RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 CCDC27Q2M243 656 aa21.17■□□□□ 0.98
SQLE-201ENST00000265896 ANKRD36BQ8N2N9 1353 aa21.17■□□□□ 0.98
SQLE-201ENST00000265896 FAM83GA6ND36 823 aa21.16■□□□□ 0.98
SQLE-201ENST00000265896 CD2BP2O95400 341 aaKnown RBP21.16■□□□□ 0.98
SQLE-201ENST00000265896 TRAK2O60296 914 aa21.16■□□□□ 0.98
SQLE-201ENST00000265896 HSCBQ8IWL3 235 aa21.16■□□□□ 0.98
SQLE-201ENST00000265896 DEPDC5O75140 1603 aa21.15■□□□□ 0.98
SQLE-201ENST00000265896 HSP90AA1P07900 732 aaKnown RBP21.15■□□□□ 0.98
SQLE-201ENST00000265896 EMILIN1Q9Y6C2 1016 aa21.15■□□□□ 0.98
SQLE-201ENST00000265896 NUTM2FA1L443 756 aa21.15■□□□□ 0.98
SQLE-201ENST00000265896 MLECQ14165 292 aa21.15■□□□□ 0.98
SQLE-201ENST00000265896 SBNO2Q9Y2G9 1366 aa21.15■□□□□ 0.98
SQLE-201ENST00000265896 CDK19Q9BWU1 502 aa21.15■□□□□ 0.98
SQLE-201ENST00000265896 ZBTB40Q9NUA8 1239 aa21.15■□□□□ 0.98
SQLE-201ENST00000265896 INO80Q9ULG1 1556 aaPredicted RBP21.14■□□□□ 0.98
SQLE-201ENST00000265896 GOLGA6L3A6NEY3 463 aa21.14■□□□□ 0.97
SQLE-201ENST00000265896 QRICH2Q9H0J4 1663 aa21.14■□□□□ 0.97
SQLE-201ENST00000265896 VWDEQ8N2E2 1590 aa21.14■□□□□ 0.97
SQLE-201ENST00000265896 UHRF1BP1LA0JNW5 1464 aa21.13■□□□□ 0.97
SQLE-201ENST00000265896 TULP4Q9NRJ4 1543 aa21.12■□□□□ 0.97
SQLE-201ENST00000265896 HSP90AB1P08238 724 aaKnown RBP21.12■□□□□ 0.97
SQLE-201ENST00000265896 RRS1Q15050 365 aaKnown RBP21.12■□□□□ 0.97
SQLE-201ENST00000265896 ADGRB1O14514 1584 aa21.11■□□□□ 0.97
SQLE-201ENST00000265896 KRT24Q2M2I5 525 aa21.11■□□□□ 0.97
SQLE-201ENST00000265896 TERF2IPQ9NYB0 399 aa21.11■□□□□ 0.97
SQLE-201ENST00000265896 CHD1LQ86WJ1 897 aa21.1■□□□□ 0.97
SQLE-201ENST00000265896 CHMP5Q9NZZ3 219 aa21.1■□□□□ 0.97
SQLE-201ENST00000265896 KIDINS220Q9ULH0 1771 aa21.09■□□□□ 0.97
SQLE-201ENST00000265896 HDAC1Q13547 482 aaPredicted RBP21.09■□□□□ 0.97
SQLE-201ENST00000265896 SMC5Q8IY18 1101 aa21.09■□□□□ 0.97
SQLE-201ENST00000265896 NRXN1Q9ULB1 1477 aa21.09■□□□□ 0.97
SQLE-201ENST00000265896 ADGRB3O60242 1522 aa21.08■□□□□ 0.97
SQLE-201ENST00000265896 FAM43AQ8N2R8 423 aa21.08■□□□□ 0.97
SQLE-201ENST00000265896 C16orf71Q8IYS4 520 aaPredicted RBP21.08■□□□□ 0.96
SQLE-201ENST00000265896 NME9Q86XW9 330 aa21.07■□□□□ 0.96
SQLE-201ENST00000265896 HDGFL2Q7Z4V5 671 aaPredicted RBP21.07■□□□□ 0.96
SQLE-201ENST00000265896 NUCB1Q02818 461 aa21.06■□□□□ 0.96
SQLE-201ENST00000265896 POLKQ9UBT6 870 aa21.06■□□□□ 0.96
SQLE-201ENST00000265896 KIAA1210Q9ULL0 1709 aa21.06■□□□□ 0.96
SQLE-201ENST00000265896 IPO8O15397 1037 aaKnown RBP21.06■□□□□ 0.96
SQLE-201ENST00000265896 TNPO1Q92973 898 aaKnown RBP21.06■□□□□ 0.96
SQLE-201ENST00000265896 SIRT2Q8IXJ6 389 aa21.05■□□□□ 0.96
SQLE-201ENST00000265896 C8orf58Q8NAV2 365 aa21.05■□□□□ 0.96
SQLE-201ENST00000265896 ABCA9Q8IUA7 1624 aa21.04■□□□□ 0.96
SQLE-201ENST00000265896 L1TD1Q5T7N2 865 aaKnown RBP21.04■□□□□ 0.96
SQLE-201ENST00000265896 NAP1L5Q96NT1 182 aaPredicted RBP21.03■□□□□ 0.96
SQLE-201ENST00000265896 GLI2P10070 1586 aa21.03■□□□□ 0.96
SQLE-201ENST00000265896 ABCC11Q96J66 1382 aa21.03■□□□□ 0.96
SQLE-201ENST00000265896 OTUD7AQ8TE49 926 aaPredicted RBP21.03■□□□□ 0.96
SQLE-201ENST00000265896 TBC1D9Q6ZT07 1266 aa21.03■□□□□ 0.96
SQLE-201ENST00000265896 CHAMP1Q96JM3 812 aa21.03■□□□□ 0.96
SQLE-201ENST00000265896 MBIPQ9NS73 344 aa21.03■□□□□ 0.96
SQLE-201ENST00000265896 RSPH6AQ9H0K4 717 aa21.02■□□□□ 0.96
SQLE-201ENST00000265896 ZBTB7BO15156 539 aaPredicted RBP21.02■□□□□ 0.96
SQLE-201ENST00000265896 VAMP4O75379 141 aa21.02■□□□□ 0.96
SQLE-201ENST00000265896 KIF16BQ96L93 1317 aa21.02■□□□□ 0.95
SQLE-201ENST00000265896 AAMPQ13685 434 aa21.01■□□□□ 0.95
SQLE-201ENST00000265896 GAS2L3Q86XJ1 694 aa21.01■□□□□ 0.95
SQLE-201ENST00000265896 RPGRIP1LQ68CZ1 1315 aa21.01■□□□□ 0.95
SQLE-201ENST00000265896 SMARCA5O60264 1052 aaPredicted RBP21.01■□□□□ 0.95
SQLE-201ENST00000265896 FOXD4L5Q5VV16 416 aaPredicted RBP21.01■□□□□ 0.95
SQLE-201ENST00000265896 FOXD4L4Q8WXT5 416 aaPredicted RBP21.01■□□□□ 0.95
SQLE-201ENST00000265896 ZNF692Q9BU19 519 aaPredicted RBP21.01■□□□□ 0.95
SQLE-201ENST00000265896 MIS18AQ9NYP9 233 aa21.01■□□□□ 0.95
SQLE-201ENST00000265896 PLPPR3Q6T4P5 718 aa21■□□□□ 0.95
SQLE-201ENST00000265896 SSFA2P28290 1259 aa21■□□□□ 0.95
SQLE-201ENST00000265896 IFT172Q9UG01 1749 aa20.99■□□□□ 0.95
SQLE-201ENST00000265896 VIRMAQ69YN4 1812 aaKnown RBP20.99■□□□□ 0.95
SQLE-201ENST00000265896 TWISTNBQ3B726 338 aaPredicted RBP20.99■□□□□ 0.95
SQLE-201ENST00000265896 TXNDC2Q86VQ3 553 aa20.99■□□□□ 0.95
SQLE-201ENST00000265896 AEBP1Q8IUX7 1158 aa20.99■□□□□ 0.95
SQLE-201ENST00000265896 KIF2CQ99661 725 aa20.99■□□□□ 0.95
SQLE-201ENST00000265896 CAMSAP1Q5T5Y3 1602 aa20.98■□□□□ 0.95
SQLE-201ENST00000265896 PPIP5K1Q6PFW1 1433 aa20.98■□□□□ 0.95
SQLE-201ENST00000265896 GAS2L2Q8NHY3 880 aa20.98■□□□□ 0.95
SQLE-201ENST00000265896 FRMPD1Q5SYB0 1578 aa20.98■□□□□ 0.95
SQLE-201ENST00000265896 NCLP19338 710 aaKnown RBP20.97■□□□□ 0.95
SQLE-201ENST00000265896 MRPL50Q8N5N7 158 aaKnown RBP20.97■□□□□ 0.95
SQLE-201ENST00000265896 TPRNQ4KMQ1 711 aa20.96■□□□□ 0.95
SQLE-201ENST00000265896 POGZQ7Z3K3 1410 aa20.96■□□□□ 0.95
SQLE-201ENST00000265896 FCHSD2O94868 740 aa20.96■□□□□ 0.95
SQLE-201ENST00000265896 GRPEL1Q9HAV7 217 aa20.96■□□□□ 0.95
SQLE-201ENST00000265896 YEATS2Q9ULM3 1422 aa20.96■□□□□ 0.95
SQLE-201ENST00000265896 MYO3AQ8NEV4 1616 aa20.96■□□□□ 0.95
SQLE-201ENST00000265896 MCM10Q7L590 875 aa20.95■□□□□ 0.94
SQLE-201ENST00000265896 ABCC3O15438 1527 aa20.95■□□□□ 0.94
SQLE-201ENST00000265896 PPLO60437 1756 aa20.95■□□□□ 0.94
SQLE-201ENST00000265896 FSD2A1L4K1 749 aa20.95■□□□□ 0.94
SQLE-201ENST00000265896 CT47B1P0C2W7 299 aaPredicted RBP20.95■□□□□ 0.94
SQLE-201ENST00000265896 NFE2L2Q16236 605 aa20.95■□□□□ 0.94
SQLE-201ENST00000265896 TSHZ3Q63HK5 1081 aa20.95■□□□□ 0.94
SQLE-201ENST00000265896 ARAP3Q8WWN8 1544 aa20.95■□□□□ 0.94
SQLE-201ENST00000265896 SETBP1Q9Y6X0 1596 aa20.94■□□□□ 0.94
SQLE-201ENST00000265896 NSD2O96028 1365 aa20.94■□□□□ 0.94
SQLE-201ENST00000265896 PKP1Q13835 747 aa20.94■□□□□ 0.94
SQLE-201ENST00000265896 GSPT1P15170 499 aaKnown RBP20.94■□□□□ 0.94
SQLE-201ENST00000265896 ERBB4Q15303 1308 aa20.93■□□□□ 0.94
SQLE-201ENST00000265896 NOL8Q76FK4 1167 aaKnown RBP20.92■□□□□ 0.94
SQLE-201ENST00000265896 NECTIN2Q92692 538 aa20.92■□□□□ 0.94
SQLE-201ENST00000265896 SIGLEC1Q9BZZ2 1709 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms