RNA–Protein interactions for RNA: ENST00000265304.10

SSBP1-201, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-201ENST00000265304 HDGFL2Q7Z4V5 671 aaPredicted RBP19.75■□□□□ 0.75
SSBP1-201ENST00000265304 CARD14Q9BXL6 1004 aa19.75■□□□□ 0.75
SSBP1-201ENST00000265304 SPATA31A3Q5VYP0 1347 aa19.75■□□□□ 0.75
SSBP1-201ENST00000265304 DDX17Q92841 729 aaKnown RBP19.74■□□□□ 0.75
SSBP1-201ENST00000265304 LRRC59Q96AG4 307 aaKnown RBP19.74■□□□□ 0.75
SSBP1-201ENST00000265304 TTC21AQ8NDW8 1320 aa19.74■□□□□ 0.75
SSBP1-201ENST00000265304 PANK3Q9H999 370 aa19.72■□□□□ 0.75
SSBP1-201ENST00000265304 COL22A1Q8NFW1 1626 aaPredicted RBP19.72■□□□□ 0.75
SSBP1-201ENST00000265304 TTC21BQ7Z4L5 1316 aa19.72■□□□□ 0.75
SSBP1-201ENST00000265304 SHPRHQ149N8 1683 aa19.71■□□□□ 0.75
SSBP1-201ENST00000265304 TNS3Q68CZ2 1445 aa19.71■□□□□ 0.75
SSBP1-201ENST00000265304 MARF1Q9Y4F3 1742 aaKnown RBP19.71■□□□□ 0.75
SSBP1-201ENST00000265304 USP31Q70CQ4 1352 aa19.7■□□□□ 0.74
SSBP1-201ENST00000265304 HSPA1LP34931 641 aa19.7■□□□□ 0.74
SSBP1-201ENST00000265304 PIK3C2AO00443 1686 aa19.7■□□□□ 0.74
SSBP1-201ENST00000265304 SCAF1Q9H7N4 1312 aaKnown RBP19.7■□□□□ 0.74
SSBP1-201ENST00000265304 CRYBG1Q9Y4K1 1723 aa19.69■□□□□ 0.74
SSBP1-201ENST00000265304 MED1Q15648 1581 aaPredicted RBP19.69■□□□□ 0.74
SSBP1-201ENST00000265304 ARHGEF10O15013 1369 aa19.69■□□□□ 0.74
SSBP1-201ENST00000265304 NPC1L1Q9UHC9 1359 aa19.69■□□□□ 0.74
SSBP1-201ENST00000265304 XPCQ01831 940 aaPredicted RBP19.67■□□□□ 0.74
SSBP1-201ENST00000265304 POLR3GLQ9BT43 218 aa19.67■□□□□ 0.74
SSBP1-201ENST00000265304 KIF20BQ96Q89 1820 aa19.67■□□□□ 0.74
SSBP1-201ENST00000265304 PNPLA6Q8IY17 1366 aa19.66■□□□□ 0.74
SSBP1-201ENST00000265304 JCADQ9P266 1359 aa19.66■□□□□ 0.74
SSBP1-201ENST00000265304 FYB1O15117 783 aa19.65■□□□□ 0.74
SSBP1-201ENST00000265304 NSD3Q9BZ95 1437 aa19.65■□□□□ 0.74
SSBP1-201ENST00000265304 ANKRD26Q9UPS8 1709 aa19.65■□□□□ 0.74
SSBP1-201ENST00000265304 AMER1Q5JTC6 1135 aaPredicted RBP19.64■□□□□ 0.73
SSBP1-201ENST00000265304 USP19O94966 1318 aa19.64■□□□□ 0.73
SSBP1-201ENST00000265304 OVOS2A0A0J9YW53 1432 aa19.63■□□□□ 0.73
SSBP1-201ENST00000265304 OVOS2Q6IE36 1432 aa19.63■□□□□ 0.73
SSBP1-201ENST00000265304 NSD2O96028 1365 aa19.63■□□□□ 0.73
SSBP1-201ENST00000265304 CGNL1Q0VF96 1302 aa19.63■□□□□ 0.73
SSBP1-201ENST00000265304 ABCA3Q99758 1704 aa19.62■□□□□ 0.73
SSBP1-201ENST00000265304 SLIT3O75094 1523 aa19.62■□□□□ 0.73
SSBP1-201ENST00000265304 ABTB2Q8N961 1025 aa19.62■□□□□ 0.73
SSBP1-201ENST00000265304 NLRP13Q86W25 1043 aa19.61■□□□□ 0.73
SSBP1-201ENST00000265304 KNSTRNQ9Y448 316 aa19.61■□□□□ 0.73
SSBP1-201ENST00000265304 PAK3O75914 559 aaPredicted RBP19.6■□□□□ 0.73
SSBP1-201ENST00000265304 DDX10Q13206 875 aaKnown RBP19.6■□□□□ 0.73
SSBP1-201ENST00000265304 NME9Q86XW9 330 aa19.6■□□□□ 0.73
SSBP1-201ENST00000265304 PHRF1Q9P1Y6 1649 aaKnown RBP19.59■□□□□ 0.73
SSBP1-201ENST00000265304 SPATA31A6Q5VVP1 1343 aa19.59■□□□□ 0.73
SSBP1-201ENST00000265304 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.59■□□□□ 0.73
SSBP1-201ENST00000265304 NLRP6P59044 892 aa19.58■□□□□ 0.72
SSBP1-201ENST00000265304 ILDR1Q86SU0 546 aaPredicted RBP19.56■□□□□ 0.72
SSBP1-201ENST00000265304 NFAT5O94916 1531 aa19.56■□□□□ 0.72
SSBP1-201ENST00000265304 ZRANB1Q9UGI0 708 aa19.55■□□□□ 0.72
SSBP1-201ENST00000265304 MAP2P11137 1827 aaKnown RBP19.54■□□□□ 0.72
SSBP1-201ENST00000265304 GCP02774 474 aa19.54■□□□□ 0.72
SSBP1-201ENST00000265304 KCNH5Q8NCM2 988 aa19.54■□□□□ 0.72
SSBP1-201ENST00000265304 CPDO75976 1380 aa19.54■□□□□ 0.72
SSBP1-201ENST00000265304 COG3Q96JB2 828 aa19.53■□□□□ 0.72
SSBP1-201ENST00000265304 GGNBP2Q9H3C7 697 aa19.53■□□□□ 0.72
SSBP1-201ENST00000265304 AATKQ6ZMQ8 1374 aa19.53■□□□□ 0.72
SSBP1-201ENST00000265304 LMOD2Q6P5Q4 547 aa19.51■□□□□ 0.71
SSBP1-201ENST00000265304 COL18A1P39060 1754 aa19.51■□□□□ 0.71
SSBP1-201ENST00000265304 NUTM2GQ5VZR2 741 aa19.5■□□□□ 0.71
SSBP1-201ENST00000265304 CABLES1Q8TDN4 633 aa19.5■□□□□ 0.71
SSBP1-201ENST00000265304 ABCC6O95255 1503 aa19.5■□□□□ 0.71
SSBP1-201ENST00000265304 ARHGEF25Q86VW2 580 aa19.49■□□□□ 0.71
SSBP1-201ENST00000265304 LRP6O75581 1613 aa19.49■□□□□ 0.71
SSBP1-201ENST00000265304 KIF24Q5T7B8 1368 aa19.48■□□□□ 0.71
SSBP1-201ENST00000265304 PARD3Q8TEW0 1356 aa19.48■□□□□ 0.71
SSBP1-201ENST00000265304 LTN1O94822 1766 aa19.48■□□□□ 0.71
SSBP1-201ENST00000265304 LMO7Q8WWI1 1683 aa19.46■□□□□ 0.71
SSBP1-201ENST00000265304 COL14A1Q05707 1796 aaKnown RBP19.46■□□□□ 0.71
SSBP1-201ENST00000265304 SMG6Q86US8 1419 aaKnown RBP19.45■□□□□ 0.7
SSBP1-201ENST00000265304 MORC1Q86VD1 984 aa19.45■□□□□ 0.7
SSBP1-201ENST00000265304 NWD2Q9ULI1 1742 aa19.45■□□□□ 0.7
SSBP1-201ENST00000265304 RALBP1Q15311 655 aa19.43■□□□□ 0.7
SSBP1-201ENST00000265304 INSRP06213 1382 aa19.43■□□□□ 0.7
SSBP1-201ENST00000265304 KIAA0232Q92628 1395 aa19.43■□□□□ 0.7
SSBP1-201ENST00000265304 SLIT2O94813 1529 aa19.42■□□□□ 0.7
SSBP1-201ENST00000265304 FAM83GA6ND36 823 aa19.42■□□□□ 0.7
SSBP1-201ENST00000265304 CC2D1BQ5T0F9 858 aaKnown RBP19.42■□□□□ 0.7
SSBP1-201ENST00000265304 FNBP4Q8N3X1 1017 aaPredicted RBP19.42■□□□□ 0.7
SSBP1-201ENST00000265304 POLKQ9UBT6 870 aa19.42■□□□□ 0.7
SSBP1-201ENST00000265304 RGPD5Q99666 1765 aa19.42■□□□□ 0.7
SSBP1-201ENST00000265304 PRKRIP1Q9H875 184 aaPredicted RBP19.41■□□□□ 0.7
SSBP1-201ENST00000265304 PEAK1Q9H792 1746 aa19.41■□□□□ 0.7
SSBP1-201ENST00000265304 MAP3K19Q56UN5 1328 aa19.41■□□□□ 0.7
SSBP1-201ENST00000265304 RTL1A6NKG5 1358 aa19.41■□□□□ 0.7
SSBP1-201ENST00000265304 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.4■□□□□ 0.7
SSBP1-201ENST00000265304 ZC3H6P61129 1189 aaKnown RBP19.4■□□□□ 0.7
SSBP1-201ENST00000265304 PLCH1Q4KWH8 1693 aa19.4■□□□□ 0.7
SSBP1-201ENST00000265304 CAMTA1Q9Y6Y1 1673 aa19.4■□□□□ 0.7
SSBP1-201ENST00000265304 FBLN1P23142 703 aa19.39■□□□□ 0.69
SSBP1-201ENST00000265304 IP6K1Q92551 441 aa19.39■□□□□ 0.69
SSBP1-201ENST00000265304 NUTM2BA6NNL0 878 aaPredicted RBP19.38■□□□□ 0.69
SSBP1-201ENST00000265304 NUTM2EB1AL46 878 aaPredicted RBP19.38■□□□□ 0.69
SSBP1-201ENST00000265304 BLMP54132 1417 aaPredicted RBP19.38■□□□□ 0.69
SSBP1-201ENST00000265304 NRAPQ86VF7 1730 aa19.38■□□□□ 0.69
SSBP1-201ENST00000265304 NUTM2AQ8IVF1 878 aaPredicted RBP19.38■□□□□ 0.69
SSBP1-201ENST00000265304 HAP1P54257 671 aaPredicted RBP19.37■□□□□ 0.69
SSBP1-201ENST00000265304 PRDM11Q9NQV5 511 aa19.37■□□□□ 0.69
SSBP1-201ENST00000265304 BCL9LQ86UU0 1499 aa19.36■□□□□ 0.69
SSBP1-201ENST00000265304 CDK12Q9NYV4 1490 aaPredicted RBP19.36■□□□□ 0.69
SSBP1-201ENST00000265304 FLT4P35916 1363 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms