RNA–Protein interactions for RNA: ENST00000265562.4

PTPN23-201, Transcript of protein tyrosine phosphatase, non-receptor type 23, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN23, Length 5,244 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN23-201ENST00000265562 TNMDQ9H2S6 317 aa16.7■□□□□ 0.26
PTPN23-201ENST00000265562 ANKRD50Q9ULJ7 1429 aa16.7■□□□□ 0.26
PTPN23-201ENST00000265562 AEBP1Q8IUX7 1158 aa16.7■□□□□ 0.26
PTPN23-201ENST00000265562 PDCL2Q8N4E4 241 aa16.7■□□□□ 0.26
PTPN23-201ENST00000265562 CCDC191Q8NCU4 936 aa16.7■□□□□ 0.26
PTPN23-201ENST00000265562 ZNF396Q96N95 335 aaPredicted RBP16.7■□□□□ 0.26
PTPN23-201ENST00000265562 SURF6O75683 361 aaKnown RBP16.69■□□□□ 0.26
PTPN23-201ENST00000265562 CT47B1P0C2W7 299 aaPredicted RBP16.69■□□□□ 0.26
PTPN23-201ENST00000265562 TAF3Q5VWG9 929 aa16.69■□□□□ 0.26
PTPN23-201ENST00000265562 NBPF8Q3BBV2 869 aa16.68■□□□□ 0.26
PTPN23-201ENST00000265562 CHD1LQ86WJ1 897 aa16.68■□□□□ 0.26
PTPN23-201ENST00000265562 SMARCE1Q969G3 411 aa16.68■□□□□ 0.26
PTPN23-201ENST00000265562 AXDND1Q5T1B0 1012 aaPredicted RBP16.68■□□□□ 0.26
PTPN23-201ENST00000265562 NCOA2Q15596 1464 aa16.68■□□□□ 0.26
PTPN23-201ENST00000265562 PRM3Q9NNZ6 103 aa16.68■□□□□ 0.26
PTPN23-201ENST00000265562 FILIP1LQ4L180 1135 aa16.67■□□□□ 0.26
PTPN23-201ENST00000265562 AMOTL1Q8IY63 956 aa16.67■□□□□ 0.26
PTPN23-201ENST00000265562 FYCO1Q9BQS8 1478 aa16.67■□□□□ 0.26
PTPN23-201ENST00000265562 WDR63Q8IWG1 891 aa16.67■□□□□ 0.26
PTPN23-201ENST00000265562 TSR2Q969E8 191 aaKnown RBP16.67■□□□□ 0.26
PTPN23-201ENST00000265562 HIP1O00291 1037 aa16.67■□□□□ 0.26
PTPN23-201ENST00000265562 KRT85P78386 507 aa16.67■□□□□ 0.26
PTPN23-201ENST00000265562 TWISTNBQ3B726 338 aaPredicted RBP16.67■□□□□ 0.26
PTPN23-201ENST00000265562 ATF7IPQ6VMQ6 1270 aa16.67■□□□□ 0.26
PTPN23-201ENST00000265562 TSPYL1Q9H0U9 437 aa16.67■□□□□ 0.26
PTPN23-201ENST00000265562 G3V3G9 751 aa16.66■□□□□ 0.26
PTPN23-201ENST00000265562 DCAF8Q5TAQ9 597 aa16.66■□□□□ 0.26
PTPN23-201ENST00000265562 RAD54L2Q9Y4B4 1467 aa16.66■□□□□ 0.26
PTPN23-201ENST00000265562 WASHC4Q2M389 1173 aa16.66■□□□□ 0.26
PTPN23-201ENST00000265562 NEUROD6Q96NK8 337 aa16.66■□□□□ 0.26
PTPN23-201ENST00000265562 PDCL3Q9H2J4 239 aa16.66■□□□□ 0.26
PTPN23-201ENST00000265562 STK38Q15208 465 aa16.66■□□□□ 0.26
PTPN23-201ENST00000265562 CYP46A1Q9Y6A2 500 aa16.66■□□□□ 0.26
PTPN23-201ENST00000265562 WDR97A6NE52 1622 aa16.65■□□□□ 0.26
PTPN23-201ENST00000265562 SERPINC1P01008 464 aa16.65■□□□□ 0.26
PTPN23-201ENST00000265562 CEBPZQ03701 1054 aaKnown RBP16.65■□□□□ 0.26
PTPN23-201ENST00000265562 SCAPERQ9BY12 1400 aa16.65■□□□□ 0.26
PTPN23-201ENST00000265562 CASKIN1Q8WXD9 1431 aa16.64■□□□□ 0.25
PTPN23-201ENST00000265562 ERLIN1O75477 346 aa16.64■□□□□ 0.25
PTPN23-201ENST00000265562 GNAI2P04899 355 aa16.64■□□□□ 0.25
PTPN23-201ENST00000265562 SYCE3A1L190 88 aa16.64■□□□□ 0.25
PTPN23-201ENST00000265562 BRMS1Q9HCU9 246 aa16.64■□□□□ 0.25
PTPN23-201ENST00000265562 EIF3JO75822 258 aaKnown RBP16.64■□□□□ 0.25
PTPN23-201ENST00000265562 OFD1O75665 1012 aa16.63■□□□□ 0.25
PTPN23-201ENST00000265562 XBP1P17861 261 aa16.63■□□□□ 0.25
PTPN23-201ENST00000265562 CABP2Q9NPB3 220 aa16.63■□□□□ 0.25
PTPN23-201ENST00000265562 PRKAR2BP31323 418 aa16.63■□□□□ 0.25
PTPN23-201ENST00000265562 CCDC30Q5VVM6 783 aa16.63■□□□□ 0.25
PTPN23-201ENST00000265562 ANKRD1Q15327 319 aa16.63■□□□□ 0.25
PTPN23-201ENST00000265562 NOL10Q9BSC4 688 aaKnown RBP16.63■□□□□ 0.25
PTPN23-201ENST00000265562 DHX16O60231 1041 aaKnown RBP16.63■□□□□ 0.25
PTPN23-201ENST00000265562 RIC3Q7Z5B4 369 aa16.62■□□□□ 0.25
PTPN23-201ENST00000265562 LARP1BQ659C4 914 aaKnown RBP16.62■□□□□ 0.25
PTPN23-201ENST00000265562 NUP62CLQ9H1M0 184 aa16.62■□□□□ 0.25
PTPN23-201ENST00000265562 ERICH4A6NGS2 130 aa16.61■□□□□ 0.25
PTPN23-201ENST00000265562 NBPF1Q3BBV0 1214 aa16.61■□□□□ 0.25
PTPN23-201ENST00000265562 LRRCC1Q9C099 1032 aa16.61■□□□□ 0.25
PTPN23-201ENST00000265562 KIAA0754O94854 1291 aa16.61■□□□□ 0.25
PTPN23-201ENST00000265562 WWC1Q8IX03 1113 aa16.61■□□□□ 0.25
PTPN23-201ENST00000265562 UBE2Q2Q8WVN8 375 aa16.61■□□□□ 0.25
PTPN23-201ENST00000265562 MYO6Q9UM54 1294 aa16.61■□□□□ 0.25
PTPN23-201ENST00000265562 PIP4K2AP48426 406 aaPredicted RBP16.61■□□□□ 0.25
PTPN23-201ENST00000265562 SLFN5Q08AF3 891 aa16.61■□□□□ 0.25
PTPN23-201ENST00000265562 SKIDA1Q1XH10 827 aa16.61■□□□□ 0.25
PTPN23-201ENST00000265562 JMYQ8N9B5 988 aa16.61■□□□□ 0.25
PTPN23-201ENST00000265562 ARAP1Q96P48 1450 aa16.6■□□□□ 0.25
PTPN23-201ENST00000265562 BRPF1P55201 1214 aaPredicted RBP16.6■□□□□ 0.25
PTPN23-201ENST00000265562 PRDM10Q9NQV6 1147 aa16.6■□□□□ 0.25
PTPN23-201ENST00000265562 CBX1P83916 185 aa16.6■□□□□ 0.25
PTPN23-201ENST00000265562 ME1P48163 572 aa16.6■□□□□ 0.25
PTPN23-201ENST00000265562 ERC1Q8IUD2 1116 aa16.59■□□□□ 0.25
PTPN23-201ENST00000265562 SPATA32Q96LK8 384 aa16.59■□□□□ 0.25
PTPN23-201ENST00000265562 CBFA2T2O43439 604 aa16.59■□□□□ 0.25
PTPN23-201ENST00000265562 PPFIBP1Q86W92 1011 aa16.59■□□□□ 0.25
PTPN23-201ENST00000265562 AIMP1Q12904 312 aaKnown RBP16.59■□□□□ 0.25
PTPN23-201ENST00000265562 XPCQ01831 940 aaPredicted RBP16.59■□□□□ 0.25
PTPN23-201ENST00000265562 CEP57L1Q8IYX8 460 aa16.59■□□□□ 0.25
PTPN23-201ENST00000265562 EPS15P42566 896 aa16.58■□□□□ 0.25
PTPN23-201ENST00000265562 CT47A1Q5JQC4 288 aaPredicted RBP16.58■□□□□ 0.25
PTPN23-201ENST00000265562 FILIP1Q7Z7B0 1213 aa16.58■□□□□ 0.25
PTPN23-201ENST00000265562 FAM177A1Q8N128 213 aaPredicted RBP16.58■□□□□ 0.24
PTPN23-201ENST00000265562 CCT4P50991 539 aaKnown RBP16.58■□□□□ 0.24
PTPN23-201ENST00000265562 ZSCAN31Q96LW9 406 aaPredicted RBP16.58■□□□□ 0.24
PTPN23-201ENST00000265562 MAGEC2Q9UBF1 373 aaPredicted RBP16.58■□□□□ 0.24
PTPN23-201ENST00000265562 ATP2B1P20020 1258 aa16.57■□□□□ 0.24
PTPN23-201ENST00000265562 USP8P40818 1118 aa16.57■□□□□ 0.24
PTPN23-201ENST00000265562 STK3Q13188 491 aa16.57■□□□□ 0.24
PTPN23-201ENST00000265562 HSP90AB3PQ58FF7 597 aa16.57■□□□□ 0.24
PTPN23-201ENST00000265562 VPS37DQ86XT2 251 aa16.57■□□□□ 0.24
PTPN23-201ENST00000265562 UBXN4Q92575 508 aa16.57■□□□□ 0.24
PTPN23-201ENST00000265562 DNAJC2Q99543 621 aaKnown RBP16.57■□□□□ 0.24
PTPN23-201ENST00000265562 SRCIN1Q9C0H9 1055 aa16.57■□□□□ 0.24
PTPN23-201ENST00000265562 DACH1Q9UI36 760 aa16.57■□□□□ 0.24
PTPN23-201ENST00000265562 KDM4AO75164 1064 aa16.57■□□□□ 0.24
PTPN23-201ENST00000265562 SKAP1Q86WV1 359 aa16.57■□□□□ 0.24
PTPN23-201ENST00000265562 TBC1D2Q9BYX2 928 aa16.57■□□□□ 0.24
PTPN23-201ENST00000265562 HFM1A2PYH4 1435 aa16.57■□□□□ 0.24
PTPN23-201ENST00000265562 CFAP70Q5T0N1 1121 aa16.57■□□□□ 0.24
PTPN23-201ENST00000265562 OSCARQ8IYS5 282 aa16.57■□□□□ 0.24
PTPN23-201ENST00000265562 KIAA1107Q9UPP5 1409 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms