RNA–Protein interactions for RNA: ENST00000265260.7

PCNP-201, Transcript of PEST proteolytic signal containing nuclear protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCNP, Length 2,342 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNP-201ENST00000265260 TRIM27P14373 513 aa20.54■□□□□ 0.88
PCNP-201ENST00000265260 ZKSCAN5Q9Y2L8 839 aa20.54■□□□□ 0.88
PCNP-201ENST00000265260 ADGRL1O94910 1474 aa20.54■□□□□ 0.88
PCNP-201ENST00000265260 TRHP20396 242 aaPredicted RBP20.53■□□□□ 0.88
PCNP-201ENST00000265260 CFAP74Q9C0B2 1584 aa20.53■□□□□ 0.88
PCNP-201ENST00000265260 ZBTB40Q9NUA8 1239 aa20.53■□□□□ 0.88
PCNP-201ENST00000265260 ZNF518AQ6AHZ1 1483 aa20.52■□□□□ 0.88
PCNP-201ENST00000265260 GAS2L2Q8NHY3 880 aa20.52■□□□□ 0.88
PCNP-201ENST00000265260 ADGRB2O60241 1585 aa20.52■□□□□ 0.88
PCNP-201ENST00000265260 PTPRTO14522 1441 aa20.51■□□□□ 0.87
PCNP-201ENST00000265260 ZSCAN23Q3MJ62 389 aa20.51■□□□□ 0.87
PCNP-201ENST00000265260 UTP14CQ5TAP6 766 aaKnown RBP20.51■□□□□ 0.87
PCNP-201ENST00000265260 ATF7IPQ6VMQ6 1270 aa20.51■□□□□ 0.87
PCNP-201ENST00000265260 XPCQ01831 940 aaPredicted RBP20.5■□□□□ 0.87
PCNP-201ENST00000265260 SASS6Q6UVJ0 657 aa20.5■□□□□ 0.87
PCNP-201ENST00000265260 RBSNQ9H1K0 784 aa20.5■□□□□ 0.87
PCNP-201ENST00000265260 CHD1LQ86WJ1 897 aa20.5■□□□□ 0.87
PCNP-201ENST00000265260 SBNO2Q9Y2G9 1366 aa20.5■□□□□ 0.87
PCNP-201ENST00000265260 NEURL4Q96JN8 1562 aa20.5■□□□□ 0.87
PCNP-201ENST00000265260 MORC1Q86VD1 984 aa20.49■□□□□ 0.87
PCNP-201ENST00000265260 ITPRIPQ8IWB1 547 aa20.49■□□□□ 0.87
PCNP-201ENST00000265260 SMC4Q9NTJ3 1288 aa20.49■□□□□ 0.87
PCNP-201ENST00000265260 LMBRD1Q9NUN5 540 aa20.49■□□□□ 0.87
PCNP-201ENST00000265260 MYO3AQ8NEV4 1616 aa20.49■□□□□ 0.87
PCNP-201ENST00000265260 CYP2E1P05181 493 aaPredicted RBP20.48■□□□□ 0.87
PCNP-201ENST00000265260 FOXD4L1Q9NU39 408 aa20.48■□□□□ 0.87
PCNP-201ENST00000265260 NUCB2P80303 420 aa20.48■□□□□ 0.87
PCNP-201ENST00000265260 CLTCL1P53675 1640 aa20.47■□□□□ 0.87
PCNP-201ENST00000265260 NOS1P29475 1434 aa20.47■□□□□ 0.87
PCNP-201ENST00000265260 USP32Q8NFA0 1604 aa20.47■□□□□ 0.87
PCNP-201ENST00000265260 PLEKHG5O94827 1062 aa20.46■□□□□ 0.87
PCNP-201ENST00000265260 SSH1Q8WYL5 1049 aa20.46■□□□□ 0.87
PCNP-201ENST00000265260 REREQ9P2R6 1566 aa20.46■□□□□ 0.87
PCNP-201ENST00000265260 NSD3Q9BZ95 1437 aa20.46■□□□□ 0.87
PCNP-201ENST00000265260 CAVIN1Q6NZI2 390 aaKnown RBP20.45■□□□□ 0.87
PCNP-201ENST00000265260 LNPKQ9C0E8 428 aa20.45■□□□□ 0.87
PCNP-201ENST00000265260 CCDC39Q9UFE4 941 aa20.45■□□□□ 0.87
PCNP-201ENST00000265260 CCDC94Q9BW85 323 aaPredicted RBP20.45■□□□□ 0.86
PCNP-201ENST00000265260 ARHGAP5Q13017 1502 aa20.45■□□□□ 0.86
PCNP-201ENST00000265260 DMTNQ08495 405 aa20.44■□□□□ 0.86
PCNP-201ENST00000265260 TMEM57Q8N5G2 664 aa20.44■□□□□ 0.86
PCNP-201ENST00000265260 PRIM1P49642 420 aaKnown RBP20.44■□□□□ 0.86
PCNP-201ENST00000265260 TBC1D9Q6ZT07 1266 aa20.44■□□□□ 0.86
PCNP-201ENST00000265260 CFAP53Q96M91 514 aa20.44■□□□□ 0.86
PCNP-201ENST00000265260 RBM42Q9BTD8 480 aaKnown RBP20.44■□□□□ 0.86
PCNP-201ENST00000265260 EXOSC9Q06265 439 aaKnown RBP20.43■□□□□ 0.86
PCNP-201ENST00000265260 MCTP1Q6DN14 999 aa20.43■□□□□ 0.86
PCNP-201ENST00000265260 NOB1Q9ULX3 412 aaKnown RBP20.43■□□□□ 0.86
PCNP-201ENST00000265260 MYOM2P54296 1465 aa20.42■□□□□ 0.86
PCNP-201ENST00000265260 ABCC11Q96J66 1382 aa20.42■□□□□ 0.86
PCNP-201ENST00000265260 MAP3K4Q9Y6R4 1608 aa20.42■□□□□ 0.86
PCNP-201ENST00000265260 MTHFSP49914 203 aa20.41■□□□□ 0.86
PCNP-201ENST00000265260 ABCA6Q8N139 1617 aa20.41■□□□□ 0.86
PCNP-201ENST00000265260 IL16Q14005 1332 aa20.41■□□□□ 0.86
PCNP-201ENST00000265260 TSR2Q969E8 191 aaKnown RBP20.41■□□□□ 0.86
PCNP-201ENST00000265260 GCC1Q96CN9 775 aa20.41■□□□□ 0.86
PCNP-201ENST00000265260 IPO8O15397 1037 aaKnown RBP20.4■□□□□ 0.86
PCNP-201ENST00000265260 NPM1P06748 294 aaKnown RBP eCLIP20.4■□□□□ 0.86
PCNP-201ENST00000265260 RABEP1Q15276 862 aa20.4■□□□□ 0.86
PCNP-201ENST00000265260 LRSAM1Q6UWE0 723 aa20.4■□□□□ 0.86
PCNP-201ENST00000265260 CWC22Q9HCG8 908 aaKnown RBP20.39■□□□□ 0.86
PCNP-201ENST00000265260 ZSCAN20P17040 1043 aaPredicted RBP20.38■□□□□ 0.85
PCNP-201ENST00000265260 NCLP19338 710 aaKnown RBP20.38■□□□□ 0.85
PCNP-201ENST00000265260 MED14O60244 1454 aa20.38■□□□□ 0.85
PCNP-201ENST00000265260 MYRIPQ8NFW9 859 aa20.38■□□□□ 0.85
PCNP-201ENST00000265260 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.38■□□□□ 0.853e-6■□□□□ 8.5
PCNP-201ENST00000265260 CFAP70Q5T0N1 1121 aa20.37■□□□□ 0.85
PCNP-201ENST00000265260 GPT2Q8TD30 523 aa20.37■□□□□ 0.85
PCNP-201ENST00000265260 AK9Q5TCS8 1911 aa20.37■□□□□ 0.85
PCNP-201ENST00000265260 CDC45O75419 566 aa20.36■□□□□ 0.85
PCNP-201ENST00000265260 TNNT2P45379 298 aaPredicted RBP20.36■□□□□ 0.85
PCNP-201ENST00000265260 CFAP44Q96MT7 982 aa20.36■□□□□ 0.85
PCNP-201ENST00000265260 PPRC1Q5VV67 1664 aaKnown RBP20.35■□□□□ 0.85
PCNP-201ENST00000265260 ALDH1L2Q3SY69 923 aa20.35■□□□□ 0.85
PCNP-201ENST00000265260 PPIP5K1Q6PFW1 1433 aa20.35■□□□□ 0.85
PCNP-201ENST00000265260 CD109Q6YHK3 1445 aa20.35■□□□□ 0.85
PCNP-201ENST00000265260 ANKRD45Q5TZF3 282 aa20.35■□□□□ 0.85
PCNP-201ENST00000265260 INO80Q9ULG1 1556 aaPredicted RBP20.34■□□□□ 0.85
PCNP-201ENST00000265260 U2AF1L5P0DN76 240 aaPredicted RBP20.34■□□□□ 0.85
PCNP-201ENST00000265260 BRPF1P55201 1214 aaPredicted RBP20.34■□□□□ 0.85
PCNP-201ENST00000265260 U2AF1Q01081 240 aaKnown RBP eCLIP20.34■□□□□ 0.85
PCNP-201ENST00000265260 TRIM35Q9UPQ4 493 aa20.34■□□□□ 0.85
PCNP-201ENST00000265260 GTF2F1P35269 517 aaKnown RBP eCLIP20.33■□□□□ 0.852e-8■■■□□ 17.9
PCNP-201ENST00000265260 PRIMPOLQ96LW4 560 aa20.33■□□□□ 0.85
PCNP-201ENST00000265260 PLEKHF1Q96S99 279 aa20.33■□□□□ 0.85
PCNP-201ENST00000265260 GTPBP4Q9BZE4 634 aaKnown RBP20.33■□□□□ 0.85
PCNP-201ENST00000265260 TET3O43151 1660 aa20.33■□□□□ 0.85
PCNP-201ENST00000265260 CHMP4BQ9H444 224 aaKnown RBP20.33■□□□□ 0.84
PCNP-201ENST00000265260 PRDM10Q9NQV6 1147 aa20.33■□□□□ 0.84
PCNP-201ENST00000265260 NSD2O96028 1365 aa20.32■□□□□ 0.84
PCNP-201ENST00000265260 PRPF40AO75400 957 aaKnown RBP20.32■□□□□ 0.84
PCNP-201ENST00000265260 TMPOP42166 694 aaKnown RBP20.32■□□□□ 0.84
PCNP-201ENST00000265260 KIAA2012Q0VF49 1180 aa20.32■□□□□ 0.84
PCNP-201ENST00000265260 TMEM63CQ9P1W3 806 aa20.32■□□□□ 0.84
PCNP-201ENST00000265260 RBM27Q9P2N5 1060 aaKnown RBP20.32■□□□□ 0.84
PCNP-201ENST00000265260 ZHX1Q9UKY1 873 aaPredicted RBP20.32■□□□□ 0.84
PCNP-201ENST00000265260 NRXN1Q9ULB1 1477 aa20.32■□□□□ 0.84
PCNP-201ENST00000265260 TRAPPC8Q9Y2L5 1435 aa20.32■□□□□ 0.84
PCNP-201ENST00000265260 ZC3H13Q5T200 1668 aaKnown RBP20.32■□□□□ 0.84
PCNP-201ENST00000265260 DEPDC5O75140 1603 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms