RNA–Protein interactions for RNA: ENST00000263966.7

USP13-201, Transcript of ubiquitin specific peptidase 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP13, Length 8,323 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP13-201ENST00000263966 TTLL12Q14166 644 aaPredicted RBP19.63■□□□□ 0.73
USP13-201ENST00000263966 CCDC150Q8NCX0 1101 aa19.63■□□□□ 0.73
USP13-201ENST00000263966 ABCC8Q09428 1581 aa19.62■□□□□ 0.73
USP13-201ENST00000263966 NUCB2P80303 420 aa19.62■□□□□ 0.73
USP13-201ENST00000263966 PLEKHO1Q53GL0 409 aaPredicted RBP19.62■□□□□ 0.73
USP13-201ENST00000263966 SCLT1Q96NL6 688 aa19.62■□□□□ 0.73
USP13-201ENST00000263966 FAM177BA6PVY3 158 aa19.62■□□□□ 0.73
USP13-201ENST00000263966 ZSCAN25Q6NSZ9 544 aa19.62■□□□□ 0.73
USP13-201ENST00000263966 DEF6Q9H4E7 631 aa19.62■□□□□ 0.73
USP13-201ENST00000263966 NUTM2BA6NNL0 878 aaPredicted RBP19.62■□□□□ 0.73
USP13-201ENST00000263966 NUTM2EB1AL46 878 aaPredicted RBP19.62■□□□□ 0.73
USP13-201ENST00000263966 HSP90AA2PQ14568 343 aaPredicted RBP19.62■□□□□ 0.73
USP13-201ENST00000263966 NUTM2AQ8IVF1 878 aaPredicted RBP19.62■□□□□ 0.73
USP13-201ENST00000263966 HOMER2Q9NSB8 354 aa19.61■□□□□ 0.73
USP13-201ENST00000263966 SEPT11Q9NVA2 429 aaKnown RBP19.61■□□□□ 0.73
USP13-201ENST00000263966 CCDC181Q5TID7 509 aa19.61■□□□□ 0.73
USP13-201ENST00000263966 CETN2P41208 172 aa19.61■□□□□ 0.73
USP13-201ENST00000263966 CCDC30Q5VVM6 783 aa19.61■□□□□ 0.73
USP13-201ENST00000263966 CLASRPQ8N2M8 674 aaKnown RBP19.61■□□□□ 0.73
USP13-201ENST00000263966 IBSPP21815 317 aaPredicted RBP19.61■□□□□ 0.73
USP13-201ENST00000263966 ZNF396Q96N95 335 aaPredicted RBP19.61■□□□□ 0.73
USP13-201ENST00000263966 TTLL5Q6EMB2 1281 aa19.6■□□□□ 0.73
USP13-201ENST00000263966 PPP1R12BO60237 982 aaPredicted RBP19.6■□□□□ 0.73
USP13-201ENST00000263966 DACH1Q9UI36 760 aa19.6■□□□□ 0.73
USP13-201ENST00000263966 LETM1O95202 739 aaPredicted RBP19.6■□□□□ 0.73
USP13-201ENST00000263966 TATP17735 454 aaPredicted RBP19.6■□□□□ 0.73
USP13-201ENST00000263966 CCDC112Q8NEF3 446 aa19.59■□□□□ 0.73
USP13-201ENST00000263966 FAM161AQ3B820 660 aa19.59■□□□□ 0.73
USP13-201ENST00000263966 IPO9Q96P70 1041 aaKnown RBP19.59■□□□□ 0.73
USP13-201ENST00000263966 CCDC91Q7Z6B0 441 aa19.59■□□□□ 0.73
USP13-201ENST00000263966 ZNF710Q8N1W2 664 aa19.59■□□□□ 0.73
USP13-201ENST00000263966 FSD1Q9BTV5 496 aa19.59■□□□□ 0.73
USP13-201ENST00000263966 STAMBPO95630 424 aa19.58■□□□□ 0.73
USP13-201ENST00000263966 CCDC69A6NI79 296 aa19.58■□□□□ 0.72
USP13-201ENST00000263966 IQCEQ6IPM2 695 aa19.58■□□□□ 0.72
USP13-201ENST00000263966 BCL2L13Q9BXK5 485 aa19.58■□□□□ 0.72
USP13-201ENST00000263966 PANK3Q9H999 370 aa19.58■□□□□ 0.72
USP13-201ENST00000263966 PIP4K2BP78356 416 aa19.58■□□□□ 0.72
USP13-201ENST00000263966 ESCO1Q5FWF5 840 aa19.58■□□□□ 0.72
USP13-201ENST00000263966 GAS2L2Q8NHY3 880 aa19.58■□□□□ 0.72
USP13-201ENST00000263966 INCENPQ9NQS7 918 aa19.57■□□□□ 0.72
USP13-201ENST00000263966 ZNF652Q9Y2D9 606 aa19.57■□□□□ 0.72
USP13-201ENST00000263966 JPH4Q96JJ6 628 aa19.57■□□□□ 0.72
USP13-201ENST00000263966 MYCNP04198 464 aaPredicted RBP19.57■□□□□ 0.72
USP13-201ENST00000263966 SKIDA1Q1XH10 827 aa19.57■□□□□ 0.72
USP13-201ENST00000263966 PABPN1LA6NDY0 278 aaKnown RBP19.56■□□□□ 0.72
USP13-201ENST00000263966 MPHOSPH6Q99547 160 aaKnown RBP19.56■□□□□ 0.72
USP13-201ENST00000263966 TANGO6Q9C0B7 1094 aa19.56■□□□□ 0.72
USP13-201ENST00000263966 WDR70Q9NW82 654 aa19.56■□□□□ 0.72
USP13-201ENST00000263966 SMC2O95347 1197 aa19.56■□□□□ 0.72
USP13-201ENST00000263966 TOM1L2Q6ZVM7 507 aa19.56■□□□□ 0.72
USP13-201ENST00000263966 CABP4P57796 275 aa19.56■□□□□ 0.72
USP13-201ENST00000263966 CCDC57Q2TAC2 916 aa19.55■□□□□ 0.72
USP13-201ENST00000263966 VPS8Q8N3P4 1428 aa19.55■□□□□ 0.72
USP13-201ENST00000263966 BRPF1P55201 1214 aaPredicted RBP19.55■□□□□ 0.72
USP13-201ENST00000263966 PROSER2Q86WR7 435 aaPredicted RBP19.54■□□□□ 0.72
USP13-201ENST00000263966 CT47B1P0C2W7 299 aaPredicted RBP19.54■□□□□ 0.72
USP13-201ENST00000263966 NLRP6P59044 892 aa19.54■□□□□ 0.72
USP13-201ENST00000263966 NOL7Q9UMY1 257 aaKnown RBP19.54■□□□□ 0.72
USP13-201ENST00000263966 DZIP1LQ8IYY4 767 aaKnown RBP19.54■□□□□ 0.72
USP13-201ENST00000263966 C16orf71Q8IYS4 520 aaPredicted RBP19.54■□□□□ 0.72
USP13-201ENST00000263966 MAP3K9P80192 1104 aa19.53■□□□□ 0.72
USP13-201ENST00000263966 JAKMIP3Q5VZ66 844 aa19.53■□□□□ 0.72
USP13-201ENST00000263966 EPB41L2O43491 1005 aaKnown RBP19.53■□□□□ 0.72
USP13-201ENST00000263966 SPG7Q9UQ90 795 aa19.53■□□□□ 0.72
USP13-201ENST00000263966 CDKL5O76039 1030 aa19.53■□□□□ 0.72
USP13-201ENST00000263966 PTPRGP23470 1445 aa19.52■□□□□ 0.72
USP13-201ENST00000263966 AXDND1Q5T1B0 1012 aaPredicted RBP19.52■□□□□ 0.72
USP13-201ENST00000263966 PPM1EQ8WY54 764 aa19.52■□□□□ 0.72
USP13-201ENST00000263966 DNAJC2Q99543 621 aaKnown RBP19.52■□□□□ 0.72
USP13-201ENST00000263966 RRBP1Q9P2E9 1410 aaKnown RBP19.52■□□□□ 0.71
USP13-201ENST00000263966 RAB3GAP2Q9H2M9 1393 aa19.51■□□□□ 0.71
USP13-201ENST00000263966 SEC63Q9UGP8 760 aaKnown RBP19.51■□□□□ 0.71
USP13-201ENST00000263966 ZPR1O75312 459 aa19.51■□□□□ 0.71
USP13-201ENST00000263966 ANKRD1Q15327 319 aa19.51■□□□□ 0.71
USP13-201ENST00000263966 TDRD9Q8NDG6 1382 aaKnown RBP19.51■□□□□ 0.71
USP13-201ENST00000263966 GIGYF2Q6Y7W6 1299 aaKnown RBP19.51■□□□□ 0.71
USP13-201ENST00000263966 SSR1P43307 286 aaKnown RBP19.51■□□□□ 0.71
USP13-201ENST00000263966 RUNDC1Q96C34 613 aa19.51■□□□□ 0.71
USP13-201ENST00000263966 GNAI3P08754 354 aa19.5■□□□□ 0.71
USP13-201ENST00000263966 CHMP4BP1P59074 171 aa19.5■□□□□ 0.71
USP13-201ENST00000263966 TSPYL1Q9H0U9 437 aa19.5■□□□□ 0.71
USP13-201ENST00000263966 PPFIBP1Q86W92 1011 aa19.5■□□□□ 0.71
USP13-201ENST00000263966 EHMT1Q9H9B1 1298 aa19.5■□□□□ 0.71
USP13-201ENST00000263966 AAMPQ13685 434 aa19.5■□□□□ 0.71
USP13-201ENST00000263966 ATP2B1P20020 1258 aa19.49■□□□□ 0.71
USP13-201ENST00000263966 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.49■□□□□ 0.71
USP13-201ENST00000263966 SSX2IPQ9Y2D8 614 aa19.49■□□□□ 0.71
USP13-201ENST00000263966 COMMD10Q9Y6G5 202 aa19.49■□□□□ 0.71
USP13-201ENST00000263966 NUTM2GQ5VZR2 741 aa19.48■□□□□ 0.71
USP13-201ENST00000263966 RBM19Q9Y4C8 960 aaKnown RBP19.48■□□□□ 0.71
USP13-201ENST00000263966 MCM2P49736 904 aa19.48■□□□□ 0.71
USP13-201ENST00000263966 RSPH6AQ9H0K4 717 aa19.48■□□□□ 0.71
USP13-201ENST00000263966 POGZQ7Z3K3 1410 aa19.48■□□□□ 0.71
USP13-201ENST00000263966 LEKR1Q6ZMV7 388 aa19.48■□□□□ 0.71
USP13-201ENST00000263966 ARHGAP5Q13017 1502 aa19.47■□□□□ 0.71
USP13-201ENST00000263966 KIAA0754O94854 1291 aa19.47■□□□□ 0.71
USP13-201ENST00000263966 FERMT1Q9BQL6 677 aa19.47■□□□□ 0.71
USP13-201ENST00000263966 RAPGEF2Q9Y4G8 1499 aa19.47■□□□□ 0.71
USP13-201ENST00000263966 IGHMBP2P38935 993 aaKnown RBP19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms