RNA–Protein interactions for RNA: ENST00000264025.7

NECTIN1-201, Transcript of nectin cell adhesion molecule 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NECTIN1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-201ENST00000264025 RABEP1Q15276 862 aa23.14■■□□□ 1.29
NECTIN1-201ENST00000264025 NCOA2Q15596 1464 aa23.13■■□□□ 1.29
NECTIN1-201ENST00000264025 IKQ13123 557 aaPredicted RBP23.13■■□□□ 1.29
NECTIN1-201ENST00000264025 PDZRN3Q9UPQ7 1066 aa23.13■■□□□ 1.29
NECTIN1-201ENST00000264025 GNAI2P04899 355 aa23.13■■□□□ 1.29
NECTIN1-201ENST00000264025 SCAPERQ9BY12 1400 aa23.13■■□□□ 1.29
NECTIN1-201ENST00000264025 CDCA7LQ96GN5 454 aa23.13■■□□□ 1.29
NECTIN1-201ENST00000264025 SLC3A2P08195 630 aaKnown RBP23.12■■□□□ 1.29
NECTIN1-201ENST00000264025 TRIM5Q9C035 493 aa23.12■■□□□ 1.29
NECTIN1-201ENST00000264025 SMG6Q86US8 1419 aaKnown RBP23.12■■□□□ 1.29
NECTIN1-201ENST00000264025 ARHGAP5Q13017 1502 aa23.12■■□□□ 1.29
NECTIN1-201ENST00000264025 TRAK2O60296 914 aa23.11■■□□□ 1.29
NECTIN1-201ENST00000264025 KLHL34Q8N239 644 aa23.11■■□□□ 1.29
NECTIN1-201ENST00000264025 CAGE1Q8TC20 777 aa23.11■■□□□ 1.29
NECTIN1-201ENST00000264025 KDM4AO75164 1064 aa23.11■■□□□ 1.29
NECTIN1-201ENST00000264025 CAVIN1Q6NZI2 390 aaKnown RBP23.11■■□□□ 1.29
NECTIN1-201ENST00000264025 PDE3AQ14432 1141 aa23.11■■□□□ 1.29
NECTIN1-201ENST00000264025 RRP12Q5JTH9 1297 aaKnown RBP23.1■■□□□ 1.29
NECTIN1-201ENST00000264025 ZNF396Q96N95 335 aaPredicted RBP23.1■■□□□ 1.29
NECTIN1-201ENST00000264025 FBXO3Q9UK99 471 aa23.1■■□□□ 1.29
NECTIN1-201ENST00000264025 ZFYVE27Q5T4F4 411 aa23.09■■□□□ 1.29
NECTIN1-201ENST00000264025 CASKIN1Q8WXD9 1431 aa23.09■■□□□ 1.29
NECTIN1-201ENST00000264025 ATP2B1P20020 1258 aa23.09■■□□□ 1.29
NECTIN1-201ENST00000264025 TXLNAP40222 546 aa23.09■■□□□ 1.29
NECTIN1-201ENST00000264025 ESCO1Q5FWF5 840 aa23.09■■□□□ 1.29
NECTIN1-201ENST00000264025 FAM177BA6PVY3 158 aa23.09■■□□□ 1.29
NECTIN1-201ENST00000264025 FILIP1LQ4L180 1135 aa23.08■■□□□ 1.29
NECTIN1-201ENST00000264025 HSP90AB2PQ58FF8 381 aa23.08■■□□□ 1.29
NECTIN1-201ENST00000264025 TSPY26PQ9H489 355 aa23.08■■□□□ 1.29
NECTIN1-201ENST00000264025 UTP3Q9NQZ2 479 aaKnown RBP eCLIP23.08■■□□□ 1.29
NECTIN1-201ENST00000264025 SMC2O95347 1197 aa23.08■■□□□ 1.29
NECTIN1-201ENST00000264025 KIF21BO75037 1637 aa23.08■■□□□ 1.28
NECTIN1-201ENST00000264025 CCDC158Q5M9N0 1113 aa23.07■■□□□ 1.28
NECTIN1-201ENST00000264025 CDK5RAP3Q96JB5 506 aa23.07■■□□□ 1.28
NECTIN1-201ENST00000264025 RBM42Q9BTD8 480 aaKnown RBP23.07■■□□□ 1.28
NECTIN1-201ENST00000264025 C1orf115Q9H7X2 142 aa23.07■■□□□ 1.28
NECTIN1-201ENST00000264025 ERCC4Q92889 916 aaPredicted RBP23.07■■□□□ 1.28
NECTIN1-201ENST00000264025 TTC39AQ5SRH9 613 aa23.07■■□□□ 1.28
NECTIN1-201ENST00000264025 SMARCE1Q969G3 411 aa23.07■■□□□ 1.28
NECTIN1-201ENST00000264025 NOB1Q9ULX3 412 aaKnown RBP23.07■■□□□ 1.28
NECTIN1-201ENST00000264025 PRAM1Q96QH2 718 aa23.06■■□□□ 1.28
NECTIN1-201ENST00000264025 PRPF40AO75400 957 aaKnown RBP23.06■■□□□ 1.28
NECTIN1-201ENST00000264025 STK38Q15208 465 aa23.06■■□□□ 1.28
NECTIN1-201ENST00000264025 AFAP1Q8N556 730 aa23.06■■□□□ 1.28
NECTIN1-201ENST00000264025 MAGEC2Q9UBF1 373 aaPredicted RBP23.06■■□□□ 1.28
NECTIN1-201ENST00000264025 HDGFL1Q5TGJ6 251 aa23.06■■□□□ 1.28
NECTIN1-201ENST00000264025 TXNDC2Q86VQ3 553 aa23.06■■□□□ 1.28
NECTIN1-201ENST00000264025 CNNM1Q9NRU3 951 aa23.06■■□□□ 1.28
NECTIN1-201ENST00000264025 TATP17735 454 aaPredicted RBP23.05■■□□□ 1.28
NECTIN1-201ENST00000264025 CCP110O43303 1012 aa23.05■■□□□ 1.28
NECTIN1-201ENST00000264025 RDXP35241 583 aaKnown RBP23.05■■□□□ 1.28
NECTIN1-201ENST00000264025 CCT4P50991 539 aaKnown RBP23.05■■□□□ 1.28
NECTIN1-201ENST00000264025 SLC4A2P04920 1241 aa23.05■■□□□ 1.28
NECTIN1-201ENST00000264025 PIP4K2AP48426 406 aaPredicted RBP23.05■■□□□ 1.28
NECTIN1-201ENST00000264025 TTLL5Q6EMB2 1281 aa23.05■■□□□ 1.28
NECTIN1-201ENST00000264025 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.05■■□□□ 1.28
NECTIN1-201ENST00000264025 NOM1Q5C9Z4 860 aaKnown RBP23.04■■□□□ 1.28
NECTIN1-201ENST00000264025 GNL3LQ9NVN8 582 aaKnown RBP23.04■■□□□ 1.28
NECTIN1-201ENST00000264025 MYO6Q9UM54 1294 aa23.04■■□□□ 1.28
NECTIN1-201ENST00000264025 FIBPO43427 364 aa23.04■■□□□ 1.28
NECTIN1-201ENST00000264025 HFM1A2PYH4 1435 aa23.04■■□□□ 1.28
NECTIN1-201ENST00000264025 JMYQ8N9B5 988 aa23.03■■□□□ 1.28
NECTIN1-201ENST00000264025 PNISRQ8TF01 805 aaKnown RBP23.03■■□□□ 1.28
NECTIN1-201ENST00000264025 FMNL2Q96PY5 1086 aa23.03■■□□□ 1.28
NECTIN1-201ENST00000264025 CYP46A1Q9Y6A2 500 aa23.03■■□□□ 1.28
NECTIN1-201ENST00000264025 KRI1Q8N9T8 703 aaKnown RBP23.02■■□□□ 1.28
NECTIN1-201ENST00000264025 TSR2Q969E8 191 aaKnown RBP23.02■■□□□ 1.28
NECTIN1-201ENST00000264025 CCAR1Q8IX12 1150 aaKnown RBP23.02■■□□□ 1.28
NECTIN1-201ENST00000264025 MTERF4Q7Z6M4 381 aaKnown RBP23.02■■□□□ 1.27
NECTIN1-201ENST00000264025 BCL11BQ9C0K0 894 aaPredicted RBP23.02■■□□□ 1.27
NECTIN1-201ENST00000264025 ANKRD1Q15327 319 aa23.01■■□□□ 1.27
NECTIN1-201ENST00000264025 LRRCC1Q9C099 1032 aa23.01■■□□□ 1.27
NECTIN1-201ENST00000264025 CT47B1P0C2W7 299 aaPredicted RBP23.01■■□□□ 1.27
NECTIN1-201ENST00000264025 SULT6B1Q6IMI4 303 aa23.01■■□□□ 1.27
NECTIN1-201ENST00000264025 PROSER2Q86WR7 435 aaPredicted RBP23.01■■□□□ 1.27
NECTIN1-201ENST00000264025 AEBP1Q8IUX7 1158 aa23■■□□□ 1.27
NECTIN1-201ENST00000264025 ZNF692Q9BU19 519 aaPredicted RBP23■■□□□ 1.27
NECTIN1-201ENST00000264025 AQRO60306 1485 aaKnown RBP eCLIP23■■□□□ 1.27
NECTIN1-201ENST00000264025 KRT18P05783 430 aaKnown RBP23■■□□□ 1.27
NECTIN1-201ENST00000264025 DCTN1Q14203 1278 aa23■■□□□ 1.27
NECTIN1-201ENST00000264025 SRCIN1Q9C0H9 1055 aa23■■□□□ 1.27
NECTIN1-201ENST00000264025 NACAP1Q9BZK3 213 aa22.99■■□□□ 1.27
NECTIN1-201ENST00000264025 SYNJ2O15056 1496 aa22.99■■□□□ 1.27
NECTIN1-201ENST00000264025 CEBPZQ03701 1054 aaKnown RBP22.99■■□□□ 1.27
NECTIN1-201ENST00000264025 NBPF1Q3BBV0 1214 aa22.98■■□□□ 1.27
NECTIN1-201ENST00000264025 STRN4Q9NRL3 753 aa22.98■■□□□ 1.27
NECTIN1-201ENST00000264025 BRPF1P55201 1214 aaPredicted RBP22.98■■□□□ 1.27
NECTIN1-201ENST00000264025 TRIM22Q8IYM9 498 aa22.98■■□□□ 1.27
NECTIN1-201ENST00000264025 MAP7D2Q96T17 732 aa22.98■■□□□ 1.27
NECTIN1-201ENST00000264025 SLC12A5Q9H2X9 1139 aa22.98■■□□□ 1.27
NECTIN1-201ENST00000264025 BCAR3O75815 825 aa22.97■■□□□ 1.27
NECTIN1-201ENST00000264025 TMEM132AQ24JP5 1023 aa22.97■■□□□ 1.27
NECTIN1-201ENST00000264025 WDR63Q8IWG1 891 aa22.97■■□□□ 1.27
NECTIN1-201ENST00000264025 CABP4P57796 275 aa22.97■■□□□ 1.27
NECTIN1-201ENST00000264025 CDK19Q9BWU1 502 aa22.97■■□□□ 1.27
NECTIN1-201ENST00000264025 SYCP1Q15431 976 aa22.96■■□□□ 1.27
NECTIN1-201ENST00000264025 DHX8Q14562 1220 aaKnown RBP22.95■■□□□ 1.27
NECTIN1-201ENST00000264025 ZNF530Q6P9A1 599 aaPredicted RBP22.95■■□□□ 1.27
NECTIN1-201ENST00000264025 WDR33Q9C0J8 1336 aaKnown RBP22.95■■□□□ 1.27
NECTIN1-201ENST00000264025 SIL1Q9H173 461 aa22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms