RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 CABP2Q9NPB3 220 aa22.99■■□□□ 1.27
USE1-201ENST00000263897 QRICH2Q9H0J4 1663 aa22.97■■□□□ 1.27
USE1-201ENST00000263897 TOPAZ1Q8N9V7 1692 aa22.96■■□□□ 1.27
USE1-201ENST00000263897 ABCA3Q99758 1704 aa22.96■■□□□ 1.27
USE1-201ENST00000263897 TONSLQ96HA7 1378 aa22.95■■□□□ 1.26
USE1-201ENST00000263897 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.95■■□□□ 1.26
USE1-201ENST00000263897 EVC2Q86UK5 1308 aa22.94■■□□□ 1.26
USE1-201ENST00000263897 PPIP5K1Q6PFW1 1433 aa22.92■■□□□ 1.26
USE1-201ENST00000263897 VPS72Q15906 364 aa22.92■■□□□ 1.26
USE1-201ENST00000263897 CABP1Q9NZU7 370 aa22.92■■□□□ 1.26
USE1-201ENST00000263897 NUTM2GQ5VZR2 741 aa22.9■■□□□ 1.26
USE1-201ENST00000263897 CARD11Q9BXL7 1154 aa22.9■■□□□ 1.26
USE1-201ENST00000263897 NWD2Q9ULI1 1742 aa22.9■■□□□ 1.26
USE1-201ENST00000263897 RALGAPBQ86X10 1494 aa22.9■■□□□ 1.26
USE1-201ENST00000263897 ABTB2Q8N961 1025 aa22.89■■□□□ 1.25
USE1-201ENST00000263897 BTG4Q9NY30 223 aa22.89■■□□□ 1.25
USE1-201ENST00000263897 PLCH1Q4KWH8 1693 aa22.89■■□□□ 1.25
USE1-201ENST00000263897 CRYBG1Q9Y4K1 1723 aa22.88■■□□□ 1.25
USE1-201ENST00000263897 CCDC9Q9Y3X0 531 aaKnown RBP22.87■■□□□ 1.25
USE1-201ENST00000263897 GLI3P10071 1580 aa22.87■■□□□ 1.25
USE1-201ENST00000263897 PRDM11Q9NQV5 511 aa22.86■■□□□ 1.25
USE1-201ENST00000263897 BRD4O60885 1362 aaPredicted RBP22.86■■□□□ 1.25
USE1-201ENST00000263897 ATAD2Q6PL18 1390 aa22.86■■□□□ 1.25
USE1-201ENST00000263897 ONECUT3O60422 494 aaPredicted RBP22.85■■□□□ 1.25
USE1-201ENST00000263897 COL14A1Q05707 1796 aaKnown RBP22.85■■□□□ 1.25
USE1-201ENST00000263897 ZC3H6P61129 1189 aaKnown RBP22.83■■□□□ 1.25
USE1-201ENST00000263897 NLRP13Q86W25 1043 aa22.83■■□□□ 1.25
USE1-201ENST00000263897 KIAA0232Q92628 1395 aa22.82■■□□□ 1.24
USE1-201ENST00000263897 SBNO2Q9Y2G9 1366 aa22.82■■□□□ 1.24
USE1-201ENST00000263897 SEPT12Q8IYM1 358 aa22.82■■□□□ 1.24
USE1-201ENST00000263897 ZNF692Q9BU19 519 aaPredicted RBP22.82■■□□□ 1.24
USE1-201ENST00000263897 CHRNA2Q15822 529 aa22.81■■□□□ 1.24
USE1-201ENST00000263897 USP6P35125 1406 aa22.81■■□□□ 1.24
USE1-201ENST00000263897 USP19O94966 1318 aa22.8■■□□□ 1.24
USE1-201ENST00000263897 NRAPQ86VF7 1730 aa22.79■■□□□ 1.24
USE1-201ENST00000263897 PHRF1Q9P1Y6 1649 aaKnown RBP22.79■■□□□ 1.24
USE1-201ENST00000263897 GCP02774 474 aa22.78■■□□□ 1.24
USE1-201ENST00000263897 SSH2Q76I76 1423 aa22.78■■□□□ 1.24
USE1-201ENST00000263897 NLRP6P59044 892 aa22.77■■□□□ 1.24
USE1-201ENST00000263897 SPATA31A5Q5VU36 1347 aa22.77■■□□□ 1.24
USE1-201ENST00000263897 SPATA31A7Q8IWB4 1347 aa22.77■■□□□ 1.24
USE1-201ENST00000263897 CCDC125Q86Z20 511 aa22.76■■□□□ 1.23
USE1-201ENST00000263897 BRWD3Q6RI45 1802 aa22.75■■□□□ 1.23
USE1-201ENST00000263897 FAM98CQ17RN3 349 aaKnown RBP22.75■■□□□ 1.23
USE1-201ENST00000263897 PCGF6Q9BYE7 350 aa22.75■■□□□ 1.23
USE1-201ENST00000263897 CPDO75976 1380 aa22.75■■□□□ 1.23
USE1-201ENST00000263897 TTC21BQ7Z4L5 1316 aa22.74■■□□□ 1.23
USE1-201ENST00000263897 CPSF1Q10570 1443 aaKnown RBP22.74■■□□□ 1.23
USE1-201ENST00000263897 KRT27Q7Z3Y8 459 aa22.73■■□□□ 1.23
USE1-201ENST00000263897 STRN4Q9NRL3 753 aa22.73■■□□□ 1.23
USE1-201ENST00000263897 NRKQ7Z2Y5 1582 aa22.72■■□□□ 1.23
USE1-201ENST00000263897 EVA1CP58658 441 aa22.72■■□□□ 1.23
USE1-201ENST00000263897 PUS7Q96PZ0 661 aaKnown RBP22.72■■□□□ 1.23
USE1-201ENST00000263897 ST20-MTHFSA0A0A6YYL1 179 aa22.71■■□□□ 1.23
USE1-201ENST00000263897 A0A0G2JS52 829 aa22.71■■□□□ 1.23
USE1-201ENST00000263897 MYT1Q01538 1121 aa22.71■■□□□ 1.23
USE1-201ENST00000263897 TIMELESSQ9UNS1 1208 aa22.71■■□□□ 1.23
USE1-201ENST00000263897 SPATA31A1Q5TZJ5 1347 aa22.71■■□□□ 1.23
USE1-201ENST00000263897 AKAP12Q02952 1782 aa22.71■■□□□ 1.23
USE1-201ENST00000263897 TESK2Q96S53 571 aa22.7■■□□□ 1.22
USE1-201ENST00000263897 TTC21AQ8NDW8 1320 aa22.7■■□□□ 1.22
USE1-201ENST00000263897 CLSPNQ9HAW4 1339 aa22.7■■□□□ 1.22
USE1-201ENST00000263897 KTN1Q86UP2 1357 aaKnown RBP22.7■■□□□ 1.22
USE1-201ENST00000263897 CAMTA1Q9Y6Y1 1673 aa22.69■■□□□ 1.22
USE1-201ENST00000263897 TMC1Q8TDI8 760 aa22.69■■□□□ 1.22
USE1-201ENST00000263897 SLC24A1O60721 1099 aa22.68■■□□□ 1.22
USE1-201ENST00000263897 SLC12A5Q9H2X9 1139 aa22.68■■□□□ 1.22
USE1-201ENST00000263897 PIK3C2AO00443 1686 aa22.67■■□□□ 1.22
USE1-201ENST00000263897 SLIT3O75094 1523 aa22.67■■□□□ 1.22
USE1-201ENST00000263897 LARP1Q6PKG0 1096 aaKnown RBP22.66■■□□□ 1.22
USE1-201ENST00000263897 LMO7Q8WWI1 1683 aa22.65■■□□□ 1.22
USE1-201ENST00000263897 KCNH5Q8NCM2 988 aa22.65■■□□□ 1.22
USE1-201ENST00000263897 BLMP54132 1417 aaPredicted RBP22.65■■□□□ 1.22
USE1-201ENST00000263897 ZBTB7CA1YPR0 619 aa22.64■■□□□ 1.21
USE1-201ENST00000263897 HDGFL2Q7Z4V5 671 aaPredicted RBP22.64■■□□□ 1.21
USE1-201ENST00000263897 USP35Q9P2H5 1018 aa22.64■■□□□ 1.21
USE1-201ENST00000263897 CD163L1Q9NR16 1453 aa22.64■■□□□ 1.21
USE1-201ENST00000263897 AATKQ6ZMQ8 1374 aa22.63■■□□□ 1.21
USE1-201ENST00000263897 BARGINQ6ZT62 677 aa22.63■■□□□ 1.21
USE1-201ENST00000263897 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.63■■□□□ 1.21
USE1-201ENST00000263897 TERF2IPQ9NYB0 399 aa22.63■■□□□ 1.21
USE1-201ENST00000263897 EP400Q96L91 3159 aa22.63■■□□□ 1.21
USE1-201ENST00000263897 ARHGEF25Q86VW2 580 aa22.62■■□□□ 1.21
USE1-201ENST00000263897 MON2Q7Z3U7 1717 aa22.61■■□□□ 1.21
USE1-201ENST00000263897 TCP11L2Q8N4U5 519 aa22.61■■□□□ 1.21
USE1-201ENST00000263897 THSD7AQ9UPZ6 1657 aa22.61■■□□□ 1.21
USE1-201ENST00000263897 SF3B2Q13435 895 aaKnown RBP22.6■■□□□ 1.21
USE1-201ENST00000263897 ZRANB1Q9UGI0 708 aa22.6■■□□□ 1.21
USE1-201ENST00000263897 FAM182BQ5T319 152 aa22.59■■□□□ 1.21
USE1-201ENST00000263897 AXIN2Q9Y2T1 843 aa22.59■■□□□ 1.21
USE1-201ENST00000263897 THRAP3Q9Y2W1 955 aaKnown RBP22.59■■□□□ 1.21
USE1-201ENST00000263897 USP31Q70CQ4 1352 aa22.59■■□□□ 1.21
USE1-201ENST00000263897 USP47Q96K76 1375 aa22.59■■□□□ 1.21
USE1-201ENST00000263897 COL5A2P05997 1499 aaPredicted RBP22.59■■□□□ 1.21
USE1-201ENST00000263897 SOX12O15370 315 aa22.58■■□□□ 1.21
USE1-201ENST00000263897 NME9Q86XW9 330 aa22.58■■□□□ 1.21
USE1-201ENST00000263897 COL18A1P39060 1754 aa22.58■■□□□ 1.2
USE1-201ENST00000263897 A0A1W2PP64 1363 aa22.56■■□□□ 1.2
USE1-201ENST00000263897 NINLQ9Y2I6 1382 aa22.56■■□□□ 1.2
USE1-201ENST00000263897 TMF1P82094 1093 aa22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms