
RAB40B-201ENST00000269347 COG3Q96JB2 828 aa30.2■■■□□ 2.43
RAB40B-201ENST00000269347 ZNF692Q9BU19 519 aaPredicted RBP30.2■■■□□ 2.43
RAB40B-201ENST00000269347 RSPH6AQ9H0K4 717 aa30.2■■■□□ 2.43
RAB40B-201ENST00000269347 USP6P35125 1406 aa30.2■■■□□ 2.43
RAB40B-201ENST00000269347 ZNF142P52746 1687 aaPredicted RBP30.19■■■□□ 2.42
RAB40B-201ENST00000269347 AATKQ6ZMQ8 1374 aa30.19■■■□□ 2.42
RAB40B-201ENST00000269347 HMOX1P09601 288 aa30.19■■■□□ 2.42
RAB40B-201ENST00000269347 IL13P35225 146 aa30.19■■■□□ 2.42
RAB40B-201ENST00000269347 DNAJC5Q9H3Z4 198 aa30.19■■■□□ 2.42
RAB40B-201ENST00000269347 TSR2Q969E8 191 aaKnown RBP30.18■■■□□ 2.42
RAB40B-201ENST00000269347 SSH2Q76I76 1423 aa30.18■■■□□ 2.42
RAB40B-201ENST00000269347 RBM33Q96EV2 1170 aaKnown RBP30.18■■■□□ 2.42
RAB40B-201ENST00000269347 PHACTR3Q96KR7 559 aa30.17■■■□□ 2.42
RAB40B-201ENST00000269347 CDK12Q9NYV4 1490 aaPredicted RBP30.17■■■□□ 2.42
RAB40B-201ENST00000269347 PRKAR2BP31323 418 aa30.16■■■□□ 2.42
RAB40B-201ENST00000269347 OVOS2A0A0J9YW53 1432 aa30.16■■■□□ 2.42
RAB40B-201ENST00000269347 OVOS2Q6IE36 1432 aa30.16■■■□□ 2.42
RAB40B-201ENST00000269347 TNNQ9UQP3 1299 aa30.15■■■□□ 2.42
RAB40B-201ENST00000269347 NCBP3Q53F19 620 aaKnown RBP30.14■■■□□ 2.42
RAB40B-201ENST00000269347 MAPK8IP3Q9UPT6 1336 aa30.14■■■□□ 2.42
RAB40B-201ENST00000269347 RARSP54136 660 aaKnown RBP30.14■■■□□ 2.41
RAB40B-201ENST00000269347 RIPK4P57078 832 aa30.14■■■□□ 2.41
RAB40B-201ENST00000269347 PEAK1Q9H792 1746 aa30.13■■■□□ 2.41
RAB40B-201ENST00000269347 CHD2O14647 1828 aaKnown RBP30.13■■■□□ 2.41
RAB40B-201ENST00000269347 BCL2L13Q9BXK5 485 aa30.13■■■□□ 2.41
RAB40B-201ENST00000269347 NALCNQ8IZF0 1738 aa30.13■■■□□ 2.41
RAB40B-201ENST00000269347 FCHSD2O94868 740 aa30.12■■■□□ 2.41
RAB40B-201ENST00000269347 FANCIQ9NVI1 1328 aa30.12■■■□□ 2.41
RAB40B-201ENST00000269347 SETD1BQ9UPS6 1966 aaKnown RBP30.09■■■□□ 2.41
RAB40B-201ENST00000269347 GOLGA6L2Q8N9W4 650 aaPredicted RBP30.08■■■□□ 2.41
RAB40B-201ENST00000269347 PANK1Q8TE04 598 aa30.08■■■□□ 2.41
RAB40B-201ENST00000269347 FMN2Q9NZ56 1722 aa30.07■■■□□ 2.4
RAB40B-201ENST00000269347 SOX12O15370 315 aa30.07■■■□□ 2.4
RAB40B-201ENST00000269347 ANKLE2Q86XL3 938 aa30.07■■■□□ 2.4
RAB40B-201ENST00000269347 KDM2BQ8NHM5 1336 aa30.06■■■□□ 2.4
RAB40B-201ENST00000269347 DLG5Q8TDM6 1919 aa30.06■■■□□ 2.4
RAB40B-201ENST00000269347 EXOSC9Q06265 439 aaKnown RBP30.05■■■□□ 2.4
RAB40B-201ENST00000269347 THUMPD2Q9BTF0 503 aaKnown RBP30.05■■■□□ 2.4
RAB40B-201ENST00000269347 PIK3C2AO00443 1686 aa30.05■■■□□ 2.4
RAB40B-201ENST00000269347 PIK3R4Q99570 1358 aa30.04■■■□□ 2.4
RAB40B-201ENST00000269347 FRAT1Q92837 279 aaPredicted RBP30.04■■■□□ 2.4
RAB40B-201ENST00000269347 RLBP1P12271 317 aa30.04■■■□□ 2.4
RAB40B-201ENST00000269347 MYH16Q9H6N6 1097 aa30.04■■■□□ 2.4
RAB40B-201ENST00000269347 AEBP1Q8IUX7 1158 aa30.03■■■□□ 2.4
RAB40B-201ENST00000269347 USP31Q70CQ4 1352 aa30.02■■■□□ 2.4
RAB40B-201ENST00000269347 MYT1Q01538 1121 aa30.02■■■□□ 2.4
RAB40B-201ENST00000269347 EIF4A2Q14240 407 aaKnown RBP30.02■■■□□ 2.4
RAB40B-201ENST00000269347 MARF1Q9Y4F3 1742 aaKnown RBP30.02■■■□□ 2.4
RAB40B-201ENST00000269347 HSP90AB2PQ58FF8 381 aa30.01■■■□□ 2.4
RAB40B-201ENST00000269347 NGDNQ8NEJ9 315 aaKnown RBP30.01■■■□□ 2.4
RAB40B-201ENST00000269347 COG6Q9Y2V7 657 aa30.01■■■□□ 2.39
RAB40B-201ENST00000269347 NFE2L2Q16236 605 aa29.98■■■□□ 2.39
RAB40B-201ENST00000269347 PDE3AQ14432 1141 aa29.96■■■□□ 2.39
RAB40B-201ENST00000269347 NUTM2GQ5VZR2 741 aa29.96■■■□□ 2.39
RAB40B-201ENST00000269347 PNNQ9H307 717 aaKnown RBP29.96■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms