RNA–Protein interactions for RNA: ENST00000266742.8

NEDD1-201, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NEDD1, Length 4,046 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-201ENST00000266742 KIF16BQ96L93 1317 aa10.42□□□□□ -0.74
NEDD1-201ENST00000266742 YTHDC2Q9H6S0 1430 aaKnown RBP10.42□□□□□ -0.74
NEDD1-201ENST00000266742 ARHGEF28Q8N1W1 1705 aaKnown RBP10.42□□□□□ -0.74
NEDD1-201ENST00000266742 CDK19Q9BWU1 502 aa10.42□□□□□ -0.74
NEDD1-201ENST00000266742 MED14O60244 1454 aa10.42□□□□□ -0.74
NEDD1-201ENST00000266742 ITPRIPQ8IWB1 547 aa10.42□□□□□ -0.74
NEDD1-201ENST00000266742 SENP3Q9H4L4 574 aaPredicted RBP10.42□□□□□ -0.74
NEDD1-201ENST00000266742 FCHSD2O94868 740 aa10.41□□□□□ -0.74
NEDD1-201ENST00000266742 ATF7IPQ6VMQ6 1270 aa10.41□□□□□ -0.74
NEDD1-201ENST00000266742 TSR2Q969E8 191 aaKnown RBP10.41□□□□□ -0.74
NEDD1-201ENST00000266742 ZNF428Q96B54 188 aa10.41□□□□□ -0.74
NEDD1-201ENST00000266742 PLEKHF1Q96S99 279 aa10.41□□□□□ -0.74
NEDD1-201ENST00000266742 CABP1Q9NZU7 370 aa10.4□□□□□ -0.74
NEDD1-201ENST00000266742 YEATS2Q9ULM3 1422 aa10.39□□□□□ -0.75
NEDD1-201ENST00000266742 HDAC1Q13547 482 aaPredicted RBP10.39□□□□□ -0.75
NEDD1-201ENST00000266742 ALDH1L2Q3SY69 923 aa10.39□□□□□ -0.75
NEDD1-201ENST00000266742 HDGFP51858 240 aaKnown RBP10.39□□□□□ -0.75
NEDD1-201ENST00000266742 SSH1Q8WYL5 1049 aa10.39□□□□□ -0.75
NEDD1-201ENST00000266742 TRIM35Q9UPQ4 493 aa10.39□□□□□ -0.75
NEDD1-201ENST00000266742 ADGRB2O60241 1585 aa10.38□□□□□ -0.75
NEDD1-201ENST00000266742 SIGLEC1Q9BZZ2 1709 aa10.38□□□□□ -0.75
NEDD1-201ENST00000266742 TRIM27P14373 513 aa10.38□□□□□ -0.75
NEDD1-201ENST00000266742 ESF1Q9H501 851 aaKnown RBP10.38□□□□□ -0.75
NEDD1-201ENST00000266742 PTPRMP28827 1452 aa10.38□□□□□ -0.75
NEDD1-201ENST00000266742 NOB1Q9ULX3 412 aaKnown RBP10.38□□□□□ -0.75
NEDD1-201ENST00000266742 TNNQ9UQP3 1299 aa10.38□□□□□ -0.75
NEDD1-201ENST00000266742 FBXO31Q5XUX0 539 aaPredicted RBP10.37□□□□□ -0.75
NEDD1-201ENST00000266742 LMOD3Q0VAK6 560 aa10.37□□□□□ -0.75
NEDD1-201ENST00000266742 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.37□□□□□ -0.75
NEDD1-201ENST00000266742 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.37□□□□□ -0.75
NEDD1-201ENST00000266742 TBC1D32Q96NH3 1257 aa10.37□□□□□ -0.75
NEDD1-201ENST00000266742 FRAT2O75474 233 aaPredicted RBP10.36□□□□□ -0.75
NEDD1-201ENST00000266742 USP19O94966 1318 aa10.36□□□□□ -0.75
NEDD1-201ENST00000266742 PNPLA6Q8IY17 1366 aa10.36□□□□□ -0.75
NEDD1-201ENST00000266742 SEC24BO95487 1268 aa10.36□□□□□ -0.75
NEDD1-201ENST00000266742 PRKAR2BP31323 418 aa10.36□□□□□ -0.75
NEDD1-201ENST00000266742 TMEM131LA2VDJ0 1609 aa10.36□□□□□ -0.75
NEDD1-201ENST00000266742 FAM69CQ0P6D2 419 aa10.36□□□□□ -0.75
NEDD1-201ENST00000266742 GNAI1P63096 354 aa10.35□□□□□ -0.75
NEDD1-201ENST00000266742 PREX1Q8TCU6 1659 aa10.35□□□□□ -0.75
NEDD1-201ENST00000266742 RICTORQ6R327 1708 aa10.35□□□□□ -0.75
NEDD1-201ENST00000266742 CYB5RLQ6IPT4 315 aa10.35□□□□□ -0.75
NEDD1-201ENST00000266742 TMEM57Q8N5G2 664 aa10.34□□□□□ -0.75
NEDD1-201ENST00000266742 SLKQ9H2G2 1235 aaPredicted RBP10.34□□□□□ -0.75
NEDD1-201ENST00000266742 COL3A1P02461 1466 aaPredicted RBP10.34□□□□□ -0.75
NEDD1-201ENST00000266742 ALKQ9UM73 1620 aa10.34□□□□□ -0.75
NEDD1-201ENST00000266742 EIF5BO60841 1220 aaKnown RBP10.34□□□□□ -0.75
NEDD1-201ENST00000266742 ATP7BP35670 1465 aa10.34□□□□□ -0.75
NEDD1-201ENST00000266742 HAP1P54257 671 aaPredicted RBP10.34□□□□□ -0.75
NEDD1-201ENST00000266742 NFE2L2Q16236 605 aa10.34□□□□□ -0.75
NEDD1-201ENST00000266742 SMC5Q8IY18 1101 aa10.34□□□□□ -0.75
NEDD1-201ENST00000266742 C22orf23Q9BZE7 217 aa10.34□□□□□ -0.75
NEDD1-201ENST00000266742 ARHGEF40Q8TER5 1519 aa10.33□□□□□ -0.76
NEDD1-201ENST00000266742 POLKQ9UBT6 870 aa10.33□□□□□ -0.76
NEDD1-201ENST00000266742 COG3Q96JB2 828 aa10.33□□□□□ -0.76
NEDD1-201ENST00000266742 ZBTB40Q9NUA8 1239 aa10.33□□□□□ -0.76
NEDD1-201ENST00000266742 MFAP1P55081 439 aaKnown RBP10.33□□□□□ -0.76
NEDD1-201ENST00000266742 ARHGAP45Q92619 1136 aa10.33□□□□□ -0.76
NEDD1-201ENST00000266742 RSPH6AQ9H0K4 717 aa10.33□□□□□ -0.76
NEDD1-201ENST00000266742 CD163L1Q9NR16 1453 aa10.33□□□□□ -0.76
NEDD1-201ENST00000266742 BRPF1P55201 1214 aaPredicted RBP10.32□□□□□ -0.76
NEDD1-201ENST00000266742 WAPLQ7Z5K2 1190 aa10.32□□□□□ -0.76
NEDD1-201ENST00000266742 CLTCQ00610 1675 aaKnown RBP10.32□□□□□ -0.76
NEDD1-201ENST00000266742 DLC1Q96QB1 1528 aa10.32□□□□□ -0.76
NEDD1-201ENST00000266742 RIMS2Q9UQ26 1411 aa10.32□□□□□ -0.76
NEDD1-201ENST00000266742 NLRP1Q9C000 1473 aa10.32□□□□□ -0.76
NEDD1-201ENST00000266742 VIRMAQ69YN4 1812 aaKnown RBP10.32□□□□□ -0.76
NEDD1-201ENST00000266742 WASLO00401 505 aaPredicted RBP10.32□□□□□ -0.76
NEDD1-201ENST00000266742 GCC1Q96CN9 775 aa10.32□□□□□ -0.76
NEDD1-201ENST00000266742 IFT57Q9NWB7 429 aa10.32□□□□□ -0.76
NEDD1-201ENST00000266742 HSCBQ8IWL3 235 aa10.31□□□□□ -0.76
NEDD1-201ENST00000266742 ZNF692Q9BU19 519 aaPredicted RBP10.31□□□□□ -0.76
NEDD1-201ENST00000266742 ANKRD26Q9UPS8 1709 aa10.31□□□□□ -0.76
NEDD1-201ENST00000266742 EDC4Q6P2E9 1401 aaKnown RBP10.31□□□□□ -0.76
NEDD1-201ENST00000266742 HMOX1P09601 288 aa10.31□□□□□ -0.76
NEDD1-201ENST00000266742 CFAP44Q96MT7 982 aa10.31□□□□□ -0.76
NEDD1-201ENST00000266742 TBC1D2Q9BYX2 928 aa10.31□□□□□ -0.76
NEDD1-201ENST00000266742 CCDC61Q9Y6R9 512 aa10.3□□□□□ -0.76
NEDD1-201ENST00000266742 MLECQ14165 292 aa10.3□□□□□ -0.76
NEDD1-201ENST00000266742 API5Q9BZZ5 524 aaKnown RBP10.3□□□□□ -0.76
NEDD1-201ENST00000266742 FAM135BQ49AJ0 1406 aa10.3□□□□□ -0.76
NEDD1-201ENST00000266742 NUCB1Q02818 461 aa10.3□□□□□ -0.76
NEDD1-201ENST00000266742 CHD1LQ86WJ1 897 aa10.3□□□□□ -0.76
NEDD1-201ENST00000266742 SIRT1Q96EB6 747 aa10.3□□□□□ -0.76
NEDD1-201ENST00000266742 AGLP35573 1532 aa10.29□□□□□ -0.76
NEDD1-201ENST00000266742 L1TD1Q5T7N2 865 aaKnown RBP10.29□□□□□ -0.76
NEDD1-201ENST00000266742 PPIP5K1Q6PFW1 1433 aa10.29□□□□□ -0.76
NEDD1-201ENST00000266742 A2ML1A8K2U0 1454 aa10.29□□□□□ -0.76
NEDD1-201ENST00000266742 NUDT16Q96DE0 195 aaKnown RBP10.29□□□□□ -0.76
NEDD1-201ENST00000266742 CHMP5Q9NZZ3 219 aa10.29□□□□□ -0.76
NEDD1-201ENST00000266742 AATKQ6ZMQ8 1374 aa10.29□□□□□ -0.76
NEDD1-201ENST00000266742 VAMP4O75379 141 aa10.28□□□□□ -0.76
NEDD1-201ENST00000266742 LNPKQ9C0E8 428 aa10.28□□□□□ -0.76
NEDD1-201ENST00000266742 CDC42BPGQ6DT37 1551 aa10.28□□□□□ -0.76
NEDD1-201ENST00000266742 IL13P35225 146 aa10.28□□□□□ -0.76
NEDD1-201ENST00000266742 TWISTNBQ3B726 338 aaPredicted RBP10.28□□□□□ -0.76
NEDD1-201ENST00000266742 ANKRD45Q5TZF3 282 aa10.28□□□□□ -0.76
NEDD1-201ENST00000266742 EMILIN1Q9Y6C2 1016 aa10.28□□□□□ -0.76
NEDD1-201ENST00000266742 MYO5BQ9ULV0 1848 aa10.28□□□□□ -0.76
NEDD1-201ENST00000266742 TXNDC2Q86VQ3 553 aa10.27□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms