RNA–Protein interactions for RNA: ENST00000266661.8

BEST3-201, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 1,876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-201ENST00000266661 COG6Q9Y2V7 657 aa16.06■□□□□ 0.16
BEST3-201ENST00000266661 COL3A1P02461 1466 aaPredicted RBP16.06■□□□□ 0.16
BEST3-201ENST00000266661 VIRMAQ69YN4 1812 aaKnown RBP16.06■□□□□ 0.16
BEST3-201ENST00000266661 RGS3P49796 1198 aa16.05■□□□□ 0.16
BEST3-201ENST00000266661 ANKLE2Q86XL3 938 aa16.05■□□□□ 0.16
BEST3-201ENST00000266661 RIMS2Q9UQ26 1411 aa16.05■□□□□ 0.16
BEST3-201ENST00000266661 SLIT1O75093 1534 aa16.05■□□□□ 0.16
BEST3-201ENST00000266661 CFAP53Q96M91 514 aa16.05■□□□□ 0.16
BEST3-201ENST00000266661 ARHGAP23Q9P227 1491 aa16.05■□□□□ 0.16
BEST3-201ENST00000266661 RLBP1P12271 317 aa16.04■□□□□ 0.16
BEST3-201ENST00000266661 MED14O60244 1454 aa16.04■□□□□ 0.16
BEST3-201ENST00000266661 MAPK8IP3Q9UPT6 1336 aa16.03■□□□□ 0.16
BEST3-201ENST00000266661 CD163L1Q9NR16 1453 aa16.03■□□□□ 0.16
BEST3-201ENST00000266661 A0A1W2PP64 1363 aa16.03■□□□□ 0.16
BEST3-201ENST00000266661 PLEKHF1Q96S99 279 aa16.03■□□□□ 0.16
BEST3-201ENST00000266661 CABP2Q9NPB3 220 aa16.03■□□□□ 0.16
BEST3-201ENST00000266661 TNNQ9UQP3 1299 aa16.03■□□□□ 0.16
BEST3-201ENST00000266661 NEUROD2Q15784 382 aa16.02■□□□□ 0.16
BEST3-201ENST00000266661 PCDHB15Q9Y5E8 787 aa16.02■□□□□ 0.16
BEST3-201ENST00000266661 SLC4A3P48751 1232 aa16.01■□□□□ 0.15
BEST3-201ENST00000266661 SLC26A8Q96RN1 970 aa16.01■□□□□ 0.15
BEST3-201ENST00000266661 EID1Q9Y6B2 187 aa16.01■□□□□ 0.15
BEST3-201ENST00000266661 NFKBIBQ15653 356 aa15.99■□□□□ 0.15
BEST3-201ENST00000266661 PMFBP1Q8TBY8 1022 aa15.99■□□□□ 0.15
BEST3-201ENST00000266661 MYH16Q9H6N6 1097 aa15.99■□□□□ 0.15
BEST3-201ENST00000266661 ANKRD26Q9UPS8 1709 aa15.99■□□□□ 0.15
BEST3-201ENST00000266661 CT47B1P0C2W7 299 aaPredicted RBP15.99■□□□□ 0.15
BEST3-201ENST00000266661 FRAT1Q92837 279 aaPredicted RBP15.99■□□□□ 0.15
BEST3-201ENST00000266661 U2AF1L5P0DN76 240 aaPredicted RBP15.98■□□□□ 0.15
BEST3-201ENST00000266661 CANXP27824 592 aaKnown RBP15.98■□□□□ 0.15
BEST3-201ENST00000266661 U2AF1Q01081 240 aaKnown RBP eCLIP15.98■□□□□ 0.15
BEST3-201ENST00000266661 ATAD2Q6PL18 1390 aa15.98■□□□□ 0.15
BEST3-201ENST00000266661 PNPLA6Q8IY17 1366 aa15.98■□□□□ 0.15
BEST3-201ENST00000266661 NPHP4O75161 1426 aaPredicted RBP15.98■□□□□ 0.15
BEST3-201ENST00000266661 SEC24BO95487 1268 aa15.97■□□□□ 0.15
BEST3-201ENST00000266661 TRIM35Q9UPQ4 493 aa15.97■□□□□ 0.15
BEST3-201ENST00000266661 NRXN3Q9Y4C0 1643 aa15.97■□□□□ 0.15
BEST3-201ENST00000266661 FYB1O15117 783 aa15.97■□□□□ 0.15
BEST3-201ENST00000266661 YTHDC2Q9H6S0 1430 aaKnown RBP15.97■□□□□ 0.15
BEST3-201ENST00000266661 TMPOP42166 694 aaKnown RBP15.95■□□□□ 0.14
BEST3-201ENST00000266661 IL16Q14005 1332 aa15.95■□□□□ 0.14
BEST3-201ENST00000266661 STRCP1A6NGW2 1772 aa15.95■□□□□ 0.14
BEST3-201ENST00000266661 MVPQ14764 893 aaKnown RBP15.95■□□□□ 0.14
BEST3-201ENST00000266661 ALKQ9UM73 1620 aa15.94■□□□□ 0.14
BEST3-201ENST00000266661 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.94■□□□□ 0.14
BEST3-201ENST00000266661 BCL2L13Q9BXK5 485 aa15.94■□□□□ 0.14
BEST3-201ENST00000266661 GGNBP2Q9H3C7 697 aa15.94■□□□□ 0.14
BEST3-201ENST00000266661 PDZRN3Q9UPQ7 1066 aa15.94■□□□□ 0.14
BEST3-201ENST00000266661 CDC42BPGQ6DT37 1551 aa15.94■□□□□ 0.14
BEST3-201ENST00000266661 ZNF335Q9H4Z2 1342 aaPredicted RBP15.93■□□□□ 0.14
BEST3-201ENST00000266661 HDGFP51858 240 aaKnown RBP15.93■□□□□ 0.14
BEST3-201ENST00000266661 PLEKHG1Q9ULL1 1385 aa15.93■□□□□ 0.14
BEST3-201ENST00000266661 SAFB2Q14151 953 aaKnown RBP eCLIP15.93■□□□□ 0.14
BEST3-201ENST00000266661 STK26Q9P289 416 aa15.93■□□□□ 0.14
BEST3-201ENST00000266661 ADAMTS13Q76LX8 1427 aa15.92■□□□□ 0.14
BEST3-201ENST00000266661 SRPK2P78362 688 aaKnown RBP15.92■□□□□ 0.14
BEST3-201ENST00000266661 ZKSCAN2Q63HK3 967 aa15.92■□□□□ 0.14
BEST3-201ENST00000266661 PRAM1Q96QH2 718 aa15.92■□□□□ 0.14
BEST3-201ENST00000266661 TERF2IPQ9NYB0 399 aa15.92■□□□□ 0.14
BEST3-201ENST00000266661 RWDD1Q9H446 243 aaPredicted RBP15.91■□□□□ 0.14
BEST3-201ENST00000266661 SETD1AO15047 1707 aaKnown RBP15.91■□□□□ 0.14
BEST3-201ENST00000266661 EXOSC9Q06265 439 aaKnown RBP15.91■□□□□ 0.14
BEST3-201ENST00000266661 TSR2Q969E8 191 aaKnown RBP15.91■□□□□ 0.14
BEST3-201ENST00000266661 RBM33Q96EV2 1170 aaKnown RBP15.91■□□□□ 0.14
BEST3-201ENST00000266661 DAXXQ9UER7 740 aaPredicted RBP15.91■□□□□ 0.14
BEST3-201ENST00000266661 DLC1Q96QB1 1528 aa15.9■□□□□ 0.14
BEST3-201ENST00000266661 DZIP1LQ8IYY4 767 aaKnown RBP15.9■□□□□ 0.14
BEST3-201ENST00000266661 MINK1Q8N4C8 1332 aaPredicted RBP15.89■□□□□ 0.13
BEST3-201ENST00000266661 CHD2O14647 1828 aaKnown RBP15.89■□□□□ 0.13
BEST3-201ENST00000266661 GSE1Q14687 1217 aa15.88■□□□□ 0.13
BEST3-201ENST00000266661 SSH1Q8WYL5 1049 aa15.88■□□□□ 0.13
BEST3-201ENST00000266661 METP08581 1390 aa15.88■□□□□ 0.13
BEST3-201ENST00000266661 TRIM27P14373 513 aa15.88■□□□□ 0.13
BEST3-201ENST00000266661 HDAC1Q13547 482 aaPredicted RBP15.88■□□□□ 0.13
BEST3-201ENST00000266661 TBC1D32Q96NH3 1257 aa15.88■□□□□ 0.13
BEST3-201ENST00000266661 CDK19Q9BWU1 502 aa15.88■□□□□ 0.13
BEST3-201ENST00000266661 KIF20BQ96Q89 1820 aa15.87■□□□□ 0.13
BEST3-201ENST00000266661 U2SURPO15042 1029 aaKnown RBP15.86■□□□□ 0.13
BEST3-201ENST00000266661 DIAPH1O60610 1272 aaKnown RBP15.86■□□□□ 0.13
BEST3-201ENST00000266661 FRAT2O75474 233 aaPredicted RBP15.86■□□□□ 0.13
BEST3-201ENST00000266661 POGKQ9P215 609 aa15.86■□□□□ 0.13
BEST3-201ENST00000266661 PTPRUQ92729 1446 aa15.86■□□□□ 0.13
BEST3-201ENST00000266661 ATF7IPQ6VMQ6 1270 aa15.85■□□□□ 0.13
BEST3-201ENST00000266661 SMC4Q9NTJ3 1288 aa15.85■□□□□ 0.13
BEST3-201ENST00000266661 TBX22Q9Y458 520 aa15.85■□□□□ 0.13
BEST3-201ENST00000266661 PPIP5K1Q6PFW1 1433 aa15.85■□□□□ 0.13
BEST3-201ENST00000266661 ATP7BP35670 1465 aa15.85■□□□□ 0.13
BEST3-201ENST00000266661 FCHSD2O94868 740 aa15.84■□□□□ 0.13
BEST3-201ENST00000266661 BRPF1P55201 1214 aaPredicted RBP15.84■□□□□ 0.13
BEST3-201ENST00000266661 HDGFL2Q7Z4V5 671 aaPredicted RBP15.84■□□□□ 0.13
BEST3-201ENST00000266661 ANTXR1Q9H6X2 564 aa15.84■□□□□ 0.13
BEST3-201ENST00000266661 CABP1Q9NZU7 370 aa15.84■□□□□ 0.13
BEST3-201ENST00000266661 FAM135BQ49AJ0 1406 aa15.84■□□□□ 0.13
BEST3-201ENST00000266661 RIPK4P57078 832 aa15.84■□□□□ 0.13
BEST3-201ENST00000266661 SMC5Q8IY18 1101 aa15.84■□□□□ 0.13
BEST3-201ENST00000266661 LRRC7Q96NW7 1537 aa15.83■□□□□ 0.13
BEST3-201ENST00000266661 RSPH6AQ9H0K4 717 aa15.83■□□□□ 0.12
BEST3-201ENST00000266661 PNNQ9H307 717 aaKnown RBP15.83■□□□□ 0.12
BEST3-201ENST00000266661 ZBTB40Q9NUA8 1239 aa15.83■□□□□ 0.12
BEST3-201ENST00000266661 DDX19BQ9UMR2 479 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms