RNA–Protein interactions for RNA: ENST00000269209.6

GAREM1-201, Transcript of GRB2 associated regulator of MAPK1 subtype 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GAREM1, Length 3,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAREM1-201ENST00000269209 SLC4A3P48751 1232 aa13.08□□□□□ -0.32
GAREM1-201ENST00000269209 WDR63Q8IWG1 891 aa13.08□□□□□ -0.32
GAREM1-201ENST00000269209 NGEFQ8N5V2 710 aa13.08□□□□□ -0.32
GAREM1-201ENST00000269209 MYH16Q9H6N6 1097 aa13.08□□□□□ -0.32
GAREM1-201ENST00000269209 NSD2O96028 1365 aa13.08□□□□□ -0.32
GAREM1-201ENST00000269209 SHPRHQ149N8 1683 aa13.08□□□□□ -0.32
GAREM1-201ENST00000269209 PRKAR2BP31323 418 aa13.07□□□□□ -0.32
GAREM1-201ENST00000269209 CD163L1Q9NR16 1453 aa13.07□□□□□ -0.32
GAREM1-201ENST00000269209 WASLO00401 505 aaPredicted RBP13.07□□□□□ -0.32
GAREM1-201ENST00000269209 MS4A1P11836 297 aa13.07□□□□□ -0.32
GAREM1-201ENST00000269209 FTSJ3Q8IY81 847 aaKnown RBP13.07□□□□□ -0.32
GAREM1-201ENST00000269209 NUDT16Q96DE0 195 aaKnown RBP13.07□□□□□ -0.32
GAREM1-201ENST00000269209 SMC4Q9NTJ3 1288 aa13.07□□□□□ -0.32
GAREM1-201ENST00000269209 POLKQ9UBT6 870 aa13.07□□□□□ -0.32
GAREM1-201ENST00000269209 ELL2O00472 640 aaPredicted RBP13.06□□□□□ -0.32
GAREM1-201ENST00000269209 PLEKHF1Q96S99 279 aa13.06□□□□□ -0.32
GAREM1-201ENST00000269209 TRIM35Q9UPQ4 493 aa13.06□□□□□ -0.32
GAREM1-201ENST00000269209 PHF23Q9BUL5 403 aaPredicted RBP13.05□□□□□ -0.32
GAREM1-201ENST00000269209 PPP6R1Q9UPN7 881 aa13.05□□□□□ -0.32
GAREM1-201ENST00000269209 PDE3AQ14432 1141 aa13.05□□□□□ -0.32
GAREM1-201ENST00000269209 NINLQ9Y2I6 1382 aa13.05□□□□□ -0.32
GAREM1-201ENST00000269209 ARHGEF40Q8TER5 1519 aa13.05□□□□□ -0.32
GAREM1-201ENST00000269209 PHACTR3Q96KR7 559 aa13.05□□□□□ -0.32
GAREM1-201ENST00000269209 BCL11AQ9H165 835 aa13.05□□□□□ -0.32
GAREM1-201ENST00000269209 NEFMP07197 916 aa13.04□□□□□ -0.32
GAREM1-201ENST00000269209 PCDHB15Q9Y5E8 787 aa13.04□□□□□ -0.32
GAREM1-201ENST00000269209 PPIP5K1Q6PFW1 1433 aa13.04□□□□□ -0.32
GAREM1-201ENST00000269209 LTKP29376 864 aa13.04□□□□□ -0.32
GAREM1-201ENST00000269209 IQSEC2Q5JU85 1478 aa13.04□□□□□ -0.32
GAREM1-201ENST00000269209 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.03□□□□□ -0.32
GAREM1-201ENST00000269209 TRHP20396 242 aaPredicted RBP13.03□□□□□ -0.32
GAREM1-201ENST00000269209 CCDC27Q2M243 656 aa13.02□□□□□ -0.32
GAREM1-201ENST00000269209 SSH1Q8WYL5 1049 aa13.02□□□□□ -0.32
GAREM1-201ENST00000269209 CCDC61Q9Y6R9 512 aa13.02□□□□□ -0.32
GAREM1-201ENST00000269209 ITPRIPQ8IWB1 547 aa13.02□□□□□ -0.33
GAREM1-201ENST00000269209 COG3Q96JB2 828 aa13.02□□□□□ -0.33
GAREM1-201ENST00000269209 TNRQ92752 1358 aa13.02□□□□□ -0.33
GAREM1-201ENST00000269209 PMFBP1Q8TBY8 1022 aa13.02□□□□□ -0.33
GAREM1-201ENST00000269209 HDGFP51858 240 aaKnown RBP13.01□□□□□ -0.33
GAREM1-201ENST00000269209 NLRP1Q9C000 1473 aa13.01□□□□□ -0.33
GAREM1-201ENST00000269209 FAM161AQ3B820 660 aa13.01□□□□□ -0.33
GAREM1-201ENST00000269209 C8orf34Q49A92 452 aa13.01□□□□□ -0.33
GAREM1-201ENST00000269209 DCTN1Q14203 1278 aa13□□□□□ -0.33
GAREM1-201ENST00000269209 ZKSCAN2Q63HK3 967 aa13□□□□□ -0.33
GAREM1-201ENST00000269209 NOB1Q9ULX3 412 aaKnown RBP13□□□□□ -0.33
GAREM1-201ENST00000269209 FAM83GA6ND36 823 aa13□□□□□ -0.33
GAREM1-201ENST00000269209 AGLP35573 1532 aa13□□□□□ -0.33
GAREM1-201ENST00000269209 PRR36Q9H6K5 1346 aa12.99□□□□□ -0.33
GAREM1-201ENST00000269209 TRIM27P14373 513 aa12.99□□□□□ -0.33
GAREM1-201ENST00000269209 DZIP1LQ8IYY4 767 aaKnown RBP12.99□□□□□ -0.33
GAREM1-201ENST00000269209 USP32Q8NFA0 1604 aa12.99□□□□□ -0.33
GAREM1-201ENST00000269209 ROBO2Q9HCK4 1378 aa12.99□□□□□ -0.33
GAREM1-201ENST00000269209 SPATA31D1Q6ZQQ2 1576 aa12.99□□□□□ -0.33
GAREM1-201ENST00000269209 PLEKHG5O94827 1062 aa12.99□□□□□ -0.33
GAREM1-201ENST00000269209 RSPH6AQ9H0K4 717 aa12.99□□□□□ -0.33
GAREM1-201ENST00000269209 FCHSD2O94868 740 aa12.98□□□□□ -0.33
GAREM1-201ENST00000269209 RBM33Q96EV2 1170 aaKnown RBP12.98□□□□□ -0.33
GAREM1-201ENST00000269209 DAXXQ9UER7 740 aaPredicted RBP12.97□□□□□ -0.33
GAREM1-201ENST00000269209 TMEM2Q9UHN6 1383 aa12.97□□□□□ -0.33
GAREM1-201ENST00000269209 MVPQ14764 893 aaKnown RBP12.97□□□□□ -0.33
GAREM1-201ENST00000269209 COL3A1P02461 1466 aaPredicted RBP12.97□□□□□ -0.33
GAREM1-201ENST00000269209 AEBP1Q8IUX7 1158 aa12.97□□□□□ -0.33
GAREM1-201ENST00000269209 SEC24BO95487 1268 aa12.96□□□□□ -0.33
GAREM1-201ENST00000269209 NUTM2GQ5VZR2 741 aa12.96□□□□□ -0.33
GAREM1-201ENST00000269209 TSPYL6Q8N831 410 aa12.96□□□□□ -0.33
GAREM1-201ENST00000269209 PNNQ9H307 717 aaKnown RBP12.96□□□□□ -0.34
GAREM1-201ENST00000269209 EID1Q9Y6B2 187 aa12.96□□□□□ -0.34
GAREM1-201ENST00000269209 ACEP12821 1306 aa12.95□□□□□ -0.34
GAREM1-201ENST00000269209 TMEM57Q8N5G2 664 aa12.95□□□□□ -0.34
GAREM1-201ENST00000269209 PDZRN3Q9UPQ7 1066 aa12.95□□□□□ -0.34
GAREM1-201ENST00000269209 IL13P35225 146 aa12.95□□□□□ -0.34
GAREM1-201ENST00000269209 RTL5Q5HYW3 569 aaPredicted RBP12.95□□□□□ -0.34
GAREM1-201ENST00000269209 ATF7IPQ6VMQ6 1270 aa12.95□□□□□ -0.34
GAREM1-201ENST00000269209 AMOTL2Q9Y2J4 779 aa12.95□□□□□ -0.34
GAREM1-201ENST00000269209 KIF13AQ9H1H9 1805 aa12.94□□□□□ -0.34
GAREM1-201ENST00000269209 PNPLA6Q8IY17 1366 aa12.94□□□□□ -0.34
GAREM1-201ENST00000269209 SULT6B1Q6IMI4 303 aa12.94□□□□□ -0.34
GAREM1-201ENST00000269209 NFE2L2Q16236 605 aa12.94□□□□□ -0.34
GAREM1-201ENST00000269209 HSP90AB2PQ58FF8 381 aa12.94□□□□□ -0.34
GAREM1-201ENST00000269209 CPS1P31327 1500 aa12.93□□□□□ -0.34
GAREM1-201ENST00000269209 EDC4Q6P2E9 1401 aaKnown RBP12.93□□□□□ -0.34
GAREM1-201ENST00000269209 RWDD1Q9H446 243 aaPredicted RBP12.93□□□□□ -0.34
GAREM1-201ENST00000269209 C1orf115Q9H7X2 142 aa12.93□□□□□ -0.34
GAREM1-201ENST00000269209 REREQ9P2R6 1566 aa12.92□□□□□ -0.34
GAREM1-201ENST00000269209 NGDNQ8NEJ9 315 aaKnown RBP12.92□□□□□ -0.34
GAREM1-201ENST00000269209 LRRC7Q96NW7 1537 aa12.92□□□□□ -0.34
GAREM1-201ENST00000269209 CPSF1Q10570 1443 aaKnown RBP12.92□□□□□ -0.34
GAREM1-201ENST00000269209 ATP7BP35670 1465 aa12.92□□□□□ -0.34
GAREM1-201ENST00000269209 C14orf37Q86TY3 774 aa12.92□□□□□ -0.34
GAREM1-201ENST00000269209 NRXN3Q9Y4C0 1643 aa12.92□□□□□ -0.34
GAREM1-201ENST00000269209 KRT24Q2M2I5 525 aa12.91□□□□□ -0.34
GAREM1-201ENST00000269209 MBIPQ9NS73 344 aa12.91□□□□□ -0.34
GAREM1-201ENST00000269209 MAP2P11137 1827 aaKnown RBP12.91□□□□□ -0.34
GAREM1-201ENST00000269209 MCM10Q7L590 875 aa12.91□□□□□ -0.34
GAREM1-201ENST00000269209 TTC21BQ7Z4L5 1316 aa12.91□□□□□ -0.34
GAREM1-201ENST00000269209 MED14O60244 1454 aa12.9□□□□□ -0.34
GAREM1-201ENST00000269209 DEKP35659 375 aaKnown RBP12.9□□□□□ -0.34
GAREM1-201ENST00000269209 EIF4A2Q14240 407 aaKnown RBP12.9□□□□□ -0.34
GAREM1-201ENST00000269209 ZNF692Q9BU19 519 aaPredicted RBP12.9□□□□□ -0.34
GAREM1-201ENST00000269209 ADGRB2O60241 1585 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms