RNA–Protein interactions for RNA: ENST00000263834.9

GREB1-202, Transcript of growth regulating estrogen receptor binding 1, humanhuman

TSL 1 (best) BASIC

Gene GREB1, Length 2,448 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GREB1-202ENST00000263834 PPP4R2Q9NY27 417 aa13.76□□□□□ -0.21
GREB1-202ENST00000263834 LRRC59Q96AG4 307 aaKnown RBP13.76□□□□□ -0.21
GREB1-202ENST00000263834 CABP1Q9NZU7 370 aa13.76□□□□□ -0.21
GREB1-202ENST00000263834 PPIP5K1Q6PFW1 1433 aa13.76□□□□□ -0.21
GREB1-202ENST00000263834 ANO8Q9HCE9 1232 aaPredicted RBP13.75□□□□□ -0.21
GREB1-202ENST00000263834 ATAD2Q6PL18 1390 aa13.75□□□□□ -0.21
GREB1-202ENST00000263834 KIF1AQ12756 1690 aa13.75□□□□□ -0.21
GREB1-202ENST00000263834 KRT28Q7Z3Y7 464 aa13.75□□□□□ -0.21
GREB1-202ENST00000263834 SOS2Q07890 1332 aaPredicted RBP13.75□□□□□ -0.21
GREB1-202ENST00000263834 NHSL1Q5SYE7 1610 aa13.75□□□□□ -0.21
GREB1-202ENST00000263834 TMC1Q8TDI8 760 aa13.74□□□□□ -0.21
GREB1-202ENST00000263834 PLEKHG3A1L390 1219 aa13.74□□□□□ -0.21
GREB1-202ENST00000263834 CDCA8Q53HL2 280 aa13.74□□□□□ -0.21
GREB1-202ENST00000263834 ACEP12821 1306 aa13.74□□□□□ -0.21
GREB1-202ENST00000263834 DISP3Q9P2K9 1392 aa13.73□□□□□ -0.21
GREB1-202ENST00000263834 ITSN1Q15811 1721 aa13.73□□□□□ -0.21
GREB1-202ENST00000263834 COL16A1Q07092 1604 aaPredicted RBP13.73□□□□□ -0.21
GREB1-202ENST00000263834 PUS7Q96PZ0 661 aaKnown RBP13.72□□□□□ -0.21
GREB1-202ENST00000263834 JCADQ9P266 1359 aa13.72□□□□□ -0.21
GREB1-202ENST00000263834 PXDNQ92626 1479 aa13.72□□□□□ -0.21
GREB1-202ENST00000263834 ZBED9Q6R2W3 1325 aa13.72□□□□□ -0.21
GREB1-202ENST00000263834 FANCIQ9NVI1 1328 aa13.72□□□□□ -0.21
GREB1-202ENST00000263834 PAK3O75914 559 aaPredicted RBP13.71□□□□□ -0.21
GREB1-202ENST00000263834 LMOD2Q6P5Q4 547 aa13.71□□□□□ -0.21
GREB1-202ENST00000263834 TOPAZ1Q8N9V7 1692 aa13.71□□□□□ -0.22
GREB1-202ENST00000263834 POLR3AO14802 1390 aaPredicted RBP13.7□□□□□ -0.22
GREB1-202ENST00000263834 SLC12A5Q9H2X9 1139 aa13.7□□□□□ -0.22
GREB1-202ENST00000263834 SPATA31A3Q5VYP0 1347 aa13.69□□□□□ -0.22
GREB1-202ENST00000263834 PKNOX2Q96KN3 472 aa13.68□□□□□ -0.22
GREB1-202ENST00000263834 ARXQ96QS3 562 aa13.68□□□□□ -0.22
GREB1-202ENST00000263834 ZNF692Q9BU19 519 aaPredicted RBP13.68□□□□□ -0.22
GREB1-202ENST00000263834 SBNO1A3KN83 1393 aa13.68□□□□□ -0.22
GREB1-202ENST00000263834 HDGFL2Q7Z4V5 671 aaPredicted RBP13.68□□□□□ -0.22
GREB1-202ENST00000263834 TERF2IPQ9NYB0 399 aa13.68□□□□□ -0.22
GREB1-202ENST00000263834 TNS3Q68CZ2 1445 aa13.67□□□□□ -0.22
GREB1-202ENST00000263834 PNPLA6Q8IY17 1366 aa13.67□□□□□ -0.22
GREB1-202ENST00000263834 NINLQ9Y2I6 1382 aa13.67□□□□□ -0.22
GREB1-202ENST00000263834 NUTM2BA6NNL0 878 aaPredicted RBP13.66□□□□□ -0.22
GREB1-202ENST00000263834 NUTM2EB1AL46 878 aaPredicted RBP13.66□□□□□ -0.22
GREB1-202ENST00000263834 NUTM2AQ8IVF1 878 aaPredicted RBP13.66□□□□□ -0.22
GREB1-202ENST00000263834 SPATA31A6Q5VVP1 1343 aa13.66□□□□□ -0.22
GREB1-202ENST00000263834 KTN1Q86UP2 1357 aaKnown RBP13.66□□□□□ -0.22
GREB1-202ENST00000263834 USP6P35125 1406 aa13.65□□□□□ -0.22
GREB1-202ENST00000263834 ARHGEF10O15013 1369 aa13.65□□□□□ -0.22
GREB1-202ENST00000263834 ABTB2Q8N961 1025 aa13.64□□□□□ -0.23
GREB1-202ENST00000263834 CPSF1Q10570 1443 aaKnown RBP13.64□□□□□ -0.23
GREB1-202ENST00000263834 HAP1P54257 671 aaPredicted RBP13.64□□□□□ -0.23
GREB1-202ENST00000263834 ERICH6BQ5W0A0 696 aa13.64□□□□□ -0.23
GREB1-202ENST00000263834 SHPRHQ149N8 1683 aa13.64□□□□□ -0.23
GREB1-202ENST00000263834 NUTM2GQ5VZR2 741 aa13.63□□□□□ -0.23
GREB1-202ENST00000263834 A0A1W2PP64 1363 aa13.63□□□□□ -0.23
GREB1-202ENST00000263834 BRD4O60885 1362 aaPredicted RBP13.63□□□□□ -0.23
GREB1-202ENST00000263834 MEX3CQ5U5Q3 659 aaKnown RBP13.63□□□□□ -0.23
GREB1-202ENST00000263834 CD163L1Q9NR16 1453 aa13.63□□□□□ -0.23
GREB1-202ENST00000263834 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.62□□□□□ -0.232e-7■■■□□ 16.2
GREB1-202ENST00000263834 CABLES1Q8TDN4 633 aa13.62□□□□□ -0.23
GREB1-202ENST00000263834 SALL2Q9Y467 1007 aaPredicted RBP13.62□□□□□ -0.23
GREB1-202ENST00000263834 TRPM3Q9HCF6 1732 aaPredicted RBP13.62□□□□□ -0.23
GREB1-202ENST00000263834 TTC21BQ7Z4L5 1316 aa13.61□□□□□ -0.23
GREB1-202ENST00000263834 ADAMTS2O95450 1211 aa13.61□□□□□ -0.23
GREB1-202ENST00000263834 ANKRD36BQ8N2N9 1353 aa13.61□□□□□ -0.23
GREB1-202ENST00000263834 NBR1Q14596 966 aa13.61□□□□□ -0.23
GREB1-202ENST00000263834 NLRP6P59044 892 aa13.6□□□□□ -0.23
GREB1-202ENST00000263834 TTC21AQ8NDW8 1320 aa13.6□□□□□ -0.23
GREB1-202ENST00000263834 NLRP13Q86W25 1043 aa13.6□□□□□ -0.23
GREB1-202ENST00000263834 CCDC136Q96JN2 1154 aa13.6□□□□□ -0.23
GREB1-202ENST00000263834 SSH2Q76I76 1423 aa13.6□□□□□ -0.23
GREB1-202ENST00000263834 AKAP12Q02952 1782 aa13.59□□□□□ -0.23
GREB1-202ENST00000263834 NUDCQ9Y266 331 aa13.59□□□□□ -0.23
GREB1-202ENST00000263834 EDC4Q6P2E9 1401 aaKnown RBP13.59□□□□□ -0.23
GREB1-202ENST00000263834 MED1Q15648 1581 aaPredicted RBP13.59□□□□□ -0.23
GREB1-202ENST00000263834 LRP6O75581 1613 aa13.59□□□□□ -0.23
GREB1-202ENST00000263834 COL22A1Q8NFW1 1626 aaPredicted RBP13.59□□□□□ -0.23
GREB1-202ENST00000263834 ALS2Q96Q42 1657 aa13.59□□□□□ -0.23
GREB1-202ENST00000263834 PHF23Q9BUL5 403 aaPredicted RBP13.59□□□□□ -0.23
GREB1-202ENST00000263834 C8orf37Q96NL8 207 aa13.58□□□□□ -0.24
GREB1-202ENST00000263834 NME9Q86XW9 330 aa13.57□□□□□ -0.24
GREB1-202ENST00000263834 MON2Q7Z3U7 1717 aa13.57□□□□□ -0.24
GREB1-202ENST00000263834 PANK3Q9H999 370 aa13.56□□□□□ -0.24
GREB1-202ENST00000263834 MYOM1P52179 1685 aa13.56□□□□□ -0.24
GREB1-202ENST00000263834 NGLY1Q96IV0 654 aa13.56□□□□□ -0.24
GREB1-202ENST00000263834 SMG6Q86US8 1419 aaKnown RBP13.56□□□□□ -0.24
GREB1-202ENST00000263834 PNISRQ8TF01 805 aaKnown RBP13.55□□□□□ -0.24
GREB1-202ENST00000263834 CARD14Q9BXL6 1004 aa13.55□□□□□ -0.24
GREB1-202ENST00000263834 NRKQ7Z2Y5 1582 aa13.55□□□□□ -0.24
GREB1-202ENST00000263834 ZRANB1Q9UGI0 708 aa13.55□□□□□ -0.24
GREB1-202ENST00000263834 SOX12O15370 315 aa13.54□□□□□ -0.24
GREB1-202ENST00000263834 GCP02774 474 aa13.54□□□□□ -0.24
GREB1-202ENST00000263834 NSD3Q9BZ95 1437 aa13.54□□□□□ -0.24
GREB1-202ENST00000263834 ZC3H6P61129 1189 aaKnown RBP13.54□□□□□ -0.24
GREB1-202ENST00000263834 PIK3C2AO00443 1686 aa13.54□□□□□ -0.24
GREB1-202ENST00000263834 USP19O94966 1318 aa13.53□□□□□ -0.24
GREB1-202ENST00000263834 NOP58Q9Y2X3 529 aaKnown RBP13.53□□□□□ -0.24
GREB1-202ENST00000263834 COG3Q96JB2 828 aa13.53□□□□□ -0.24
GREB1-202ENST00000263834 FYB1O15117 783 aa13.52□□□□□ -0.24
GREB1-202ENST00000263834 KCNH5Q8NCM2 988 aa13.52□□□□□ -0.24
GREB1-202ENST00000263834 GGNBP2Q9H3C7 697 aa13.52□□□□□ -0.24
GREB1-202ENST00000263834 PRDM11Q9NQV5 511 aa13.52□□□□□ -0.24
GREB1-202ENST00000263834 CGNL1Q0VF96 1302 aa13.52□□□□□ -0.25
GREB1-202ENST00000263834 KLHL34Q8N239 644 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms